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BioLiP
Download all results in tab-seperated text for 832530 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    803201 8pl3:A (1.65) BS03 ZMI 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803202 8pl3:B (1.65) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803203 8pl3:B (1.65) BS02 ZMI 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803204 8pl4:A (1.97) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803205 8pl4:A (1.97) BS02 ZMC 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803206 8pl4:A (1.97) BS03 ZMC 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803207 8pl4:B (1.97) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803208 8pl4:B (1.97) BS02 ZMC 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803209 8pl5:A (2.15) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803210 8pl5:A (2.15) BS02 ZM8 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803211 8pl5:A (2.15) BS03 ZM8 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803212 8pl5:B (2.15) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803213 8pl5:B (2.15) BS02 ZM8 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803214 8pl5:B (2.15) BS03 ZM8 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803215 8pl6:A (1.81) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803216 8pl6:A (1.81) BS02 ZLX 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803217 8pl6:A (1.81) BS03 ZLX 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803218 8pl7:A (1.77) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803219 8pl7:A (1.77) BS02 ZLT 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803220 8pl7:B (1.77) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803221 8pl7:B (1.77) BS02 ZLT 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803222 8pl7:B (1.77) BS03 ZLT 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803223 8pl8:A (2.35) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803224 8pl8:A (2.35) BS02 ZLO 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803225 8pl8:A (2.35) BS03 ZLO 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803226 8pl9:A (1.98) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803227 8pl9:A (1.98) BS02 O3D 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803228 8pl9:B (1.98) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803229 8pl9:B (1.98) BS02 O3D 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803230 8pla:A (1.66) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803231 8pla:A (1.66) BS02 ZLI 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803232 8pla:B (1.66) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803233 8plb:A (2.0) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803234 8plb:A (2.0) BS02 VWY 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803235 8plb:B (2.0) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803236 8plb:B (2.0) BS02 VWY 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803237 8plc:A (2.34) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803238 8plc:A (2.34) BS02 A7N 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803239 8plc:B (2.34) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803240 8plc:B (2.34) BS02 A7N 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803241 8pld:A (1.85) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803242 8pld:A (1.85) BS02 T9Q 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803243 8pld:A (1.85) BS03 T9Q 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803244 8pld:B (1.85) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803245 8pld:B (1.85) BS02 T9Q 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803246 8pld:B (1.85) BS03 T9Q 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803247 8ple:A (1.94) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803248 8ple:A (1.94) BS02 VZS 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803249 8ple:A (1.94) BS03 VZS 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803250 8ple:A (1.94) BS04 VZS 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803251 8ple:B (1.94) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803252 8ple:B (1.94) BS02 VZS 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803253 8plf:A (1.95) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803254 8plf:A (1.95) BS02 NZ1 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803255 8plf:A (1.95) BS03 NZ1 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803256 8plf:B (1.95) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803257 8plf:B (1.95) BS02 NZ1 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803258 8plg:A (1.75) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803259 8plg:A (1.75) BS02 YI6 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803260 8plh:A (1.62) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803261 8plh:A (1.62) BS02 GVY 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803262 8plh:A (1.62) BS03 GVY 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803263 8pli:A (2.33) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803264 8pli:A (2.33) BS02 WZY 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803265 8pli:B (2.33) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803266 8plj:A (2.18) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803267 8plj:A (2.18) BS02 ZP8 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803268 8plj:B (2.18) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803269 8plj:B (2.18) BS02 ZP8 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803270 8plk:A (1.82) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803271 8plk:A (1.82) BS02 JO1 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803272 8plk:A (1.82) BS03 JO1 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803273 8plk:B (1.82) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803274 8plk:B (1.82) BS02 JO1 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803275 8plk:B (1.82) BS03 JO1 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803276 8pll:A (1.85) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803277 8pll:A (1.85) BS02 AYV 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803278 8plm:A (1.95) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803279 8plm:A (1.95) BS02 JJ7 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803280 8plm:A (1.95) BS03 JJ7 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803281 8pln:A (2.8) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803282 8pln:A (2.8) BS02 ZPI 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803283 8plo:A (1.74) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803284 8plo:A (1.74) BS02 WLY 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803285 8plo:A (1.74) BS03 WLY 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803286 8plo:B (1.74) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803287 8plo:B (1.74) BS02 WLY 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803288 8plp:A (2.28) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803289 8plp:A (2.28) BS02 WO1 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803290 8plp:B (2.28) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803291 8plp:B (2.28) BS02 WO1 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803292 8plq:A (2.29) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803293 8plq:B (2.29) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803294 8plq:B (2.29) BS02 TEK 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803295 8plr:A (2.72) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803296 8plr:A (2.72) BS02 MJ4 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803297 8plr:B (2.72) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803298 8pls:A (1.8) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803299 8pls:A (1.8) BS02 B0M 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803300 8pls:B (1.8) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803301 8pls:B (1.8) BS02 B0M 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803302 8plt:A (2.33) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803303 8plt:A (2.33) BS02 NVD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803304 8plt:B (2.33) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803305 8plu:A (2.04) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803306 8plu:A (2.04) BS02 ZPU 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803307 8plu:A (2.04) BS03 ZPU 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803308 8plu:B (2.04) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803309 8plu:B (2.04) BS02 ZPU 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803310 8plu:B (2.04) BS03 ZPU 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803311 8plv:A (2.46) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803312 8plv:A (2.46) BS02 UXG 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803313 8plv:B (2.46) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803314 8plv:B (2.46) BS02 UXG 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803315 8plw:A (1.78) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803316 8plw:A (1.78) BS02 Q4L 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803317 8plw:A (1.78) BS03 Q4L 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803318 8plw:B (1.78) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803319 8plw:B (1.78) BS02 Q4L 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803320 8plx:A (1.77) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803321 8plx:A (1.77) BS02 O1M 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803322 8plx:B (1.77) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803323 8plx:B (1.77) BS02 O1M 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803324 8ply:A (2.43) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803325 8ply:B (2.43) BS01 FAD 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803326 8ply:B (2.43) BS02 JKG 1.8.1.9 GO:0000166 ... Q962Y6 38238498
    803327 8plz:J (1.9) BS01 ZQ6 2.7.11.22
    2.7.11.23    		 GO:0000307 ... P50613 38480681
    803328 8pm0:A (2.9) BS01 rna 3.1.-.- GO:0003723 ... M9TI86 38316757
    803329 8pm0:A (2.9) BS02 peptide 3.1.-.- GO:0003723 ... M9TI86 38316757
    803330 8pm0:A (2.9) BS03 peptide 3.1.-.- GO:0003723 ... M9TI86 38316757
    803331 8pm0:B (2.9) BS01 rna 2.7.7.48 GO:0000166 ... M9TLW3 38316757
    803332 8pm0:B (2.9) BS02 MG 2.7.7.48 GO:0000166 ... M9TLW3 38316757
    803333 8pm0:C (2.9) BS01 rna ? GO:0001172 ... X5F427 38316757
    803334 8pm1:A (1.5) BS01 FMN 2.7.13.3 N/A B8GAY9 38038877
    803335 8pm1:B (1.5) BS01 FMN 2.7.13.3 N/A B8GAY9 38038877
    803336 8pm2:R (2.92) BS01 8IA ? GO:0001594 ... Q5QD08 37461561
    803337 8pm2:R (2.92) BS02 Y01 ? GO:0001594 ... Q5QD08 37461561
    803338 8pm3:A (2.0) BS01 ZLE 2.7.12.2 GO:0004672 ... P52564 N/A
    803339 8pm3:B (2.0) BS01 ZLE 2.7.12.2 GO:0004672 ... P52564 N/A
    803340 8pm3:C (2.0) BS01 ZLE 2.7.12.2 GO:0004672 ... P52564 N/A
    803341 8pm3:D (2.0) BS01 ZLE 2.7.12.2 GO:0004672 ... P52564 N/A
    803342 8pm4:A (2.93) BS01 rna ? GO:0003677 ... H5TRP0 38261981
    803343 8pm4:A (2.93) BS02 dna ? GO:0003677 ... H5TRP0 38261981
    803344 8pm4:A (2.93) BS03 dna ? GO:0003677 ... H5TRP0 38261981
    803345 8pm6:A (3.22) BS01 CLR 7.6.2.- GO:0000139 ... O95342 37949847
    803346 8pm6:A (3.22) BS02 CLR 7.6.2.- GO:0000139 ... O95342 37949847
    803347 8pm6:A (3.22) BS03 CLR 7.6.2.- GO:0000139 ... O95342 37949847
    803348 8pm6:A (3.22) BS04 CLR 7.6.2.- GO:0000139 ... O95342 37949847
    803349 8pm6:A (3.22) BS05 CLR 7.6.2.- GO:0000139 ... O95342 37949847
    803350 8pm6:A (3.22) BS06 CLR 7.6.2.- GO:0000139 ... O95342 37949847
    803351 8pm6:A (3.22) BS07 CLR 7.6.2.- GO:0000139 ... O95342 37949847
    803352 8pm6:A (3.22) BS08 GBM 7.6.2.- GO:0000139 ... O95342 37949847
    803353 8pm8:A (1.57) BS01 TCW ? GO:0005179 ... P02766 37837673
    803354 8pm8:B (1.57) BS01 TCW ? GO:0005179 ... P02766 37837673
    803355 8pm9:A (1.85) BS01 ZP2 ? GO:0005179 ... P02766 37837673
    803356 8pm9:B (1.85) BS01 ZP2 ? GO:0005179 ... P02766 37837673
    803357 8pma:A (1.2) BS01 ZP2 ? GO:0005179 ... P02766 37837673
    803358 8pma:B (1.2) BS01 ZP2 ? GO:0005179 ... P02766 37837673
    803359 8pmd:A (2.95) BS01 ATP 7.6.2.- GO:0000139 ... O95342 37949847
    803360 8pmd:A (2.95) BS02 ATP 7.6.2.- GO:0000139 ... O95342 37949847
    803361 8pmd:A (2.95) BS03 MG 7.6.2.- GO:0000139 ... O95342 37949847
    803362 8pmd:A (2.95) BS04 MG 7.6.2.- GO:0000139 ... O95342 37949847
    803363 8pme:A (2.15) BS01 ATP ? N/A A0A8K1DE77 38600265
    803364 8pme:A (2.15) BS02 MG ? N/A A0A8K1DE77 38600265
    803365 8pme:B (2.15) BS01 ATP ? N/A A0A8K1DE77 38600265
    803366 8pme:B (2.15) BS02 MG ? N/A A0A8K1DE77 38600265
    803367 8pme:C (2.15) BS01 ATP ? N/A A0A8K1DE77 38600265
    803368 8pme:C (2.15) BS02 MG ? N/A A0A8K1DE77 38600265
    803369 8pmg:A (3.29) BS01 ATP ? N/A B4XT64 38600265
    803370 8pmg:A (3.29) BS02 MG ? N/A B4XT64 38600265
    803371 8pmg:B (3.29) BS01 ATP ? N/A B4XT64 38600265
    803372 8pmg:B (3.29) BS02 MG ? N/A B4XT64 38600265
    803373 8pmg:C (3.29) BS01 ATP ? N/A B4XT64 38600265
    803374 8pmg:C (3.29) BS02 MG ? N/A B4XT64 38600265
    803375 8pmg:D (3.29) BS01 ATP ? N/A B4XT64 38600265
    803376 8pmg:D (3.29) BS02 MG ? N/A B4XT64 38600265
    803377 8pmg:E (3.29) BS01 ATP ? N/A B4XT64 38600265
    803378 8pmg:E (3.29) BS02 MG ? N/A B4XT64 38600265
    803379 8pmg:F (3.29) BS01 ATP ? N/A B4XT64 38600265
    803380 8pmg:F (3.29) BS02 MG ? N/A B4XT64 38600265
    803381 8pmi:A (2.83) BS01 ATP ? N/A B4XT64 38600265
    803382 8pmi:A (2.83) BS02 MG ? N/A B4XT64 38600265
    803383 8pmi:B (2.83) BS01 ATP ? N/A B4XT64 38600265
    803384 8pmi:B (2.83) BS02 MG ? N/A B4XT64 38600265
    803385 8pmi:C (2.83) BS01 ATP ? N/A B4XT64 38600265
    803386 8pmi:C (2.83) BS02 MG ? N/A B4XT64 38600265
    803387 8pmi:D (2.83) BS01 ATP ? N/A B4XT64 38600265
    803388 8pmi:D (2.83) BS02 MG ? N/A B4XT64 38600265
    803389 8pmi:E (2.83) BS01 ATP ? N/A B4XT64 38600265
    803390 8pmi:E (2.83) BS02 MG ? N/A B4XT64 38600265
    803391 8pmi:F (2.83) BS01 ATP ? N/A B4XT64 38600265
    803392 8pmi:F (2.83) BS02 MG ? N/A B4XT64 38600265
    803393 8pmj:A (2.81) BS01 ATP 7.6.2.- GO:0000139 ... O95342 37949847
    803394 8pmj:A (2.81) BS02 CLR 7.6.2.- GO:0000139 ... O95342 37949847
    803395 8pmj:A (2.81) BS03 CLR 7.6.2.- GO:0000139 ... O95342 37949847
    803396 8pmj:A (2.81) BS04 ADP 7.6.2.- GO:0000139 ... O95342 37949847
    803397 8pmj:A (2.81) BS05 VO4 7.6.2.- GO:0000139 ... O95342 37949847
    803398 8pmj:A (2.81) BS06 MG 7.6.2.- GO:0000139 ... O95342 37949847
    803399 8pmj:A (2.81) BS07 MG 7.6.2.- GO:0000139 ... O95342 37949847
    803400 8pml:A (2.95) BS01 ATP ? N/A B4XT64 38600265
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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