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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 832530 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    790201 8j5k:C (2.93) BS11 CLA ? GO:0005737 ... A0A8F5GHI6 38071196
    790202 8j5k:C (2.93) BS12 CLA ? GO:0005737 ... A0A8F5GHI6 38071196
    790203 8j5k:C (2.93) BS13 CLA ? GO:0005737 ... A0A8F5GHI6 38071196
    790204 8j5k:C (2.93) BS14 CLA ? GO:0005737 ... A0A8F5GHI6 38071196
    790205 8j5k:D (2.93) BS01 FE2 1.10.3.9 GO:0005506 ... A0A679C012 38071196
    790206 8j5k:D (2.93) BS02 CLA 1.10.3.9 GO:0005506 ... A0A679C012 38071196
    790207 8j5k:D (2.93) BS03 PHO 1.10.3.9 GO:0005506 ... A0A679C012 38071196
    790208 8j5k:D (2.93) BS04 PHO 1.10.3.9 GO:0005506 ... A0A679C012 38071196
    790209 8j5k:D (2.93) BS05 CLA 1.10.3.9 GO:0005506 ... A0A679C012 38071196
    790210 8j5k:D (2.93) BS06 CLA 1.10.3.9 GO:0005506 ... A0A679C012 38071196
    790211 8j5k:D (2.93) BS07 BCT 1.10.3.9 GO:0005506 ... A0A679C012 38071196
    790212 8j5k:D (2.93) BS08 CLA 1.10.3.9 GO:0005506 ... A0A679C012 38071196
    790213 8j5k:D (2.93) BS09 CLA 1.10.3.9 GO:0005506 ... A0A679C012 38071196
    790214 8j5k:E (2.93) BS01 HEM ? GO:0009523 ... A0A679C209 38071196
    790215 8j5k:F (2.93) BS01 HEM ? GO:0009523 ... A0T0U1 38071196
    790216 8j5k:H (2.93) BS01 CLA ? GO:0009507 ... B7XBY7 38071196
    790217 8j5k:H (2.93) BS02 CLA ? GO:0009507 ... B7XBY7 38071196
    790218 8j5k:H (2.93) BS03 CLA ? GO:0009507 ... B7XBY7 38071196
    790219 8j5k:H (2.93) BS04 CLA ? GO:0009507 ... B7XBY7 38071196
    790220 8j5k:I (2.93) BS01 CLA ? GO:0009523 ... A0A679BVT8 38071196
    790221 8j5k:K (2.93) BS01 CLA ? GO:0009523 ... A0A2H5N031 38071196
    790222 8j5k:L (2.93) BS01 peptide ? GO:0005737 ... A0A151DYG7 38071196
    790223 8j5k:M (2.93) BS01 peptide ? GO:0009523 ... A0A679C2A0 38071196
    790224 8j5k:P (2.93) BS01 CLA ? GO:0009416 ... B8BUU4 38071196
    790225 8j5k:P (2.93) BS02 CLA ? GO:0009416 ... B8BUU4 38071196
    790226 8j5k:P (2.93) BS03 CLA ? GO:0009416 ... B8BUU4 38071196
    790227 8j5k:P (2.93) BS04 CLA ? GO:0009416 ... B8BUU4 38071196
    790228 8j5k:P (2.93) BS05 CLA ? GO:0009416 ... B8BUU4 38071196
    790229 8j5k:P (2.93) BS06 CLA ? GO:0009416 ... B8BUU4 38071196
    790230 8j5k:P (2.93) BS07 CLA ? GO:0009416 ... B8BUU4 38071196
    790231 8j5k:P (2.93) BS08 CLA ? GO:0009416 ... B8BUU4 38071196
    790232 8j5k:P (2.93) BS09 A86 ? GO:0009416 ... B8BUU4 38071196
    790233 8j5k:P (2.93) BS10 DD6 ? GO:0009416 ... B8BUU4 38071196
    790234 8j5k:V (2.93) BS01 HEM ? GO:0005506 ... A0A8F5GGT9 38071196
    790235 8j5k:Z (2.93) BS01 CLA ? GO:0009523 ... A0T0T3 38071196
    790236 8j5k:a (2.93) BS01 peptide 1.10.3.9 GO:0005506 ... A0A8F5GJ32 38071196
    790237 8j5k:a (2.93) BS02 OEX 1.10.3.9 GO:0005506 ... A0A8F5GJ32 38071196
    790238 8j5k:a (2.93) BS03 FE2 1.10.3.9 GO:0005506 ... A0A8F5GJ32 38071196
    790239 8j5k:a (2.93) BS04 CLA 1.10.3.9 GO:0005506 ... A0A8F5GJ32 38071196
    790240 8j5k:a (2.93) BS05 CLA 1.10.3.9 GO:0005506 ... A0A8F5GJ32 38071196
    790241 8j5k:a (2.93) BS06 PHO 1.10.3.9 GO:0005506 ... A0A8F5GJ32 38071196
    790242 8j5k:a (2.93) BS07 PHO 1.10.3.9 GO:0005506 ... A0A8F5GJ32 38071196
    790243 8j5k:a (2.93) BS08 CLA 1.10.3.9 GO:0005506 ... A0A8F5GJ32 38071196
    790244 8j5k:a (2.93) BS09 CLA 1.10.3.9 GO:0005506 ... A0A8F5GJ32 38071196
    790245 8j5k:b (2.93) BS01 CLA ? GO:0009507 ... A0A679C6E3 38071196
    790246 8j5k:b (2.93) BS02 CLA ? GO:0009507 ... A0A679C6E3 38071196
    790247 8j5k:b (2.93) BS03 CLA ? GO:0009507 ... A0A679C6E3 38071196
    790248 8j5k:b (2.93) BS04 CLA ? GO:0009507 ... A0A679C6E3 38071196
    790249 8j5k:b (2.93) BS05 CLA ? GO:0009507 ... A0A679C6E3 38071196
    790250 8j5k:b (2.93) BS06 CLA ? GO:0009507 ... A0A679C6E3 38071196
    790251 8j5k:b (2.93) BS07 CLA ? GO:0009507 ... A0A679C6E3 38071196
    790252 8j5k:b (2.93) BS08 CLA ? GO:0009507 ... A0A679C6E3 38071196
    790253 8j5k:b (2.93) BS09 CLA ? GO:0009507 ... A0A679C6E3 38071196
    790254 8j5k:b (2.93) BS10 CLA ? GO:0009507 ... A0A679C6E3 38071196
    790255 8j5k:b (2.93) BS11 CLA ? GO:0009507 ... A0A679C6E3 38071196
    790256 8j5k:b (2.93) BS12 CLA ? GO:0009507 ... A0A679C6E3 38071196
    790257 8j5k:b (2.93) BS13 CLA ? GO:0009507 ... A0A679C6E3 38071196
    790258 8j5k:b (2.93) BS14 CLA ? GO:0009507 ... A0A679C6E3 38071196
    790259 8j5k:b (2.93) BS15 CLA ? GO:0009507 ... A0A679C6E3 38071196
    790260 8j5k:b (2.93) BS16 CLA ? GO:0009507 ... A0A679C6E3 38071196
    790261 8j5k:c (2.93) BS01 OEX ? GO:0005737 ... A0A8F5GHI6 38071196
    790262 8j5k:c (2.93) BS02 CLA ? GO:0005737 ... A0A8F5GHI6 38071196
    790263 8j5k:c (2.93) BS03 CLA ? GO:0005737 ... A0A8F5GHI6 38071196
    790264 8j5k:c (2.93) BS04 CLA ? GO:0005737 ... A0A8F5GHI6 38071196
    790265 8j5k:c (2.93) BS05 CLA ? GO:0005737 ... A0A8F5GHI6 38071196
    790266 8j5k:c (2.93) BS06 CLA ? GO:0005737 ... A0A8F5GHI6 38071196
    790267 8j5k:c (2.93) BS07 CLA ? GO:0005737 ... A0A8F5GHI6 38071196
    790268 8j5k:c (2.93) BS08 CLA ? GO:0005737 ... A0A8F5GHI6 38071196
    790269 8j5k:c (2.93) BS09 CLA ? GO:0005737 ... A0A8F5GHI6 38071196
    790270 8j5k:c (2.93) BS10 CLA ? GO:0005737 ... A0A8F5GHI6 38071196
    790271 8j5k:c (2.93) BS11 CLA ? GO:0005737 ... A0A8F5GHI6 38071196
    790272 8j5k:c (2.93) BS12 CLA ? GO:0005737 ... A0A8F5GHI6 38071196
    790273 8j5k:c (2.93) BS13 CLA ? GO:0005737 ... A0A8F5GHI6 38071196
    790274 8j5k:c (2.93) BS14 CLA ? GO:0005737 ... A0A8F5GHI6 38071196
    790275 8j5k:d (2.93) BS01 FE2 1.10.3.9 GO:0005506 ... A0A679C012 38071196
    790276 8j5k:d (2.93) BS02 CLA 1.10.3.9 GO:0005506 ... A0A679C012 38071196
    790277 8j5k:d (2.93) BS03 PHO 1.10.3.9 GO:0005506 ... A0A679C012 38071196
    790278 8j5k:d (2.93) BS04 PHO 1.10.3.9 GO:0005506 ... A0A679C012 38071196
    790279 8j5k:d (2.93) BS05 CLA 1.10.3.9 GO:0005506 ... A0A679C012 38071196
    790280 8j5k:d (2.93) BS06 CLA 1.10.3.9 GO:0005506 ... A0A679C012 38071196
    790281 8j5k:d (2.93) BS07 BCT 1.10.3.9 GO:0005506 ... A0A679C012 38071196
    790282 8j5k:d (2.93) BS08 CLA 1.10.3.9 GO:0005506 ... A0A679C012 38071196
    790283 8j5k:d (2.93) BS09 CLA 1.10.3.9 GO:0005506 ... A0A679C012 38071196
    790284 8j5k:e (2.93) BS01 HEM ? GO:0009523 ... A0A679C209 38071196
    790285 8j5k:f (2.93) BS01 HEM ? GO:0009523 ... A0T0U1 38071196
    790286 8j5k:h (2.93) BS01 CLA ? GO:0009507 ... B7XBY7 38071196
    790287 8j5k:h (2.93) BS02 CLA ? GO:0009507 ... B7XBY7 38071196
    790288 8j5k:h (2.93) BS03 CLA ? GO:0009507 ... B7XBY7 38071196
    790289 8j5k:h (2.93) BS04 CLA ? GO:0009507 ... B7XBY7 38071196
    790290 8j5k:i (2.93) BS01 CLA ? GO:0009523 ... A0A679BVT8 38071196
    790291 8j5k:k (2.93) BS01 CLA ? GO:0009523 ... A0A2H5N031 38071196
    790292 8j5k:l (2.93) BS01 peptide ? GO:0005737 ... A0A151DYG7 38071196
    790293 8j5k:m (2.93) BS01 peptide ? GO:0009523 ... A0A679C2A0 38071196
    790294 8j5k:p (2.93) BS01 CLA ? GO:0009416 ... B8BUU4 38071196
    790295 8j5k:p (2.93) BS02 CLA ? GO:0009416 ... B8BUU4 38071196
    790296 8j5k:p (2.93) BS03 CLA ? GO:0009416 ... B8BUU4 38071196
    790297 8j5k:p (2.93) BS04 CLA ? GO:0009416 ... B8BUU4 38071196
    790298 8j5k:p (2.93) BS05 CLA ? GO:0009416 ... B8BUU4 38071196
    790299 8j5k:p (2.93) BS06 CLA ? GO:0009416 ... B8BUU4 38071196
    790300 8j5k:p (2.93) BS07 CLA ? GO:0009416 ... B8BUU4 38071196
    790301 8j5k:p (2.93) BS08 CLA ? GO:0009416 ... B8BUU4 38071196
    790302 8j5k:p (2.93) BS09 A86 ? GO:0009416 ... B8BUU4 38071196
    790303 8j5k:p (2.93) BS10 DD6 ? GO:0009416 ... B8BUU4 38071196
    790304 8j5k:v (2.93) BS01 HEM ? GO:0005506 ... A0A8F5GGT9 38071196
    790305 8j5k:z (2.93) BS01 CLA ? GO:0009523 ... A0T0T3 38071196
    790306 8j5o:0 (2.9) BS01 BCL ? GO:0005886 ... A7NQE9 37737710
    790307 8j5o:0 (2.9) BS02 BCL ? GO:0005886 ... A7NQE9 37737710
    790308 8j5o:0 (2.9) BS03 BCL ? GO:0005886 ... A7NQE9 37737710
    790309 8j5o:1 (2.9) BS01 BCL ? GO:0005886 ... Q83XD1 37737710
    790310 8j5o:1 (2.9) BS02 KGD ? GO:0005886 ... Q83XD1 37737710
    790311 8j5o:1 (2.9) BS03 BCL ? GO:0005886 ... Q83XD1 37737710
    790312 8j5o:2 (2.9) BS01 BCL ? GO:0005886 ... A7NQE9 37737710
    790313 8j5o:2 (2.9) BS02 BCL ? GO:0005886 ... A7NQE9 37737710
    790314 8j5o:2 (2.9) BS03 BCL ? GO:0005886 ... A7NQE9 37737710
    790315 8j5o:3 (2.9) BS01 KGD ? GO:0005886 ... Q83XD1 37737710
    790316 8j5o:3 (2.9) BS02 BCL ? GO:0005886 ... Q83XD1 37737710
    790317 8j5o:3 (2.9) BS03 BCL ? GO:0005886 ... Q83XD1 37737710
    790318 8j5o:3 (2.9) BS04 BCL ? GO:0005886 ... Q83XD1 37737710
    790319 8j5o:4 (2.9) BS01 BCL ? GO:0005886 ... A7NQE9 37737710
    790320 8j5o:4 (2.9) BS02 BCL ? GO:0005886 ... A7NQE9 37737710
    790321 8j5o:4 (2.9) BS03 BCL ? GO:0005886 ... A7NQE9 37737710
    790322 8j5o:4 (2.9) BS04 BCL ? GO:0005886 ... A7NQE9 37737710
    790323 8j5o:5 (2.9) BS01 BCL ? GO:0005886 ... Q83XD1 37737710
    790324 8j5o:5 (2.9) BS02 BCL ? GO:0005886 ... Q83XD1 37737710
    790325 8j5o:5 (2.9) BS03 BCL ? GO:0005886 ... Q83XD1 37737710
    790326 8j5o:5 (2.9) BS04 BCL ? GO:0005886 ... Q83XD1 37737710
    790327 8j5o:6 (2.9) BS01 BCL ? GO:0005886 ... A7NQE9 37737710
    790328 8j5o:6 (2.9) BS02 BCL ? GO:0005886 ... A7NQE9 37737710
    790329 8j5o:6 (2.9) BS03 BCL ? GO:0005886 ... A7NQE9 37737710
    790330 8j5o:6 (2.9) BS04 BCL ? GO:0005886 ... A7NQE9 37737710
    790331 8j5o:7 (2.9) BS01 BCL ? GO:0005886 ... Q83XD1 37737710
    790332 8j5o:7 (2.9) BS02 BCL ? GO:0005886 ... Q83XD1 37737710
    790333 8j5o:8 (2.9) BS01 BCL ? GO:0005886 ... A7NQE9 37737710
    790334 8j5o:8 (2.9) BS02 BCL ? GO:0005886 ... A7NQE9 37737710
    790335 8j5o:8 (2.9) BS03 BCL ? GO:0005886 ... A7NQE9 37737710
    790336 8j5o:9 (2.9) BS01 BCL ? GO:0005886 ... Q83XD1 37737710
    790337 8j5o:9 (2.9) BS02 BCL ? GO:0005886 ... Q83XD1 37737710
    790338 8j5o:9 (2.9) BS03 KGD ? GO:0005886 ... Q83XD1 37737710
    790339 8j5o:9 (2.9) BS04 BCL ? GO:0005886 ... Q83XD1 37737710
    790340 8j5o:A (2.9) BS01 BCL ? GO:0005886 ... Q83XD1 37737710
    790341 8j5o:A (2.9) BS02 KGD ? GO:0005886 ... Q83XD1 37737710
    790342 8j5o:A (2.9) BS03 BCL ? GO:0005886 ... Q83XD1 37737710
    790343 8j5o:A (2.9) BS04 BCL ? GO:0005886 ... Q83XD1 37737710
    790344 8j5o:B (2.9) BS01 BCL ? GO:0005886 ... A7NQE9 37737710
    790345 8j5o:B (2.9) BS02 BCL ? GO:0005886 ... A7NQE9 37737710
    790346 8j5o:B (2.9) BS03 BCL ? GO:0005886 ... A7NQE9 37737710
    790347 8j5o:C (2.9) BS01 KGD ? GO:0005506 ... A7NQE7 37737710
    790348 8j5o:C (2.9) BS02 BCL ? GO:0005506 ... A7NQE7 37737710
    790349 8j5o:C (2.9) BS03 HEM ? GO:0005506 ... A7NQE7 37737710
    790350 8j5o:C (2.9) BS04 HEM ? GO:0005506 ... A7NQE7 37737710
    790351 8j5o:C (2.9) BS05 HEM ? GO:0005506 ... A7NQE7 37737710
    790352 8j5o:C (2.9) BS06 HEM ? GO:0005506 ... A7NQE7 37737710
    790353 8j5o:C (2.9) BS07 KGD ? GO:0005506 ... A7NQE7 37737710
    790354 8j5o:D (2.9) BS01 BCL ? GO:0005886 ... Q83XD1 37737710
    790355 8j5o:D (2.9) BS02 KGD ? GO:0005886 ... Q83XD1 37737710
    790356 8j5o:D (2.9) BS03 BCL ? GO:0005886 ... Q83XD1 37737710
    790357 8j5o:E (2.9) BS01 KGD ? GO:0005886 ... A7NQE9 37737710
    790358 8j5o:E (2.9) BS02 BCL ? GO:0005886 ... A7NQE9 37737710
    790359 8j5o:E (2.9) BS03 BCL ? GO:0005886 ... A7NQE9 37737710
    790360 8j5o:F (2.9) BS01 BCL ? GO:0005886 ... Q83XD1 37737710
    790361 8j5o:F (2.9) BS02 BCL ? GO:0005886 ... Q83XD1 37737710
    790362 8j5o:F (2.9) BS03 BCL ? GO:0005886 ... Q83XD1 37737710
    790363 8j5o:G (2.9) BS01 BCL ? GO:0005886 ... A7NQE9 37737710
    790364 8j5o:G (2.9) BS02 BCL ? GO:0005886 ... A7NQE9 37737710
    790365 8j5o:G (2.9) BS03 BCL ? GO:0005886 ... A7NQE9 37737710
    790366 8j5o:H (2.9) BS01 BCL ? GO:0005886 ... Q83XD1 37737710
    790367 8j5o:H (2.9) BS02 BCL ? GO:0005886 ... Q83XD1 37737710
    790368 8j5o:H (2.9) BS03 BCL ? GO:0005886 ... Q83XD1 37737710
    790369 8j5o:I (2.9) BS01 BCL ? GO:0005886 ... A7NQE9 37737710
    790370 8j5o:I (2.9) BS02 BCL ? GO:0005886 ... A7NQE9 37737710
    790371 8j5o:I (2.9) BS03 BCL ? GO:0005886 ... A7NQE9 37737710
    790372 8j5o:J (2.9) BS01 BCL ? GO:0005886 ... Q83XD1 37737710
    790373 8j5o:J (2.9) BS02 KGD ? GO:0005886 ... Q83XD1 37737710
    790374 8j5o:J (2.9) BS03 BCL ? GO:0005886 ... Q83XD1 37737710
    790375 8j5o:K (2.9) BS01 BCL ? GO:0005886 ... A7NQE9 37737710
    790376 8j5o:K (2.9) BS02 BCL ? GO:0005886 ... A7NQE9 37737710
    790377 8j5o:L (2.9) BS01 BCL ? GO:0009772 ... A7NQE8 37737710
    790378 8j5o:L (2.9) BS02 BCL ? GO:0009772 ... A7NQE8 37737710
    790379 8j5o:L (2.9) BS03 BPH ? GO:0009772 ... A7NQE8 37737710
    790380 8j5o:L (2.9) BS04 FE ? GO:0009772 ... A7NQE8 37737710
    790381 8j5o:L (2.9) BS05 MQE ? GO:0009772 ... A7NQE8 37737710
    790382 8j5o:L (2.9) BS06 BPH ? GO:0009772 ... A7NQE8 37737710
    790383 8j5o:L (2.9) BS07 MQE ? GO:0009772 ... A7NQE8 37737710
    790384 8j5o:M (2.9) BS01 BCL ? GO:0009772 ... A7NQE8 37737710
    790385 8j5o:M (2.9) BS02 BPH ? GO:0009772 ... A7NQE8 37737710
    790386 8j5o:M (2.9) BS03 FE ? GO:0009772 ... A7NQE8 37737710
    790387 8j5o:M (2.9) BS04 BPH ? GO:0009772 ... A7NQE8 37737710
    790388 8j5o:M (2.9) BS05 MQE ? GO:0009772 ... A7NQE8 37737710
    790389 8j5o:M (2.9) BS06 BCL ? GO:0009772 ... A7NQE8 37737710
    790390 8j5o:M (2.9) BS07 BPH ? GO:0009772 ... A7NQE8 37737710
    790391 8j5o:M (2.9) BS08 MQE ? GO:0009772 ... A7NQE8 37737710
    790392 8j5o:N (2.9) BS01 BCL ? GO:0005886 ... Q83XD1 37737710
    790393 8j5o:N (2.9) BS02 BCL ? GO:0005886 ... Q83XD1 37737710
    790394 8j5o:O (2.9) BS01 BCL ? GO:0005886 ... A7NQE9 37737710
    790395 8j5o:O (2.9) BS02 BCL ? GO:0005886 ... A7NQE9 37737710
    790396 8j5o:P (2.9) BS01 BCL ? GO:0005886 ... Q83XD1 37737710
    790397 8j5o:P (2.9) BS02 BCL ? GO:0005886 ... Q83XD1 37737710
    790398 8j5o:P (2.9) BS03 BCL ? GO:0005886 ... Q83XD1 37737710
    790399 8j5o:Q (2.9) BS01 BCL ? GO:0005886 ... A7NQE9 37737710
    790400 8j5o:Q (2.9) BS02 BCL ? GO:0005886 ... A7NQE9 37737710
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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