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BioLiP
Download all results in tab-seperated text for 832530 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    786001 8ir9:D (2.2) BS07 CLA 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786002 8ir9:D (2.2) BS08 CLA 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786003 8ir9:D (2.2) BS09 CLA 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786004 8ir9:E (2.2) BS01 HEM ? GO:0005506 ... P12238 38297122
    786005 8ir9:F (2.2) BS01 HEM ? GO:0005506 ... P12239 38297122
    786006 8ir9:H (2.2) BS01 CLA ? GO:0009523 ... P19052 38297122
    786007 8ir9:H (2.2) BS02 CLA ? GO:0009523 ... P19052 38297122
    786008 8ir9:H (2.2) BS03 CLA ? GO:0009523 ... P19052 38297122
    786009 8ir9:I (2.2) BS01 CLA ? GO:0005737 ... P12240 38297122
    786010 8ir9:J (2.2) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    786011 8ir9:K (2.2) BS01 peptide ? GO:0005737 ... P19054 38297122
    786012 8ir9:K (2.2) BS02 CLA ? GO:0005737 ... P19054 38297122
    786013 8ir9:K (2.2) BS03 CLA ? GO:0005737 ... P19054 38297122
    786014 8ir9:O (2.2) BS01 CA ? GO:0009523 ... D0VWR2 38297122
    786015 8ir9:V (2.2) BS01 HEC ? GO:0005506 ... P0A387 38297122
    786016 8ir9:Z (2.2) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    786017 8ir9:a (2.2) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    786018 8ir9:a (2.2) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    786019 8ir9:a (2.2) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    786020 8ir9:a (2.2) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    786021 8ir9:a (2.2) BS05 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    786022 8ir9:a (2.2) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    786023 8ir9:a (2.2) BS07 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    786024 8ir9:a (2.2) BS08 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    786025 8ir9:a (2.2) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    786026 8ir9:b (2.2) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    786027 8ir9:b (2.2) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    786028 8ir9:b (2.2) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    786029 8ir9:b (2.2) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    786030 8ir9:b (2.2) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    786031 8ir9:b (2.2) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    786032 8ir9:b (2.2) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    786033 8ir9:b (2.2) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    786034 8ir9:b (2.2) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    786035 8ir9:b (2.2) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    786036 8ir9:b (2.2) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    786037 8ir9:b (2.2) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    786038 8ir9:b (2.2) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    786039 8ir9:b (2.2) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    786040 8ir9:b (2.2) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    786041 8ir9:c (2.2) BS01 OEX ? GO:0005737 ... D0VWR7 38297122
    786042 8ir9:c (2.2) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    786043 8ir9:c (2.2) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    786044 8ir9:c (2.2) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    786045 8ir9:c (2.2) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    786046 8ir9:c (2.2) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    786047 8ir9:c (2.2) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    786048 8ir9:c (2.2) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    786049 8ir9:c (2.2) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    786050 8ir9:c (2.2) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    786051 8ir9:c (2.2) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    786052 8ir9:c (2.2) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    786053 8ir9:c (2.2) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    786054 8ir9:c (2.2) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    786055 8ir9:c (2.2) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    786056 8ir9:c (2.2) BS16 CA ? GO:0005737 ... D0VWR7 38297122
    786057 8ir9:d (2.2) BS01 FE2 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786058 8ir9:d (2.2) BS02 CLA 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786059 8ir9:d (2.2) BS03 CLA 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786060 8ir9:d (2.2) BS04 PHO 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786061 8ir9:d (2.2) BS05 PHO 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786062 8ir9:d (2.2) BS06 CLA 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786063 8ir9:d (2.2) BS07 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786064 8ir9:d (2.2) BS08 CLA 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786065 8ir9:d (2.2) BS09 CLA 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786066 8ir9:e (2.2) BS01 HEM ? GO:0005506 ... P12238 38297122
    786067 8ir9:f (2.2) BS01 HEM ? GO:0005506 ... P12239 38297122
    786068 8ir9:h (2.2) BS01 CLA ? GO:0009523 ... P19052 38297122
    786069 8ir9:h (2.2) BS02 CLA ? GO:0009523 ... P19052 38297122
    786070 8ir9:h (2.2) BS03 CLA ? GO:0009523 ... P19052 38297122
    786071 8ir9:h (2.2) BS04 CLA ? GO:0009523 ... P19052 38297122
    786072 8ir9:i (2.2) BS01 CLA ? GO:0005737 ... P12240 38297122
    786073 8ir9:j (2.2) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    786074 8ir9:k (2.2) BS01 peptide ? GO:0005737 ... P19054 38297122
    786075 8ir9:k (2.2) BS02 CLA ? GO:0005737 ... P19054 38297122
    786076 8ir9:k (2.2) BS03 CLA ? GO:0005737 ... P19054 38297122
    786077 8ir9:o (2.2) BS01 CA ? GO:0009523 ... D0VWR2 38297122
    786078 8ir9:v (2.2) BS01 HEC ? GO:0005506 ... P0A387 38297122
    786079 8ir9:z (2.2) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    786080 8ira:A (2.2) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    786081 8ira:A (2.2) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    786082 8ira:A (2.2) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    786083 8ira:A (2.2) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    786084 8ira:A (2.2) BS05 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    786085 8ira:A (2.2) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    786086 8ira:A (2.2) BS07 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    786087 8ira:A (2.2) BS08 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    786088 8ira:A (2.2) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    786089 8ira:B (2.2) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    786090 8ira:B (2.2) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    786091 8ira:B (2.2) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    786092 8ira:B (2.2) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    786093 8ira:B (2.2) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    786094 8ira:B (2.2) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    786095 8ira:B (2.2) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    786096 8ira:B (2.2) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    786097 8ira:B (2.2) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    786098 8ira:B (2.2) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    786099 8ira:B (2.2) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    786100 8ira:B (2.2) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    786101 8ira:B (2.2) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    786102 8ira:B (2.2) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    786103 8ira:B (2.2) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    786104 8ira:B (2.2) BS16 CLA ? GO:0009521 ... D0VWR1 38297122
    786105 8ira:C (2.2) BS01 OEX ? GO:0005737 ... D0VWR7 38297122
    786106 8ira:C (2.2) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    786107 8ira:C (2.2) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    786108 8ira:C (2.2) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    786109 8ira:C (2.2) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    786110 8ira:C (2.2) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    786111 8ira:C (2.2) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    786112 8ira:C (2.2) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    786113 8ira:C (2.2) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    786114 8ira:C (2.2) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    786115 8ira:C (2.2) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    786116 8ira:C (2.2) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    786117 8ira:C (2.2) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    786118 8ira:C (2.2) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    786119 8ira:C (2.2) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    786120 8ira:D (2.2) BS01 FE2 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786121 8ira:D (2.2) BS02 CLA 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786122 8ira:D (2.2) BS03 CLA 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786123 8ira:D (2.2) BS04 PHO 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786124 8ira:D (2.2) BS05 PHO 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786125 8ira:D (2.2) BS06 CLA 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786126 8ira:D (2.2) BS07 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786127 8ira:D (2.2) BS08 CLA 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786128 8ira:D (2.2) BS09 CLA 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786129 8ira:E (2.2) BS01 HEM ? GO:0005506 ... P12238 38297122
    786130 8ira:F (2.2) BS01 HEM ? GO:0005506 ... P12239 38297122
    786131 8ira:H (2.2) BS01 CLA ? GO:0009523 ... P19052 38297122
    786132 8ira:H (2.2) BS02 CLA ? GO:0009523 ... P19052 38297122
    786133 8ira:H (2.2) BS03 CLA ? GO:0009523 ... P19052 38297122
    786134 8ira:H (2.2) BS04 CLA ? GO:0009523 ... P19052 38297122
    786135 8ira:I (2.2) BS01 CLA ? GO:0005737 ... P12240 38297122
    786136 8ira:J (2.2) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    786137 8ira:K (2.2) BS01 peptide ? GO:0005737 ... P19054 38297122
    786138 8ira:K (2.2) BS02 CLA ? GO:0005737 ... P19054 38297122
    786139 8ira:K (2.2) BS03 CLA ? GO:0005737 ... P19054 38297122
    786140 8ira:O (2.2) BS01 CA ? GO:0009523 ... D0VWR2 38297122
    786141 8ira:V (2.2) BS01 HEC ? GO:0005506 ... P0A387 38297122
    786142 8ira:X (2.2) BS01 CLA ? GO:0009523 ... D0VWR4 38297122
    786143 8ira:Z (2.2) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    786144 8ira:a (2.2) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    786145 8ira:a (2.2) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    786146 8ira:a (2.2) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    786147 8ira:a (2.2) BS04 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    786148 8ira:a (2.2) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    786149 8ira:a (2.2) BS06 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    786150 8ira:a (2.2) BS07 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    786151 8ira:a (2.2) BS08 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    786152 8ira:a (2.2) BS09 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    786153 8ira:b (2.2) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    786154 8ira:b (2.2) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    786155 8ira:b (2.2) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    786156 8ira:b (2.2) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    786157 8ira:b (2.2) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    786158 8ira:b (2.2) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    786159 8ira:b (2.2) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    786160 8ira:b (2.2) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    786161 8ira:b (2.2) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    786162 8ira:b (2.2) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    786163 8ira:b (2.2) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    786164 8ira:b (2.2) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    786165 8ira:b (2.2) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    786166 8ira:b (2.2) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    786167 8ira:b (2.2) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    786168 8ira:c (2.2) BS01 OEX ? GO:0005737 ... D0VWR7 38297122
    786169 8ira:c (2.2) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    786170 8ira:c (2.2) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    786171 8ira:c (2.2) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    786172 8ira:c (2.2) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    786173 8ira:c (2.2) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    786174 8ira:c (2.2) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    786175 8ira:c (2.2) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    786176 8ira:c (2.2) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    786177 8ira:c (2.2) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    786178 8ira:c (2.2) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    786179 8ira:c (2.2) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    786180 8ira:c (2.2) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    786181 8ira:c (2.2) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    786182 8ira:c (2.2) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    786183 8ira:c (2.2) BS16 CA ? GO:0005737 ... D0VWR7 38297122
    786184 8ira:d (2.2) BS01 FE2 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786185 8ira:d (2.2) BS02 CLA 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786186 8ira:d (2.2) BS03 PHO 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786187 8ira:d (2.2) BS04 PHO 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786188 8ira:d (2.2) BS05 CLA 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786189 8ira:d (2.2) BS06 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786190 8ira:d (2.2) BS07 CLA 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786191 8ira:d (2.2) BS08 CLA 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786192 8ira:d (2.2) BS09 CLA 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    786193 8ira:e (2.2) BS01 HEM ? GO:0005506 ... P12238 38297122
    786194 8ira:f (2.2) BS01 HEM ? GO:0005506 ... P12239 38297122
    786195 8ira:h (2.2) BS01 CLA ? GO:0009523 ... P19052 38297122
    786196 8ira:h (2.2) BS02 CLA ? GO:0009523 ... P19052 38297122
    786197 8ira:h (2.2) BS03 CLA ? GO:0009523 ... P19052 38297122
    786198 8ira:h (2.2) BS04 CLA ? GO:0009523 ... P19052 38297122
    786199 8ira:i (2.2) BS01 CLA ? GO:0005737 ... P12240 38297122
    786200 8ira:j (2.2) BS01 MG ? GO:0009523 ... Q7DGD4 38297122

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218