BioLiP

Download all results in tab-seperated text for 6 receptor-ligand interactions, whose format is explained at readme.txt.

Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.

Click Site # to view the binding site structure. Hover over Site # to view the binding residues.

The sequence is converted from residues with experimentally determined coordinates in the structure; residues not observed in the 3D structure are excluded.

Hover over EC number to view the full name of enzymatic activity.

Hover over GO terms to view all GO terms.

Hover over UniProt to view the protein name.

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#	PDB (resolution)	Site #	DNA sequence	EC number	GO terms	UniProt	PubMed
1	8g6s:A (3.47)	BS01	>8g6s:I (identical to 7c0m:I, 7c0m:i, 7d1z:I, 8g6q:I, 8jlb:I, 8jld:I, 5kgf:I, 3lz0:I, 3lz1:J, 5mlu:J, 6nn6:I, 8of4:I, 7oh9:I, 7ohb:I, 7ohc:I, 6se0:I, 6se6:I, 6see:I, 6sef:I, 6seg:I, 6t9l:I, 7w9v:I, 7wlr:I, 8ybj:I, 7yqk:I, 6z6p:I, 6zhx:I, 4zux:I, 4zux:S) atcagaatcccggtgccgaggccgctcaattggtcgtagacagctctagc accgcttaaacgcacgtacgcgctgtcccccgcgttttaaccgccaaggg gattactccctagtctccaggcacgtgtcagatatatacatcgat	?	GO:0000786 ...	P84233	39149911
2	8g6s:C (3.47)	BS01	>8g6s:I (identical to 7c0m:I, 7c0m:i, 7d1z:I, 8g6q:I, 8jlb:I, 8jld:I, 5kgf:I, 3lz0:I, 3lz1:J, 5mlu:J, 6nn6:I, 8of4:I, 7oh9:I, 7ohb:I, 7ohc:I, 6se0:I, 6se6:I, 6see:I, 6sef:I, 6seg:I, 6t9l:I, 7w9v:I, 7wlr:I, 8ybj:I, 7yqk:I, 6z6p:I, 6zhx:I, 4zux:I, 4zux:S) atcagaatcccggtgccgaggccgctcaattggtcgtagacagctctagc accgcttaaacgcacgtacgcgctgtcccccgcgttttaaccgccaaggg gattactccctagtctccaggcacgtgtcagatatatacatcgat	?	GO:0000786 ...	P06897	39149911
3	8g6s:D (3.47)	BS01	>8g6s:I (identical to 7c0m:I, 7c0m:i, 7d1z:I, 8g6q:I, 8jlb:I, 8jld:I, 5kgf:I, 3lz0:I, 3lz1:J, 5mlu:J, 6nn6:I, 8of4:I, 7oh9:I, 7ohb:I, 7ohc:I, 6se0:I, 6se6:I, 6see:I, 6sef:I, 6seg:I, 6t9l:I, 7w9v:I, 7wlr:I, 8ybj:I, 7yqk:I, 6z6p:I, 6zhx:I, 4zux:I, 4zux:S) atcagaatcccggtgccgaggccgctcaattggtcgtagacagctctagc accgcttaaacgcacgtacgcgctgtcccccgcgttttaaccgccaaggg gattactccctagtctccaggcacgtgtcagatatatacatcgat	?	GO:0000786 ...	P02281	39149911
4	8g6s:F (3.47)	BS01	>8g6s:I (identical to 7c0m:I, 7c0m:i, 7d1z:I, 8g6q:I, 8jlb:I, 8jld:I, 5kgf:I, 3lz0:I, 3lz1:J, 5mlu:J, 6nn6:I, 8of4:I, 7oh9:I, 7ohb:I, 7ohc:I, 6se0:I, 6se6:I, 6see:I, 6sef:I, 6seg:I, 6t9l:I, 7w9v:I, 7wlr:I, 8ybj:I, 7yqk:I, 6z6p:I, 6zhx:I, 4zux:I, 4zux:S) atcagaatcccggtgccgaggccgctcaattggtcgtagacagctctagc accgcttaaacgcacgtacgcgctgtcccccgcgttttaaccgccaaggg gattactccctagtctccaggcacgtgtcagatatatacatcgat	?	GO:0000786 ...	P62799	39149911
5	8g6s:G (3.47)	BS01	>8g6s:I (identical to 7c0m:I, 7c0m:i, 7d1z:I, 8g6q:I, 8jlb:I, 8jld:I, 5kgf:I, 3lz0:I, 3lz1:J, 5mlu:J, 6nn6:I, 8of4:I, 7oh9:I, 7ohb:I, 7ohc:I, 6se0:I, 6se6:I, 6see:I, 6sef:I, 6seg:I, 6t9l:I, 7w9v:I, 7wlr:I, 8ybj:I, 7yqk:I, 6z6p:I, 6zhx:I, 4zux:I, 4zux:S) atcagaatcccggtgccgaggccgctcaattggtcgtagacagctctagc accgcttaaacgcacgtacgcgctgtcccccgcgttttaaccgccaaggg gattactccctagtctccaggcacgtgtcagatatatacatcgat	?	GO:0000786 ...	P06897	39149911
6	8g6s:K (3.47)	BS01	>8g6s:I (identical to 7c0m:I, 7c0m:i, 7d1z:I, 8g6q:I, 8jlb:I, 8jld:I, 5kgf:I, 3lz0:I, 3lz1:J, 5mlu:J, 6nn6:I, 8of4:I, 7oh9:I, 7ohb:I, 7ohc:I, 6se0:I, 6se6:I, 6see:I, 6sef:I, 6seg:I, 6t9l:I, 7w9v:I, 7wlr:I, 8ybj:I, 7yqk:I, 6z6p:I, 6zhx:I, 4zux:I, 4zux:S) atcagaatcccggtgccgaggccgctcaattggtcgtagacagctctagc accgcttaaacgcacgtacgcgctgtcccccgcgttttaaccgccaaggg gattactccctagtctccaggcacgtgtcagatatatacatcgat	?	N/A	P0CG47	39149911