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BioLiP
Download all results in tab-seperated text for 22 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8wb4:A (2.47) BS13 CLA 1.10.3.9 GO:0005506 ... A0A222AI41 38806516
    2 8wb4:C (2.47) BS01 OEX ? GO:0005737 ... A0A222AI36 38806516
    3 8wb4:C (2.47) BS02 8CT ? GO:0005737 ... A0A222AI36 38806516
    4 8wb4:C (2.47) BS03 8CT ? GO:0005737 ... A0A222AI36 38806516
    5 8wb4:C (2.47) BS04 CLA ? GO:0005737 ... A0A222AI36 38806516
    6 8wb4:C (2.47) BS05 CLA ? GO:0005737 ... A0A222AI36 38806516
    7 8wb4:C (2.47) BS06 CLA ? GO:0005737 ... A0A222AI36 38806516
    8 8wb4:C (2.47) BS07 CLA ? GO:0005737 ... A0A222AI36 38806516
    9 8wb4:C (2.47) BS08 CLA ? GO:0005737 ... A0A222AI36 38806516
    10 8wb4:C (2.47) BS09 CLA ? GO:0005737 ... A0A222AI36 38806516
    11 8wb4:C (2.47) BS10 CLA ? GO:0005737 ... A0A222AI36 38806516
    12 8wb4:C (2.47) BS11 CLA ? GO:0005737 ... A0A222AI36 38806516
    13 8wb4:C (2.47) BS12 CLA ? GO:0005737 ... A0A222AI36 38806516
    14 8wb4:C (2.47) BS13 CLA ? GO:0005737 ... A0A222AI36 38806516
    15 8wb4:C (2.47) BS14 CLA ? GO:0005737 ... A0A222AI36 38806516
    16 8wb4:C (2.47) BS15 CLA ? GO:0005737 ... A0A222AI36 38806516
    17 8wb4:C (2.47) BS16 CLA ? GO:0005737 ... A0A222AI36 38806516
    18 8wb4:C (2.47) BS17 8CT ? GO:0005737 ... A0A222AI36 38806516
    19 8wb4:I (2.47) BS02 CLA ? GO:0005737 ... A0A222AI80 38806516
    20 8wb4:I (2.47) BS03 8CT ? GO:0005737 ... A0A222AI80 38806516
    21 8wb4:K (2.47) BS03 CLA ? GO:0005737 ... A0A222AIA0 38806516
    22 8wb4:K (2.47) BS04 CLA ? GO:0005737 ... A0A222AIA0 38806516
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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