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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    13801 4j51:A (2.3) BS01 N75 3.1.3.48 GO:0004725 ... Q9Y2R2 23713581 MOAD: ic50=0.259uM
    PDBbind: -logKd/Ki=6.59, IC50=0.259uM
    BindingDB: IC50=259nM, Ki=110nM
    13802 4j52:A (2.3) BS01 1J3 2.7.11.21 GO:0004672 ... P53350 23664874 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3.0nM
    13803 4j53:A (2.5) BS02 1J4 2.7.11.21 GO:0004672 ... P53350 23664874 MOAD: ic50=2nM
    PDBbind: -logKd/Ki=8.70, IC50=2nM
    BindingDB: IC50=2.0nM
    13804 4j58:A (1.28) BS01 53Z 5.2.1.8 GO:0000413 ... P30405 27652979 PDBbind: -logKd/Ki=3.30, IC50>500uM
    13805 4j59:A (1.92) BS01 671 5.2.1.8 GO:0000413 ... P30405 27652979 PDBbind: -logKd/Ki=5.85, IC50=1.4uM
    13806 4j5b:A (2.01) BS01 6B4 5.2.1.8 GO:0000413 ... P30405 27652979 PDBbind: -logKd/Ki=6.22, IC50=0.6uM
    13807 4j5c:X (1.03) BS01 7I6 5.2.1.8 GO:0000413 ... P30405 27652979 PDBbind: -logKd/Ki=5.52, IC50=3.0uM
    13808 4j5d:X (1.32) BS01 728 5.2.1.8 GO:0000413 ... P30405 27652979 PDBbind: -logKd/Ki=5.96, IC50=1.1uM
    13809 4j5e:X (0.99) BS01 7B7 5.2.1.8 GO:0000413 ... P30405 27652979 PDBbind: -logKd/Ki=4.94, IC50=11.4uM
    13810 4j5p:A (2.3) BS01 BR1 3.1.1.-
    3.5.1.99    		 GO:0000139 ... P97612 23581831 PDBbind: -logKd/Ki=7.92, Ki=12nM
    13811 4j6i:A (2.9) BS01 1JV 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 23540645 PDBbind: -logKd/Ki=8.85, IC50=1.4nM
    BindingDB: IC50=1.4nM
    13812 4j70:K (2.8) BS01 1KR 3.4.25.1 GO:0004298 ... P30656 23547757 PDBbind: -logKd/Ki=5.24, IC50=5.7uM
    13813 4j74:A (1.2) BS01 I18 2.3.2.27 GO:0005634 ... P56273 24900726 MOAD: Kd=26uM
    PDBbind: -logKd/Ki=4.59, Kd=26uM
    13814 4j74:A (1.2) BS02 I18 2.3.2.27 GO:0005634 ... P56273 24900726 MOAD: Kd=26uM
    PDBbind: -logKd/Ki=4.59, Kd=26uM
    13815 4j7d:A (1.25) BS01 I31 2.3.2.27 GO:0005634 ... P56273 24900726 MOAD: Kd=20uM
    PDBbind: -logKd/Ki=4.70, Kd=20uM
    13816 4j7e:A (1.63) BS01 I29 2.3.2.27 GO:0005634 ... P56273 24900726 MOAD: Kd=14uM
    PDBbind: -logKd/Ki=4.85, Kd=14uM
    13817 4j8m:A (1.853) BS01 CJ5 2.7.11.1 GO:0000212 ... O14965 25175806 MOAD: ic50=48nM
    PDBbind: -logKd/Ki=7.32, IC50=48nM
    13818 4j8t:A (2.05) BS01 DOG ? N/A Q9HYR3 24005320 MOAD: Kd=168nM
    PDBbind: -logKd/Ki=6.77, Kd=168nM
    BindingDB: Kd=474nM
    13819 4j93:A (1.74) BS02 1JR ? GO:0016032 ... Q79791 23817385 PDBbind: -logKd/Ki=4.70, Kd=20uM
    13820 4j9a:A (3.2) BS01 DOG ? N/A Q9HYR3 24005320 PDBbind: -logKd/Ki=8.22, Kd<6nM
    BindingDB: Kd=474nM
    13821 4jai:A (3.2) BS01 XU2 2.7.11.1 GO:0000212 ... O14965 23570792 PDBbind: -logKd/Ki=8.40, IC50=4nM
    BindingDB: IC50=4.0nM
    13822 4jaj:A (2.7) BS01 XU1 2.7.11.1 GO:0000212 ... O14965 23570792 PDBbind: -logKd/Ki=5.26, IC50=5.54uM
    BindingDB: IC50=5540nM
    13823 4jal:A (2.0) BS01 SAH 2.1.1.207 GO:0001510 ... P0AGJ7 23804755 PDBbind: -logKd/Ki=4.60, Kd=25uM
    13824 4jal:B (2.0) BS01 SAH 2.1.1.207 GO:0001510 ... P0AGJ7 23804755 PDBbind: -logKd/Ki=4.60, Kd=25uM
    13825 4jaz:A (2.85) BS01 STL ? GO:0003677 ... P37231 24796862 PDBbind: -logKd/Ki=5.04, Kd=9.17uM
    13826 4jbl:B (2.0) BS01 MET 2.5.1.47 GO:0004124 ... O15570 23747298 MOAD: Kd=0.54mM
    PDBbind: -logKd/Ki=3.27, Kd=0.54mM
    13827 4jbo:A (2.493) BS01 WPH 2.7.11.1 GO:0000212 ... O14965 23610398 MOAD: ic50=24nM
    PDBbind: -logKd/Ki=7.62, IC50=24nM
    BindingDB: IC50=24nM
    13828 4jbp:A (2.45) BS01 YPH 2.7.11.1 GO:0000212 ... O14965 23610398 MOAD: ic50=41nM
    PDBbind: -logKd/Ki=7.39, IC50=41nM
    BindingDB: IC50=41nM
    13829 4jbs:A (2.789) BS02 P52 3.4.11.- GO:0002250 ... Q6P179 24248368 PDBbind: -logKd/Ki=7.96, IC50=11nM
    BindingDB: IC50=11nM
    13830 4jda:A (2.65) BS01 A9S ? GO:0004864 ... Q9SSM7 23844015 PDBbind: -logKd/Ki=6.29, IC50=0.51uM
    13831 4jda:B (2.65) BS01 A9S ? GO:0004864 ... Q9SSM7 23844015 PDBbind: -logKd/Ki=6.29, IC50=0.51uM
    13832 4je7:A (2.1) BS01 BB2 3.5.1.88 GO:0042586 ... Q9FV53 24531459 MOAD: Kd=395nM
    PDBbind: -logKd/Ki=6.40, Kd=395nM
    BindingDB: IC50=27nM
    13833 4jfi:A (1.05) BS01 1KT 5.2.1.8 GO:0003755 ... Q13451 23647266 MOAD: Ki=18.1uM
    PDBbind: -logKd/Ki=4.74, Ki=18.1uM
    13834 4jfj:A (1.08) BS01 1KU 5.2.1.8 GO:0003755 ... Q13451 23647266 MOAD: Ki=2.1uM
    PDBbind: -logKd/Ki=5.68, Ki=2.1uM
    BindingDB: Ki=2100nM
    13835 4jfk:A (1.15) BS01 JFK 5.2.1.8 GO:0003755 ... Q13451 23647266 MOAD: Kd=0.36uM
    PDBbind: -logKd/Ki=6.44, Kd=0.36uM
    BindingDB: Ki=300nM, Kd=360nM
    13836 4jfl:A (1.2) BS01 1KY 5.2.1.8 GO:0003755 ... Q13451 23647266 MOAD: Kd=10.5uM
    PDBbind: -logKd/Ki=4.98, Kd=10.5uM
    BindingDB: Kd=10500nM, Ki=13900nM
    13837 4jfm:A (1.02) BS01 1KZ 5.2.1.8 GO:0003755 ... Q13451 23647266 MOAD: Kd=3.3uM
    PDBbind: -logKd/Ki=5.48, Kd=3.3uM
    BindingDB: Ki=7600nM, Kd=3300nM
    13838 4jfs:A (2.0) BS01 16Z ? GO:0004560 ... Q8A3I4 23740878 MOAD: Ki=5.4uM
    PDBbind: -logKd/Ki=5.27, Ki=5.4uM
    13839 4jft:A (2.1) BS01 1KN ? GO:0004560 ... Q8A3I4 23740878 MOAD: Ki=3.5uM
    PDBbind: -logKd/Ki=5.46, Ki=3.5uM
    13840 4jfv:A (1.88) BS01 H57 ? GO:0004560 ... Q8A3I4 23740878 MOAD: Ki=0.52uM
    PDBbind: -logKd/Ki=6.28, Ki=0.52uM
    13841 4jfw:A (2.1) BS01 H58 ? GO:0004560 ... Q8A3I4 23740878 MOAD: Ki=0.46uM
    PDBbind: -logKd/Ki=6.34, Ki=0.46uM
    13842 4jg6:A (2.6) BS01 1LB 2.7.11.1 GO:0004672 ... P51812 23540679 PDBbind: -logKd/Ki=6.44, IC50=0.36uM
    13843 4jg7:A (3.0002) BS01 1LC 2.7.11.1 GO:0004672 ... P51812 23540679 PDBbind: -logKd/Ki=6.92, IC50=0.12uM
    13844 4jg8:A (3.1002) BS01 1LE 2.7.11.1 GO:0004672 ... P51812 23540679 PDBbind: -logKd/Ki=8.60, IC50<2.5nM
    13845 4jgv:A (3.01) BS01 T94 ? GO:0003677 ... P22736 24316735 PDBbind: -logKd/Ki=6.57, Kd=0.27uM
    13846 4jh0:A (2.35) BS01 1MD 3.4.14.5 GO:0001618 ... P27487 23964740 MOAD: Ki=0.94nM
    PDBbind: -logKd/Ki=9.03, Ki=0.94nM
    13847 4jhq:A (1.99) BS01 B6F ? GO:0005576 ... P02701 N/A PDBbind: -logKd/Ki=7.74, IC50=18nM
    13848 4jht:A (1.18) BS01 8XQ 1.14.11.33 GO:0005515 ... P05050 26682036 PDBbind: -logKd/Ki=4.99, IC50=10.2uM
    13849 4jhz:A (2.831) BS01 1KV 3.2.1.31 GO:0004553 ... P05804 23690068 PDBbind: -logKd/Ki=6.02, Ki=957nM
    BindingDB: Ki=9.6e+2nM
    13850 4jia:A (1.85) BS01 1K3 2.7.10.2 GO:0004672 ... O60674 23870430 MOAD: Ki=0.0006uM
    PDBbind: -logKd/Ki=9.22, Ki=0.6nM
    BindingDB: Ki=0.600000nM, IC50=22nM
    13851 4jib:A (1.72) BS02 1L6 3.1.4.17 GO:0004114 ... O00408 23582272 MOAD: ic50=45nM
    PDBbind: -logKd/Ki=7.35, IC50=45nM
    BindingDB: IC50=45nM
    13852 4jik:A (1.9) BS01 1KO 2.7.11.1 GO:0000077 ... O14757 23587425 MOAD: ic50=0.018uM
    PDBbind: -logKd/Ki=7.74, IC50=0.018uM
    BindingDB: IC50=18nM
    13853 4jin:A (2.095) BS01 1L7 2.7.11.1 GO:0004672 ... O28471 23523885 PDBbind: -logKd/Ki=5.64, Kd=2.28uM
    13854 4jit:B (2.8) BS01 3ZF 2.4.2.-
    2.4.2.22    		 GO:0000287 ... P0A9M5 23927482 PDBbind: -logKd/Ki=6.64, Ki=0.23uM
    13855 4jit:C (2.8) BS01 3ZF 2.4.2.-
    2.4.2.22    		 GO:0000287 ... P0A9M5 23927482 PDBbind: -logKd/Ki=6.64, Ki=0.23uM
    13856 4jjf:A (2.2) BS01 FE9 1.12.98.2 GO:0006730 ... P32440 23873755 PDBbind: -logKd/Ki=8.00, Ki=10nM
    13857 4jjf:A (2.2) BS02 N2I 1.12.98.2 GO:0006730 ... P32440 23873755 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    13858 4jjf:B (2.2) BS01 FE9 1.12.98.2 GO:0006730 ... P32440 23873755 PDBbind: -logKd/Ki=8.00, Ki=10nM
    13859 4jjf:B (2.2) BS02 N2I 1.12.98.2 GO:0006730 ... P32440 23873755 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    13860 4jjg:A (2.5) BS01 FE9 1.12.98.2 GO:0006730 ... P32440 23873755 PDBbind: -logKd/Ki=8.70, Ki=2nM
    13861 4jjg:B (2.5) BS01 FE9 1.12.98.2 GO:0006730 ... P32440 23873755 PDBbind: -logKd/Ki=8.70, Ki=2nM
    13862 4jjg:B (2.5) BS02 IC9 1.12.98.2 GO:0006730 ... P32440 23873755 PDBbind: -logKd/Ki=8.70, Ki=2nM
    13863 4jjs:A (2.2) BS01 1M9 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 23768906 PDBbind: -logKd/Ki=6.70, IC50=0.2uM
    13864 4jju:A (1.91) BS01 1MB 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 23768906 PDBbind: -logKd/Ki=6.29, IC50=0.51uM
    13865 4jkt:A (2.77) BS01 04A 3.5.1.2 GO:0004359 ... D3Z7P3 23935106 PDBbind: -logKd/Ki=7.09, IC50=80.4nM
    13866 4jkt:B (2.77) BS01 04A 3.5.1.2 GO:0004359 ... D3Z7P3 23935106 PDBbind: -logKd/Ki=7.09, IC50=80.4nM
    13867 4jkt:C (2.77) BS01 04A 3.5.1.2 GO:0004359 ... D3Z7P3 23935106 PDBbind: -logKd/Ki=7.09, IC50=80.4nM
    13868 4jkt:D (2.77) BS01 04A 3.5.1.2 GO:0004359 ... D3Z7P3 23935106 PDBbind: -logKd/Ki=7.09, IC50=80.4nM
    13869 4jkw:A (2.01) BS01 IPE ? N/A O00481 23872678 MOAD: Kd=69.9uM
    PDBbind: -logKd/Ki=4.16, Kd=69.9uM
    BindingDB: EC50=71000nM, IC50=513000nM
    13870 4jlg:A (1.896) BS02 1L8 2.1.1.364 GO:0005694 ... Q8WTS6 25136132 PDBbind: -logKd/Ki=8.70, IC50=2.0nM
    BindingDB: IC50=2.0nM, Ki=0.330000nM
    13871 4jlh:A (2.09) BS01 0L9 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23615903 MOAD: ic50=15.6uM
    PDBbind: -logKd/Ki=5.40, IC50=4.0uM
    BindingDB: IC50=4e+2nM
    13872 4jlj:A (2.0) BS01 1NM 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 24419380 MOAD: Ki=726.4nM
    PDBbind: -logKd/Ki=6.13, IC50=745.7nM
    BindingDB: IC50=230nM
    13873 4jlj:A (2.0) BS02 1NM 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 24419380 MOAD: Ki=726.4nM
    PDBbind: -logKd/Ki=6.13, IC50=745.7nM
    BindingDB: IC50=230nM
    13874 4jlm:A (2.18) BS01 1NN 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 24419380 MOAD: Ki=6.1nM
    PDBbind: -logKd/Ki=7.64, IC50=22.7nM
    BindingDB: IC50=7.0nM
    13875 4jlm:A (2.18) BS02 1NN 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 24419380 MOAD: Ki=6.1nM
    PDBbind: -logKd/Ki=7.64, IC50=22.7nM
    BindingDB: IC50=7.0nM
    13876 4jln:A (2.15) BS01 18V 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 24419380 MOAD: Ki=1.5nM
    PDBbind: -logKd/Ki=7.78, IC50=16.7nM
    BindingDB: Ki=1.5nM, IC50=3.0nM
    13877 4jls:A (2.2) BS01 3ZE 2.4.2.-
    2.4.2.22    		 GO:0000287 ... P0A9M5 23927482 MOAD: Ki=2.2uM
    PDBbind: -logKd/Ki=5.66, Ki=2.2uM
    13878 4jmu:A (2.0) BS01 1ML 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0005198 ... P12497 24024973 MOAD: ic50=3.4uM
    PDBbind: -logKd/Ki=5.47, IC50=3.4uM
    13879 4jmx:A (2.55) BS01 IM2 2.3.2.- GO:0005576 ... O53638 23999293 PDBbind: -logKd/Ki=7.21, Kd=62.1nM
    13880 4jn2:A (1.71) BS01 4CC N/A N/A N/A 23476049 PDBbind: -logKd/Ki=11.68, Kd=2.1pM
    13881 4jn2:B (1.71) BS01 4CC N/A N/A N/A 23476049 PDBbind: -logKd/Ki=11.68, Kd=2.1pM
    13882 4jn4:A (2.3) BS01 ATP ? GO:0005515 ... P0A6Y8 23708608 PDBbind: -logKd/Ki=5.86, Kd=1.38uM
    13883 4jn4:B (2.3) BS01 ATP ? GO:0005515 ... P0A6Y8 23708608 PDBbind: -logKd/Ki=5.86, Kd=1.38uM
    13884 4jnc:A (1.96) BS01 1LF 3.1.3.76
    3.3.2.10    		 GO:0003824 ... P34913 23664879 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=100nM
    13885 4jne:A (1.96) BS01 ATP ? GO:0005515 ... P0A6Y8 23708608 PDBbind: -logKd/Ki=5.86, Kd=1.38uM
    13886 4jne:B (1.96) BS01 ATP ? GO:0005515 ... P0A6Y8 23708608 PDBbind: -logKd/Ki=5.86, Kd=1.38uM
    13887 4jnj:A (1.902) BS01 BTN N/A GO:0009374 ... N/A 23670729 PDBbind: -logKd/Ki=9.07, Kd=0.85nM
    13888 4jnm:A (2.2) BS01 1LJ 2.4.2.12 GO:0005125 ... P43490 23668988 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3.0nM
    13889 4jnm:B (2.2) BS01 1LJ 2.4.2.12 GO:0005125 ... P43490 23668988 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3.0nM
    13890 4joa:A (2.7) BS01 3DK 2.7.10.1 GO:0004672 ... Q9UM73 23880539 PDBbind: -logKd/Ki=7.54, IC50=29nM
    BindingDB: IC50=29nM
    13891 4joo:A (1.8) BS01 1M4 3.4.23.46 GO:0004190 ... P56817 23537249 MOAD: ic50=36830nM
    PDBbind: -logKd/Ki=4.43, IC50=36.83uM
    13892 4jp9:A (1.8) BS01 1M5 3.4.23.46 GO:0004190 ... P56817 23537249 MOAD: ic50=24nM
    PDBbind: -logKd/Ki=7.62, IC50=24nM
    13893 4jpa:A (2.0) BS05 AZ6 3.4.24.- GO:0004222 ... P45452 23810497 MOAD: ic50=3.3nM
    PDBbind: -logKd/Ki=8.48, IC50=3.3nM
    13894 4jpc:A (1.8) BS01 1M6 3.4.23.46 GO:0004190 ... P56817 23537249 MOAD: ic50=94nM
    PDBbind: -logKd/Ki=7.03, IC50=94nM
    13895 4jpe:A (1.8) BS01 1M7 3.4.23.46 GO:0004190 ... P56817 23537249 MOAD: ic50=48nM
    PDBbind: -logKd/Ki=7.32, IC50=48nM
    13896 4jps:A (2.2) BS01 1LT 2.7.11.1
    2.7.1.137
    2.7.1.153    		 GO:0001525 ... P42336 23726034 PDBbind: -logKd/Ki=8.30, IC50=0.005uM
    BindingDB: IC50=5.0nM
    13897 4jpx:A (1.55) BS01 PHE 1.14.16.1 GO:0004497 ... P30967 23860686 PDBbind: -logKd/Ki=5.15, Kd=7.0uM
    13898 4jpy:A (2.13) BS02 PHE 1.14.16.1 GO:0004497 ... P30967 23860686 PDBbind: -logKd/Ki=4.43, Kd=37uM
    13899 4jq7:A (2.73) BS01 KJQ 2.7.10.1 GO:0004672 ... P00533 23611691 PDBbind: -logKd/Ki=6.41, IC50=393nM
    BindingDB: IC50=223nM
    13900 4jq8:A (2.83) BS01 KJ8 2.7.10.1 GO:0004672 ... P00533 23611691 PDBbind: -logKd/Ki=8.10, IC50=8nM
    BindingDB: IC50=8.0nM
    13901 4jql:A (1.72) BS01 VJ6 3.6.4.10 GO:0005524 ... P07900 23554224 MOAD: ic50=1uM
    PDBbind: -logKd/Ki=6.00, IC50=1uM
    13902 4jr3:A (2.7) BS01 KJR 2.7.10.1 GO:0004672 ... P00533 23611691 PDBbind: -logKd/Ki=6.66, IC50=218nM
    BindingDB: IC50=218nM
    13903 4jr5:A (1.906) BS01 1LS 2.4.2.12 GO:0005125 ... P43490 23617784 MOAD: ic50=0.007uM
    PDBbind: -logKd/Ki=8.15, IC50=0.007uM
    BindingDB: IC50=9.9nM
    13904 4jr5:B (1.906) BS01 1LS 2.4.2.12 GO:0005125 ... P43490 23617784 MOAD: ic50=0.007uM
    PDBbind: -logKd/Ki=8.15, IC50=0.007uM
    BindingDB: IC50=9.9nM
    13905 4jrg:A (1.9) BS01 I09 2.3.2.27 GO:0005634 ... P56273 23808545 MOAD: ic50=196nM
    PDBbind: -logKd/Ki=6.71, IC50=196nM
    13906 4jrv:A (2.8) BS01 KJV 2.7.10.1 GO:0004672 ... P00533 23611691 PDBbind: -logKd/Ki=7.54, IC50=29nM
    BindingDB: IC50=29nM
    13907 4jsa:A (1.5) BS02 FB2 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 23706138 MOAD: Ki=11uM
    PDBbind: -logKd/Ki=4.96, Ki=11uM
    BindingDB: Ki=1103nM, Kd=1149700nM
    13908 4jsa:A (1.5) BS03 FB2 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 23706138 MOAD: Ki=11uM
    PDBbind: -logKd/Ki=4.96, Ki=11uM
    BindingDB: Ki=1103nM, Kd=1149700nM
    13909 4jsc:A (2.5) BS01 1OY 2.3.2.27 GO:0005634 ... P56273 23808545 MOAD: ic50=74nM
    PDBbind: -logKd/Ki=7.13, IC50=74nM
    13910 4jsr:A (1.7) BS02 1NQ 2.3.1.286 GO:0017136 ... Q9NTG7 23570514 MOAD: ic50=0.004uM
    PDBbind: -logKd/Ki=8.40, IC50=0.004uM
    BindingDB: IC50=4.0nM
    13911 4jss:A (1.5) BS02 BEW 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 23706138 MOAD: Ki=500uM
    PDBbind: -logKd/Ki=3.30, Ki=500uM
    13912 4jsz:A (1.9) BS02 FB2 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 23706138 MOAD: Ki=5000uM
    PDBbind: -logKd/Ki=2.30, Ki=5000uM
    BindingDB: Ki=1103nM, Kd=1149700nM
    13913 4jsz:A (1.9) BS03 FB2 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 23706138 MOAD: Ki=5000uM
    PDBbind: -logKd/Ki=2.30, Ki=5000uM
    BindingDB: Ki=1103nM, Kd=1149700nM
    13914 4jt8:A (2.26) BS02 1NR 2.3.1.286 GO:0017136 ... Q9NTG7 23570514 MOAD: ic50=0.033uM
    PDBbind: -logKd/Ki=7.48, IC50=0.033uM
    BindingDB: IC50=33nM
    13915 4jt9:A (2.24) BS02 1NS 2.3.1.286 GO:0017136 ... Q9NTG7 23570514 MOAD: ic50=0.0072uM
    PDBbind: -logKd/Ki=8.14, IC50=0.0072uM
    BindingDB: IC50=7.2nM
    13916 4ju3:A (2.0) BS01 1O1 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 24176401 MOAD: ic50=0.085uM
    PDBbind: -logKd/Ki=7.07, IC50=0.085uM
    13917 4ju4:A (2.4) BS01 1O3 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 24176401 MOAD: ic50=0.34uM
    PDBbind: -logKd/Ki=6.47, IC50=0.34uM
    13918 4ju6:A (2.2) BS01 1O6 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 24176401 MOAD: ic50=0.67uM
    PDBbind: -logKd/Ki=6.17, IC50=0.67uM
    13919 4ju7:A (2.2) BS01 1O6 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 24176401 MOAD: ic50=0.67uM
    PDBbind: -logKd/Ki=6.17, IC50=0.67uM
    13920 4jv6:B (1.87) BS01 18F ? GO:0005095 ... O43924 23698361 MOAD: Kd=217nM
    PDBbind: -logKd/Ki=6.66, Kd=217nM
    BindingDB: Kd=2400nM
    13921 4jv6:B (1.87) BS02 18F ? GO:0005095 ... O43924 23698361 MOAD: Kd=217nM
    PDBbind: -logKd/Ki=6.66, Kd=217nM
    BindingDB: Kd=2400nM
    13922 4jv7:A (2.2) BS01 1MN 2.3.2.27 GO:0005634 ... Q00987 23597064 MOAD: ic50=1uM
    PDBbind: -logKd/Ki=6.00, IC50=1.0uM
    BindingDB: IC50=2000nM
    13923 4jv8:B (1.45) BS01 1M1 ? GO:0005095 ... O43924 23698361 PDBbind: -logKd/Ki=5.85, Kd=1.42uM
    13924 4jv8:B (1.45) BS02 1M1 ? GO:0005095 ... O43924 23698361 PDBbind: -logKd/Ki=5.85, Kd=1.42uM
    13925 4jv9:A (2.5) BS01 1MO 2.3.2.27 GO:0005634 ... Q00987 23597064 MOAD: ic50=1.8uM
    PDBbind: -logKd/Ki=5.74, IC50=1.8uM
    BindingDB: IC50=1800nM
    13926 4jvb:B (1.75) BS01 1M0 ? GO:0005095 ... O43924 23698361 MOAD: Kd=39nM
    PDBbind: -logKd/Ki=7.41, Kd=39nM
    BindingDB: Kd=39nM
    13927 4jve:A (2.3) BS01 1MQ 2.3.2.27 GO:0005634 ... Q00987 23597064 MOAD: ic50=0.086uM
    PDBbind: -logKd/Ki=7.07, IC50=0.086uM
    13928 4jvh:A (3.501) BS01 rna ? GO:0003676 ... Q96PU8 23630077 PDBbind: Kd=0.07uM
    13929 4jvi:A (2.9) BS01 QZN ? N/A A0A0H2Z7A6 23935486 PDBbind: -logKd/Ki=5.30, IC50=5uM
    13930 4jvj:F (2.8) BS01 1MV 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 23998921 PDBbind: -logKd/Ki=7.66, IC50=22nM
    BindingDB: IC50=390nM, Kd=3200nM
    13931 4jvq:A (2.4) BS01 1ML 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 24024973 MOAD: ic50=0.63uM
    PDBbind: -logKd/Ki=6.20, IC50=0.63uM
    13932 4jwk:A (1.87) BS01 CTN 3.1.1.29 GO:0004045 ... D0C9L6 23844024 MOAD: Kd=5.3nM
    PDBbind: -logKd/Ki=8.32, Kd=4.79nM
    13933 4jwr:A (2.35) BS01 1MY 2.3.2.27 GO:0005634 ... Q00987 23597064 MOAD: ic50=0.61uM
    PDBbind: -logKd/Ki=6.21, IC50=0.61uM
    BindingDB: IC50=610nM
    13934 4jx7:A (2.4) BS02 1N6 2.7.11.1 GO:0004672 ... P11309 23936194 MOAD: ic50=123nM
    PDBbind: -logKd/Ki=6.91, IC50=123nM
    13935 4jx9:A (1.4) BS01 URI 3.1.1.29 GO:0004045 ... D0C9L6 23844024 MOAD: Kd=1.4nM
    PDBbind: -logKd/Ki=8.62, Kd=2.4nM
    13936 4jxs:B (1.9) BS01 18U 3.5.2.6 GO:0008800 ... P00811 24835785 MOAD: Ki=18uM
    PDBbind: -logKd/Ki=4.74, Ki=18uM
    13937 4jxv:A (1.76) BS01 1MU 3.5.2.6 GO:0008800 ... P00811 24835785 MOAD: Ki=31uM
    PDBbind: -logKd/Ki=4.51, Ki=31uM
    13938 4jxw:A (2.3) BS01 1MW 3.5.2.6 GO:0008800 ... P00811 24835785 MOAD: Ki=19uM
    PDBbind: -logKd/Ki=4.72, Ki=19uM
    13939 4jxx:A (2.3) BS01 rna 6.1.1.18 GO:0000166 ... P00962 23727144 PDBbind: Kd=0.36uM
    13940 4jxz:A (2.4) BS01 rna 6.1.1.18 GO:0000166 ... P00962 23727144 PDBbind: Kd=1.84uM
    13941 4jyb:A (2.1) BS01 GNP ? GO:0003924 ... C5AP93 23873214 PDBbind: -logKd/Ki=6.96, Kd=0.11uM
    13942 4jyc:D (2.2) BS01 GDP ? GO:0003924 ... C5AP93 23873214 PDBbind: -logKd/Ki=6.70, Kd=0.20uM
    13943 4jym:A (1.35) BS01 KKN ? GO:0005515 ... Q9SZU7 23613584 PDBbind: -logKd/Ki=5.04, Kd=9.05uM
    13944 4jyt:A (2.0) BS01 N4A 3.4.21.109 GO:0004252 ... Q9Y5Y6 24900621 PDBbind: -logKd/Ki=7.40, Ki=0.04uM
    BindingDB: Ki=40nM
    13945 4jyu:H (1.8) BS01 1OK 3.4.21.21 GO:0004252 ... P08709 23845220 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    BindingDB: Ki=9.7nM
    13946 4jyv:H (2.19) BS01 1OJ 3.4.21.21 GO:0004252 ... P08709 23845220 MOAD: Ki=17nM
    PDBbind: -logKd/Ki=7.77, Ki=17nM
    BindingDB: Ki=17nM
    13947 4jyz:A (2.5) BS01 rna 6.1.1.18 GO:0000166 ... P00962 23727144 PDBbind: Kd=0.47uM
    13948 4jz1:A (1.9) BS01 F4D 3.4.21.109 GO:0004252 ... Q9Y5Y6 24900621 PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    BindingDB: Ki=200nM
    13949 4jzb:A (1.9) BS04 P2H 2.5.1.1
    2.5.1.10    		 GO:0004161 ... Q4QBL1 24598749 MOAD: Kd=342.5nM
    PDBbind: -logKd/Ki=6.47, Kd=342.5nM
    13950 4jzb:B (1.9) BS02 P2H 2.5.1.1
    2.5.1.10    		 GO:0004161 ... Q4QBL1 24598749 MOAD: Kd=342.5nM
    PDBbind: -logKd/Ki=6.47, Kd=342.5nM
    13951 4jzd:H (2.2) BS01 1NJ 3.4.21.21 GO:0004252 ... P08709 23927973 MOAD: ic50=0.005uM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    BindingDB: Ki=10nM, IC50=5.0nM
    13952 4jze:H (1.52) BS01 1NK 3.4.21.21 GO:0004252 ... P08709 23927973 MOAD: ic50=0.007uM
    PDBbind: -logKd/Ki=8.15, IC50=7nM
    BindingDB: IC50=7.0nM
    13953 4jzf:H (1.84) BS01 1NL 3.4.21.21 GO:0004252 ... P08709 23927973 MOAD: ic50=0.175uM
    PDBbind: -logKd/Ki=6.76, IC50=0.175uM
    BindingDB: IC50=175nM
    13954 4jzi:A (2.0) BS01 N4C 3.4.21.109 GO:0004252 ... Q9Y5Y6 24900621 PDBbind: -logKd/Ki=7.40, Ki=0.04uM
    BindingDB: Ki=40nM
    13955 4jzr:A (2.1) BS01 4JR 1.14.11.29 GO:0005506 ... Q9GZT9 24055079 MOAD: ic50=15.8nM
    PDBbind: -logKd/Ki=7.80, IC50=15.8nM
    BindingDB: IC50=16nM
    13956 4k0o:A (2.15) BS01 MBG ? GO:0009289 ... Q47200 24833052 PDBbind: -logKd/Ki=3.00, Kd=1mM
    13957 4k0y:A (1.954) BS01 1OA 2.7.11.1 GO:0004672 ... P11309 23623490 MOAD: Ki=15nM
    PDBbind: -logKd/Ki=7.82, Ki=15nM
    13958 4k10:A (2.3) BS02 NI9 2.5.1.1
    2.5.1.10    		 GO:0004161 ... Q4QBL1 24598749 MOAD: Kd=119.5nM
    PDBbind: -logKd/Ki=6.92, Kd=119.5nM
    13959 4k10:B (2.3) BS02 NI9 2.5.1.1
    2.5.1.10    		 GO:0004161 ... Q4QBL1 24598749 MOAD: Kd=119.5nM
    PDBbind: -logKd/Ki=6.92, Kd=119.5nM
    13960 4k18:A (2.051) BS01 1OB 2.7.11.1 GO:0004672 ... P11309 23623490 MOAD: Ki=1.1nM
    PDBbind: -logKd/Ki=8.96, Ki=1.1nM
    13961 4k19:A (2.74) BS01 1OD ? GO:0005506 ... P80188 23755875 PDBbind: -logKd/Ki=8.36, Kd=4.4nM
    BindingDB: Kd=34nM
    13962 4k1b:A (2.082) BS01 1OC 2.7.11.1 GO:0004672 ... P11309 23623490 MOAD: Ki=0.003nM
    PDBbind: -logKd/Ki=11.52, Ki=0.003nM
    BindingDB: Ki=0.003000nM
    13963 4k2f:B (1.99) BS01 A08 3.5.1.97 GO:0016787 ... Q9I194 24824984 MOAD: ic50=0.04uM
    PDBbind: -logKd/Ki=7.40, IC50=0.04uM
    13964 4k2g:B (2.3) BS01 1OQ 3.5.1.97 GO:0016787 ... Q9I194 24824984 MOAD: ic50=0.02uM
    PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    13965 4k2y:A (2.3) BS02 ES2 3.4.21.39 GO:0002003 ... P23946 23659209 MOAD: ic50=470uM
    PDBbind: -logKd/Ki=3.33, IC50=470uM
    BindingDB: IC50=470000nM
    13966 4k3h:A (2.45) BS01 1OM N/A N/A N/A 23978698 MOAD: Kd=90pM
    PDBbind: -logKd/Ki=6.85, Kd=140nM
    13967 4k3h:B (2.45) BS01 1OM N/A N/A N/A 23978698 PDBbind: -logKd/Ki=6.85, Kd=140nM
    13968 4k3k:A (1.85) BS04 SFK 2.7.7.7 GO:0003677 ... P0A988 24090409 MOAD: ic50=4.44mM
    PDBbind: -logKd/Ki=2.35, IC50=4.44mM
    13969 4k3l:A (1.5) BS01 LEU 2.7.7.7 GO:0003677 ... P0A988 24090409 PDBbind: -logKd/Ki=2.96, IC50=1.1mM
    13970 4k3l:A (1.5) BS02 PHE 2.7.7.7 GO:0003677 ... P0A988 24090409 PDBbind: -logKd/Ki=2.96, IC50=1.1mM
    13971 4k3n:A (2.0) BS04 1OT 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 23713488 MOAD: Ki=0.011uM
    PDBbind: -logKd/Ki=7.96, Ki=11nM
    13972 4k3n:F (2.0) BS04 1OT 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 23713488 MOAD: Ki=0.011uM
    PDBbind: -logKd/Ki=7.96, Ki=11nM
    13973 4k42:A (2.9) BS02 NWM 3.6.4.- GO:0000287 ... P68135 25047814 PDBbind: -logKd/Ki=6.55, Kd=285nM
    13974 4k43:A (2.9) BS02 1PO 3.6.4.- GO:0000287 ... P68135 25047814 PDBbind: -logKd/Ki=6.88, Kd=132nM
    13975 4k4e:A (2.3) BS02 K4E 2.4.2.-
    2.4.2.30    		 GO:0003950 ... O95271 23701517 PDBbind: -logKd/Ki=7.62, IC50=24nM
    13976 4k4f:A (2.9) BS02 K4F 2.4.2.-
    2.4.2.30    		 GO:0003950 ... O95271 23701517 PDBbind: -logKd/Ki=6.70, IC50=0.20uM
    13977 4k4j:A (2.0) BS02 1O8 ? GO:0003677 ... P19793 24187139 PDBbind: -logKd/Ki=6.12, Kd=0.752uM
    BindingDB: EC50=820nM, Kd=33nM
    13978 4k55:A (1.91) BS01 H6P ? N/A O00481 23872678 MOAD: Kd=3.06uM
    PDBbind: -logKd/Ki=5.51, Kd=3.06uM
    BindingDB: EC50=0.510000nM, IC50=16100nM, Kd=1540nM
    13979 4k5l:A (1.91) BS02 19N 3.4.11.- GO:0006508 ... O96935 23713488 MOAD: Ki=11uM
    PDBbind: -logKd/Ki=4.96, Ki=11uM
    13980 4k5m:A (1.75) BS02 1OV 3.4.11.- GO:0006508 ... O96935 23713488 MOAD: Ki=193uM
    PDBbind: -logKd/Ki=3.71, Ki=193uM
    13981 4k5n:A (1.91) BS02 1OU 3.4.11.- GO:0006508 ... O96935 23713488 MOAD: Ki=127uM
    PDBbind: -logKd/Ki=3.90, Ki=127uM
    13982 4k5o:A (1.9) BS02 1OT 3.4.11.- GO:0006508 ... O96935 23713488 MOAD: Ki=104uM
    PDBbind: -logKd/Ki=3.98, Ki=104uM
    13983 4k5p:A (1.85) BS02 1OS 3.4.11.- GO:0006508 ... O96935 23713488 MOAD: Ki=345uM
    PDBbind: -logKd/Ki=3.46, Ki=345uM
    13984 4k5y:A (2.977) BS01 1Q5 ?
    3.2.1.17    		 GO:0003796 ... P00720
    P34998    		 23863939 PDBbind: -logKd/Ki=8.17, Kd=6.7nM
    13985 4k5z:A (1.8) BS02 1P7 3.4.21.39 GO:0002003 ... P23946 23659209 PDBbind: -logKd/Ki=3.00, IC50>1000uM
    BindingDB: IC50=>1000000nM
    13986 4k60:A (1.5) BS02 1P8 3.4.21.39 GO:0002003 ... P23946 23659209 MOAD: ic50=570uM
    PDBbind: -logKd/Ki=3.24, IC50=570uM
    BindingDB: IC50=570000nM
    13987 4k63:A (3.1) BS01 SIA ? GO:0019031 ... A8HWY8 23641058 PDBbind: -logKd/Ki=4.22, Kd=60uM
    13988 4k64:A (2.604) BS01 SIA ? GO:0019031 ... A8HWY8 23641058 PDBbind: -logKd/Ki=3.00, Kd>1mM
    13989 4k66:A (3.005) BS01 SIA ? GO:0019031 ... A8HWY8 23641058 PDBbind: -logKd/Ki=3.26, Kd=554uM
    13990 4k67:A (2.7) BS01 SIA ? GO:0019031 ... A8HWY8 23641058 PDBbind: -logKd/Ki=3.43, Kd=372uM
    13991 4k69:A (1.5) BS03 1P9 3.4.21.39 GO:0002003 ... P23946 23659209 MOAD: ic50=0.04uM
    PDBbind: -logKd/Ki=7.40, IC50=0.04uM
    BindingDB: IC50=40nM
    13992 4k6i:A (2.1) BS02 9RA ? GO:0003677 ... P19793 24187139 PDBbind: -logKd/Ki=6.20, Kd=0.629uM
    BindingDB: EC50=33nM, Kd=36nM, Ki=379nM
    13993 4k6t:A (2.0) BS01 SIA ? GO:0007155 ... Q64823 26177934 PDBbind: -logKd/Ki=4.10, Kd=78.6uM
    13994 4k6t:A (2.0) BS02 SIA ? GO:0007155 ... Q64823 26177934 PDBbind: -logKd/Ki=4.10, Kd=78.6uM
    13995 4k6t:B (2.0) BS01 SIA ? GO:0007155 ... Q64823 26177934 PDBbind: -logKd/Ki=4.10, Kd=78.6uM
    13996 4k6t:C (2.0) BS01 SIA ? GO:0007155 ... Q64823 26177934 PDBbind: -logKd/Ki=4.10, Kd=78.6uM
    13997 4k6u:A (1.9) BS02 SIA ? GO:0007155 ... Q64823 26177934 PDBbind: -logKd/Ki=4.14, Kd=72.8uM
    13998 4k6u:B (1.9) BS01 SIA ? GO:0007155 ... Q64823 26177934 PDBbind: -logKd/Ki=4.14, Kd=72.8uM
    13999 4k6u:B (1.9) BS03 SIA ? GO:0007155 ... Q64823 26177934 PDBbind: -logKd/Ki=4.14, Kd=72.8uM
    14000 4k6u:C (1.9) BS01 SIA ? GO:0007155 ... Q64823 26177934 PDBbind: -logKd/Ki=4.14, Kd=72.8uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218