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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    13201 4gcl:E (2.65) BS01 dna ? GO:0000976 ... Q1R4V1 23754405 PDBbind: Kd=156.5nM
    13202 4gcl:E (2.65) BS02 dna ? GO:0000976 ... Q1R4V1 23754405 PDBbind: Kd=156.5nM
    13203 4gcl:F (2.65) BS01 dna ? GO:0000976 ... Q1R4V1 23754405 PDBbind: Kd=156.5nM
    13204 4gcl:G (2.65) BS01 dna ? GO:0000976 ... Q1R4V1 23754405 PDBbind: Kd=156.5nM
    13205 4gcl:G (2.65) BS02 dna ? GO:0000976 ... Q1R4V1 23754405 PDBbind: Kd=156.5nM
    13206 4gcl:H (2.65) BS01 dna ? GO:0000976 ... Q1R4V1 23754405 PDBbind: Kd=156.5nM
    13207 4gct:A (2.45) BS01 dna ? GO:0000976 ... Q9KVD2 23754405 PDBbind: Kd=53.4nM
    13208 4gct:A (2.45) BS02 dna ? GO:0000976 ... Q9KVD2 23754405 PDBbind: Kd=53.4nM
    13209 4gct:B (2.45) BS01 dna ? GO:0000976 ... Q9KVD2 23754405 PDBbind: Kd=53.4nM
    13210 4gct:C (2.45) BS01 dna ? GO:0000976 ... Q9KVD2 23754405 PDBbind: Kd=53.4nM
    13211 4gct:C (2.45) BS02 dna ? GO:0000976 ... Q9KVD2 23754405 PDBbind: Kd=53.4nM
    13212 4gct:D (2.45) BS01 dna ? GO:0000976 ... Q9KVD2 23754405 PDBbind: Kd=53.4nM
    13213 4gct:D (2.45) BS02 dna ? GO:0000976 ... Q9KVD2 23754405 PDBbind: Kd=53.4nM
    13214 4gd6:A (1.53) BS01 17K 3.5.2.6 GO:0008800 ... P0AD64 23145056 PDBbind: -logKd/Ki=7.38, Ki=0.042uM
    13215 4gdy:A (2.89) BS01 0X1 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 N/A PDBbind: -logKd/Ki=7.08, IC50=84nM
    13216 4gdy:A (2.89) BS02 0X1 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 N/A PDBbind: -logKd/Ki=7.08, IC50=84nM
    13217 4gdy:B (2.89) BS01 0X1 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 N/A PDBbind: -logKd/Ki=7.08, IC50=84nM
    13218 4gdy:B (2.89) BS02 0X1 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 N/A PDBbind: -logKd/Ki=7.08, IC50=84nM
    13219 4ge1:A (2.15) BS01 TSS ? GO:0005576 ... Q86PT9 23275168 PDBbind: -logKd/Ki=6.43, Kd=370nM
    13220 4ge2:A (1.8) BS01 75A 3.1.3.48 GO:0004725 ... P43378 23075115 MOAD: ic50=0.9uM
    PDBbind: -logKd/Ki=6.05, IC50=0.90uM
    13221 4ge4:A (2.41) BS01 0KE 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.11, Ki=7.7nM
    13222 4ge4:A (2.41) BS02 0KE 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.11, Ki=7.7nM
    13223 4ge4:B (2.41) BS01 0KE 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.11, Ki=7.7nM
    13224 4ge4:B (2.41) BS02 0KE 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.11, Ki=7.7nM
    13225 4ge5:A (2.0) BS01 A89 3.1.3.48 GO:0004725 ... P43378 23075115 MOAD: ic50=0.27uM
    PDBbind: -logKd/Ki=6.57, IC50=0.27uM
    13226 4ge6:A (1.4) BS01 B26 3.1.3.48 GO:0004725 ... P43378 23075115 MOAD: Ki=34nM
    PDBbind: -logKd/Ki=7.47, Ki=34nM
    13227 4ge7:A (2.1) BS01 0K5 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.15, Ki=7.1nM
    13228 4ge7:A (2.1) BS02 0K5 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.15, Ki=7.1nM
    13229 4ge7:B (2.1) BS01 0K5 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.15, Ki=7.1nM
    13230 4ge7:B (2.1) BS02 0K5 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.15, Ki=7.1nM
    13231 4ge9:A (2.43) BS01 0L0 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.80, Ki=1.6nM
    13232 4ge9:A (2.43) BS02 0L0 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.80, Ki=1.6nM
    13233 4ge9:B (2.43) BS01 0L0 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.80, Ki=1.6nM
    13234 4ge9:B (2.43) BS02 0L0 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.80, Ki=1.6nM
    13235 4gee:A (1.7) BS01 0WT 5.6.2.2 GO:0003677 ... Q839Z1 23352267 MOAD: Ki<1nM
    PDBbind: -logKd/Ki=9.00, Ki<1nM
    13236 4gfd:A (1.8) BS01 0YB 2.7.4.9 GO:0004798 ... P65248 22908966 MOAD: Ki=330pM
    PDBbind: -logKd/Ki=9.48, Ki=0.33nM
    13237 4gfm:A (2.3) BS01 0X2 2.7.10.2 GO:0004672 ... O60674 23867602 MOAD: Ki=0.06uM
    PDBbind: -logKd/Ki=7.22, Ki=0.06uM
    13238 4gfn:A (1.9) BS01 SUY 5.6.2.2 GO:0003677 ... Q839Z1 23352267 MOAD: Ki=5nM
    PDBbind: -logKd/Ki=8.30, Ki=5nM
    13239 4gfo:A (2.3) BS01 0X2 2.7.10.2 GO:0004672 ... P29597 23867602 MOAD: Ki=0.24uM
    PDBbind: -logKd/Ki=6.62, Ki=0.24uM
    13240 4gg5:A (2.423) BS01 0J3 2.7.10.1 GO:0004672 ... P08581 22985853 MOAD: ic50=0.93nM
    PDBbind: -logKd/Ki=9.03, IC50=0.93nM
    BindingDB: IC50=0.930000nM
    13241 4gg7:A (2.27) BS01 0J8 2.7.10.1 GO:0004672 ... P08581 22985853 MOAD: ic50=6.5nM
    PDBbind: -logKd/Ki=8.20, Ki=6.3nM
    BindingDB: IC50=6.5nM
    13242 4ggl:A (1.69) BS01 CJC 5.6.2.2 GO:0003677 ... Q839Z1 23352267 MOAD: Ki<1nM
    PDBbind: -logKd/Ki=9.00, Ki<1nM
    13243 4ggz:A (1.75) BS01 BTN ? GO:0009374 ... Q89U61 23661323 MOAD: Kd=0.066nM
    PDBbind: -logKd/Ki=10.18, Kd=0.066nM
    13244 4gh6:A (2.7) BS01 LUO 3.1.4.35 GO:0004114 ... O76083 22985069 PDBbind: -logKd/Ki=7.68, IC50=0.021uM
    13245 4gha:A (2.5) BS01 rna ? N/A P35259 23028316 PDBbind: Kd=0.5uM
    13246 4gha:A (2.5) BS02 rna ? N/A P35259 23028316 PDBbind: Kd=0.5uM
    13247 4gha:C (2.5) BS01 rna ? N/A P35259 23028316 PDBbind: Kd=0.5uM
    13248 4gha:E (2.5) BS01 rna ? N/A P35259 23028316 PDBbind: Kd=0.5uM
    13249 4gha:E (2.5) BS02 rna ? N/A P35259 23028316 PDBbind: Kd=0.5uM
    13250 4gha:G (2.5) BS01 rna ? N/A P35259 23028316 PDBbind: Kd=0.5uM
    13251 4gha:G (2.5) BS02 rna ? N/A P35259 23028316 PDBbind: Kd=0.5uM
    13252 4ghi:A (1.5) BS01 0X3 ? N/A Q99814 23434853 MOAD: Kd=81nM
    PDBbind: -logKd/Ki=7.09, Kd=81nM
    BindingDB: Kd=90nM, IC50=490nM
    13253 4ghl:D (2.02) BS01 rna ? N/A Q03039 23185024 PDBbind: Kd=6.6uM
    13254 4ghl:D (2.02) BS02 rna ? N/A Q03039 23185024 PDBbind: Kd=6.6uM
    13255 4ght:A (1.96) BS01 AG7 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15    		 GO:0004197 ... A9XG43 23633597 PDBbind: -logKd/Ki=5.78, IC50=1.67uM
    13256 4gid:A (2.0) BS01 0GH 3.4.23.46 GO:0004190 ... P56817 22954357 MOAD: Ki=0.017nM
    PDBbind: -logKd/Ki=10.77, Ki=0.017nM
    13257 4gih:A (2.0) BS01 0X5 2.7.10.2 GO:0004672 ... P29597 23867602 MOAD: Ki=0.0048uM
    PDBbind: -logKd/Ki=8.32, Ki=0.0048uM
    BindingDB: Ki=4.8nM
    13258 4gii:A (2.31) BS01 0X6 2.7.10.2 GO:0004672 ... P29597 23668484 MOAD: Ki=1.8nM
    PDBbind: -logKd/Ki=8.74, Ki=1.8nM
    13259 4giu:A (1.667) BS04 636 2.4.2.18 GO:0000162 ... P9WFX5 24623674 MOAD: Ki=4.7uM
    PDBbind: -logKd/Ki=5.33, Ki=4.7uM
    13260 4gj2:A (2.4) BS01 0XH 2.7.10.2 GO:0004672 ... P29597 23668484 MOAD: Ki=2.5nM
    PDBbind: -logKd/Ki=8.60, Ki=2.5nM
    13261 4gj3:A (2.5) BS01 0XP 2.7.10.2 GO:0004672 ... P29597 23668484 MOAD: Ki=1.4nM
    PDBbind: -logKd/Ki=8.85, Ki=1.4nM
    13262 4gj6:A (2.58) BS01 0LS 3.4.23.15 GO:0004190 ... P00797 23425156 PDBbind: -logKd/Ki=5.12, IC50=7.6uM
    BindingDB: IC50=14000nM
    13263 4gj6:A (2.58) BS02 0LS 3.4.23.15 GO:0004190 ... P00797 23425156 PDBbind: -logKd/Ki=5.12, IC50=7.6uM
    BindingDB: IC50=14000nM
    13264 4gj6:A (2.58) BS03 0LS 3.4.23.15 GO:0004190 ... P00797 23425156 PDBbind: -logKd/Ki=5.12, IC50=7.6uM
    BindingDB: IC50=14000nM
    13265 4gj7:A (2.8) BS01 0LT 3.4.23.15 GO:0004190 ... P00797 23425156 PDBbind: -logKd/Ki=6.77, IC50=0.17uM
    BindingDB: IC50=170nM
    13266 4gj8:A (2.5) BS01 0LU 3.4.23.15 GO:0004190 ... P00797 23360239 PDBbind: -logKd/Ki=3.30, Kd>500uM
    BindingDB: Kd=>500000nM
    13267 4gj8:A (2.5) BS02 0LU 3.4.23.15 GO:0004190 ... P00797 23360239 PDBbind: -logKd/Ki=3.30, Kd>500uM
    BindingDB: Kd=>500000nM
    13268 4gj9:A (2.6) BS01 0M2 3.4.23.15 GO:0004190 ... P00797 23360239 PDBbind: -logKd/Ki=3.30, Kd>500uM
    13269 4gja:A (2.6) BS01 0M3 3.4.23.15 GO:0004190 ... P00797 23360239 PDBbind: -logKd/Ki=5.92, IC50=1.2uM
    BindingDB: IC50=500nM
    13270 4gjb:A (2.75) BS01 0ME 3.4.23.15 GO:0004190 ... P00797 23360239 PDBbind: -logKd/Ki=4.00, IC50>100uM
    13271 4gjc:A (2.4) BS01 0MJ 3.4.23.15 GO:0004190 ... P00797 23360239 MOAD: ic50=0.09uM
    PDBbind: -logKd/Ki=7.05, IC50=0.09uM
    BindingDB: IC50=90nM
    13272 4gjd:A (2.65) BS01 0N0 3.4.23.15 GO:0004190 ... P00797 23360239 PDBbind: -logKd/Ki=8.52, IC50=0.003uM
    BindingDB: IC50=3.0nM
    13273 4gk2:A (2.195) BS01 L66 2.7.10.1 GO:0004672 ... P29320 23253074 PDBbind: -logKd/Ki=8.80, IC50=1.6nM
    BindingDB: IC50=40nM
    13274 4gk3:A (1.898) BS01 L87 2.7.10.1 GO:0004672 ... P29320 23253074 PDBbind: -logKd/Ki=7.25, IC50=56nM
    13275 4gk4:A (2.1) BS01 L90 2.7.10.1 GO:0004672 ... P29320 23253074 PDBbind: -logKd/Ki=7.85, IC50=14nM
    13276 4gkc:A (1.3) BS01 RET ? GO:0005501 ... P50120 23224553 PDBbind: -logKd/Ki=6.82, Kd=150nM
    13277 4gkh:A (1.863) BS02 0J9 N/A GO:0005524 ... N/A 23758273 PDBbind: -logKd/Ki=4.67, Ki=21.5uM
    13278 4gki:A (1.88) BS02 0JN N/A GO:0005524 ... N/A 23758273 PDBbind: -logKd/Ki=4.46, Ki=34.4uM
    13279 4gkm:A (1.6683) BS04 683 2.4.2.18 GO:0000162 ... P9WFX5 24623674 MOAD: Ki=6.8uM
    PDBbind: -logKd/Ki=5.17, Ki=6.8uM
    13280 4glw:A (2.0) BS01 0XT 6.5.1.2 GO:0003911 ... C1CKI0 23006603 MOAD: Kd=0.8uM
    PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    13281 4glx:A (1.9) BS05 0XS 6.5.1.2 GO:0003677 ... P15042 23006603 PDBbind: -logKd/Ki=7.80, Kd=16nM
    13282 4gmc:B (2.7) BS01 1BI 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 N/A PDBbind: -logKd/Ki=7.74, IC50=0.018uM
    13283 4gmy:A (2.403) BS01 0X5 2.7.10.2 GO:0004672 ... O60674 23867602 MOAD: Ki=0.028uM
    PDBbind: -logKd/Ki=7.55, Ki=0.028uM
    BindingDB: Ki=28nM, EC50=1700nM
    13284 4gny:A (1.6367) BS01 SDS ? GO:0005515 ... P02754 23334914 PDBbind: -logKd/Ki=4.22, Kd=60uM
    13285 4gq4:A (1.27) BS01 0RT ? GO:0005634 ... O00255 22936661 PDBbind: -logKd/Ki=7.66, Kd=22nM
    BindingDB: IC50=190nM
    13286 4gql:A (1.15) BS06 R47 3.4.24.65 GO:0004222 ... P39900 23343195 MOAD: Ki=0.26nM
    PDBbind: -logKd/Ki=9.59, Ki=0.26nM
    BindingDB: Ki=0.260000nM
    13287 4gqp:H (2.0) BS01 B40 N/A N/A N/A 24419156 MOAD: Kd=0.79nM
    PDBbind: -logKd/Ki=9.60, Kd=0.25nM
    13288 4gqq:A (1.35) BS01 0XR 3.2.1.1 GO:0003824 ... P04746 23050660 PDBbind: -logKd/Ki=2.89, Ki=1.3mM
    13289 4gqq:A (1.35) BS02 0XR 3.2.1.1 GO:0003824 ... P04746 23050660 PDBbind: -logKd/Ki=2.89, Ki=1.3mM
    13290 4gqq:A (1.35) BS03 0XR 3.2.1.1 GO:0003824 ... P04746 23050660 PDBbind: -logKd/Ki=2.89, Ki=1.3mM
    13291 4gqr:A (1.2) BS02 MYC 3.2.1.1 GO:0003824 ... P04746 23050660 MOAD: Ki=110uM
    PDBbind: -logKd/Ki=3.96, Ki=110uM
    13292 4gr0:A (1.497) BS06 R4B 3.4.24.65 GO:0004222 ... P39900 23343195 MOAD: Ki=0.28nM
    PDBbind: -logKd/Ki=9.55, Ki=0.28nM
    BindingDB: Ki=0.280000nM
    13293 4gr3:A (1.494) BS06 R45 3.4.24.65 GO:0004222 ... P39900 23343195 MOAD: Ki=15.5nM
    PDBbind: -logKd/Ki=7.81, Ki=15.5nM
    BindingDB: Ki=16nM
    13294 4gr8:A (1.299) BS06 R4C 3.4.24.65 GO:0004222 ... P39900 23343195 MOAD: Ki=14.7nM
    PDBbind: -logKd/Ki=7.83, Ki=14.7nM
    BindingDB: Ki=15nM
    13295 4gs6:A (2.2) BS01 1FM 2.7.11.25 GO:0000287 ... O43318
    Q15750    		 23272696 PDBbind: -logKd/Ki=7.15, Ki=0.071uM
    13296 4gs8:A (2.99) BS01 MGJ 3.4.24.56 GO:0001618 ... P14735 24735644 PDBbind: -logKd/Ki=7.00, IC50=0.1uM
    BindingDB: IC50=100nM, EC50=530nM
    13297 4gsc:A (2.81) BS02 MGW 3.4.24.56 GO:0001618 ... P14735 24735644 PDBbind: -logKd/Ki=5.85, IC50=1.4uM
    13298 4gsy:A (1.71) BS01 0Y5 2.7.4.9 GO:0004798 ... Q6GJI9 23043329 MOAD: ic50=120nM
    PDBbind: -logKd/Ki=6.92, IC50=120nM
    13299 4gtm:B (2.2) BS03 7TM 2.5.1.58 GO:0003824 ... Q02293 22963166 MOAD: ic50=9.2nM
    PDBbind: -logKd/Ki=8.04, IC50=9.2nM
    13300 4gto:B (2.15) BS02 7TO 2.5.1.58 GO:0003824 ... Q02293 22963166 MOAD: ic50=10.5nM
    PDBbind: -logKd/Ki=7.98, IC50=10.5nM
    13301 4gtp:B (2.75) BS03 7TP 2.5.1.58 GO:0003824 ... Q02293 22963166 PDBbind: -logKd/Ki=7.94, IC50=11.4nM
    13302 4gtq:B (2.6) BS03 7TQ 2.5.1.58 GO:0003824 ... Q02293 22963166 PDBbind: -logKd/Ki=8.30, IC50<5nM
    13303 4gtr:B (2.2) BS02 7TR 2.5.1.58 GO:0003824 ... Q02293 22963166 PDBbind: -logKd/Ki=8.30, IC50<5nM
    13304 4gts:B (2.45) BS03 7TP 2.5.1.60 GO:0003824 ... Q08603 22963166 MOAD: ic50=12.8nM
    PDBbind: -logKd/Ki=7.89, IC50=12.8nM
    13305 4gtt:B (2.05) BS03 7TQ 2.5.1.60 GO:0003824 ... Q08603 22963166 MOAD: ic50=6nM
    PDBbind: -logKd/Ki=8.22, IC50=6nM
    13306 4gtv:B (1.95) BS03 7TR 2.5.1.60 GO:0003824 ... Q08603 22963166 MOAD: ic50=38nM
    PDBbind: -logKd/Ki=7.42, IC50=38nM
    13307 4gu6:A (1.95) BS01 10N 2.7.10.2 GO:0004672 ... Q05397 23294348 MOAD: Kd=44nM
    PDBbind: -logKd/Ki=7.36, Kd=44nM
    BindingDB: IC50=195nM, Kd=44nM
    13308 4gu9:A (2.4) BS01 4GU 2.7.10.2 GO:0004672 ... Q05397 23294348 MOAD: Kd=43uM
    PDBbind: -logKd/Ki=4.37, Kd=43uM
    13309 4gue:A (1.8) BS01 QCT 2.7.11.1 GO:0004672 ... P18654 23385462 MOAD: Kd=5.8uM
    PDBbind: -logKd/Ki=5.24, Kd=5.8uM
    13310 4gui:A (1.78) BS01 QIC 4.2.1.10 GO:0003855 ... P58687 24437575 PDBbind: -logKd/Ki=3.64, Kd=0.23mM
    13311 4guj:A (1.5) BS01 SKM 4.2.1.10 GO:0003855 ... P58687 24437575 PDBbind: -logKd/Ki=3.05, Kd=0.9mM
    13312 4guq:A (3.7) BS01 dna ? GO:0000976 ... O15350 23892287 PDBbind: Kd=4480nM
    13313 4guq:A (3.7) BS02 dna ? GO:0000976 ... O15350 23892287 PDBbind: Kd=4480nM
    13314 4guq:B (3.7) BS01 dna ? GO:0000976 ... O15350 23892287 PDBbind: Kd=4480nM
    13315 4gv1:A (1.49) BS01 0XZ 2.7.11.1 GO:0004672 ... P31749 23394218 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=4.2nM
    13316 4gv8:A (2.1) BS01 DUP 3.6.1.23 GO:0000287 ... Q8SDV3 24311572 MOAD: Kd=0.32uM
    PDBbind: -logKd/Ki=6.49, Kd=0.32uM
    13317 4gv8:A (2.1) BS02 DUP 3.6.1.23 GO:0000287 ... Q8SDV3 24311572 MOAD: Kd=0.32uM
    PDBbind: -logKd/Ki=6.49, Kd=0.32uM
    13318 4gv8:B (2.1) BS01 DUP 3.6.1.23 GO:0000287 ... Q8SDV3 24311572 MOAD: Kd=0.32uM
    PDBbind: -logKd/Ki=6.49, Kd=0.32uM
    13319 4gv8:B (2.1) BS02 DUP 3.6.1.23 GO:0000287 ... Q8SDV3 24311572 MOAD: Kd=0.32uM
    PDBbind: -logKd/Ki=6.49, Kd=0.32uM
    13320 4gv8:C (2.1) BS01 DUP 3.6.1.23 GO:0000287 ... Q8SDV3 24311572 MOAD: Kd=0.32uM
    PDBbind: -logKd/Ki=6.49, Kd=0.32uM
    13321 4gv8:C (2.1) BS02 DUP 3.6.1.23 GO:0000287 ... Q8SDV3 24311572 MOAD: Kd=0.32uM
    PDBbind: -logKd/Ki=6.49, Kd=0.32uM
    13322 4gvm:A (2.16) BS01 LF2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23615903 MOAD: ic50=1.49uM
    PDBbind: -logKd/Ki=6.11, IC50=0.78uM
    BindingDB: IC50=1.7e+2nM
    13323 4gw6:A (2.65) BS01 LF2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23615903 PDBbind: -logKd/Ki=6.20, IC50=0.63uM
    BindingDB: IC50=1.7e+2nM
    13324 4gw8:A (2.0) BS02 3RA 2.7.11.1 GO:0004672 ... P11309 22998443 MOAD: ic50=0.88uM
    PDBbind: -logKd/Ki=6.06, IC50=0.88uM
    13325 4gxs:B (1.9634) BS01 0YS ? GO:0015276 ... P19491 23076153 PDBbind: -logKd/Ki=4.00, IC50>100uM
    13326 4gxs:D (1.9634) BS01 0YS ? GO:0015276 ... P19491 23076153 PDBbind: -logKd/Ki=4.00, IC50>100uM
    13327 4gz3:A (1.9) BS02 UDP 2.4.1.255 N/A O15294 23103939 PDBbind: -logKd/Ki=5.74, IC50=1.8uM
    BindingDB: IC50=1800nM
    13328 4gzn:C (0.99) BS01 dna ? N/A Q8C6P8 23059534 PDBbind: Kd=8nM
    13329 4gzn:C (0.99) BS02 dna ? N/A Q8C6P8 23059534 PDBbind: Kd=8nM
    13330 4gzp:A (2.3) BS02 G39 3.2.1.18 GO:0004308 ... K7N5N3 23015718 MOAD: Ki=14.3nM
    PDBbind: -logKd/Ki=7.84, Ki=14.3nM
    13331 4gzt:A (2.19) BS02 G39 3.2.1.18 GO:0004308 ... K7N5N3 23015718 MOAD: Ki=17nM
    PDBbind: -logKd/Ki=7.77, Ki=17.0nM
    13332 4gzw:A (2.45) BS01 SIA 3.2.1.18 GO:0004308 ... K7N5N3 23015718 PDBbind: -logKd/Ki=4.52, Kd=30.0uM
    13333 4gzx:A (2.45) BS01 SIA 3.2.1.18 GO:0004308 ... K7N5N3 23015718 PDBbind: -logKd/Ki=3.19, Kd=645uM
    13334 4h10:A (2.402) BS01 dna ? GO:0003700 ... O00327 23229515 PDBbind: Kd=1.52uM
    13335 4h10:A (2.402) BS02 dna ? GO:0003700 ... O00327 23229515 PDBbind: Kd=1.52uM
    13336 4h10:B (2.402) BS01 dna 2.3.1.48 GO:0000981 ... O15516 23229515 PDBbind: Kd=1.52uM
    13337 4h10:B (2.402) BS02 dna 2.3.1.48 GO:0000981 ... O15516 23229515 PDBbind: Kd=1.52uM
    13338 4h1e:A (1.9) BS01 10J 3.4.23.46 GO:0004190 ... P56817 22989333 MOAD: Ki=3nM
    PDBbind: -logKd/Ki=8.52, Ki=3nM
    13339 4h1j:A (2.0) BS01 0YH 2.7.10.2 GO:0004672 ... Q14289 23153798 MOAD: ic50=1200nM
    PDBbind: -logKd/Ki=5.92, IC50=1200nM
    BindingDB: IC50=1200nM
    13340 4h1m:A (1.99) BS01 0YJ 2.7.10.2 GO:0004672 ... Q14289 23153798 MOAD: ic50=78nM
    PDBbind: -logKd/Ki=7.11, IC50=78nM
    BindingDB: IC50=78nM
    13341 4h2j:A (1.81) BS01 0YU 2.5.1.31 GO:0000287 ... P60472 23248302 PDBbind: -logKd/Ki=5.32, IC50=4.8uM
    13342 4h2m:A (1.78) BS01 0YV 2.5.1.31 GO:0000287 ... P60472 23248302 PDBbind: -logKd/Ki=5.21, IC50=6.1uM
    13343 4h2o:B (2.14) BS01 0YW 2.5.1.31 GO:0000287 ... P60472 23248302 PDBbind: -logKd/Ki=5.52, IC50=3.0uM
    13344 4h2o:B (2.14) BS02 0YW 2.5.1.31 GO:0000287 ... P60472 23248302 PDBbind: -logKd/Ki=5.52, IC50=3.0uM
    13345 4h38:A (1.95) BS01 0YX 2.5.1.31 GO:0000287 ... P60472 23248302 PDBbind: -logKd/Ki=6.04, IC50=0.92uM
    13346 4h3a:A (1.98) BS01 0YY 2.5.1.31 GO:0000287 ... P60472 23248302 PDBbind: -logKd/Ki=6.29, IC50=0.51uM
    13347 4h3c:A (1.93) BS01 0YZ 2.5.1.31 GO:0000287 ... P60472 23248302 PDBbind: -logKd/Ki=5.72, IC50=1.9uM
    13348 4h3c:A (1.93) BS02 0YZ 2.5.1.31 GO:0000287 ... P60472 23248302 PDBbind: -logKd/Ki=5.72, IC50=1.9uM
    13349 4h3f:A (1.7) BS01 10O 3.4.23.46 GO:0004190 ... P56817 22989333 MOAD: Ki=1nM
    PDBbind: -logKd/Ki=9.00, Ki=1nM
    13350 4h3g:A (1.85) BS01 10Q 3.4.23.46 GO:0004190 ... P56817 22989333 MOAD: Ki=6nM
    PDBbind: -logKd/Ki=8.22, Ki=6nM
    13351 4h3i:A (1.96) BS01 10V 3.4.23.46 GO:0004190 ... P56817 22989333 MOAD: Ki=3nM
    PDBbind: -logKd/Ki=8.52, Ki=3nM
    13352 4h3j:A (1.6) BS01 10W 3.4.23.46 GO:0004190 ... P56817 22989333 MOAD: Ki=90nM
    PDBbind: -logKd/Ki=7.05, Ki=90nM
    13353 4h42:U (2.01) BS01 11E 3.4.21.73 GO:0004252 ... P00749 N/A PDBbind: -logKd/Ki=3.47, Ki=341uM
    13354 4h4b:A (2.9) BS01 11H 2.7.1.77
    3.1.3.5
    3.1.3.99    		 GO:0000255 ... P49902 23220537 PDBbind: -logKd/Ki=2.70, Ki=2.0mM
    13355 4h4d:A (1.35) BS02 10E 1.17.7.4 GO:0005829 ... P62623 23307751 MOAD: ic50=0.15uM
    PDBbind: -logKd/Ki=6.82, IC50=0.15uM
    13356 4h4e:A (1.7) BS02 10G 1.17.7.4 GO:0005829 ... P62623 23307751 MOAD: ic50=0.21uM
    PDBbind: -logKd/Ki=6.68, IC50=0.21uM
    13357 4h4m:A (2.85) BS01 494 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 23163887 PDBbind: -logKd/Ki=8.52, IC50=3.0nM
    13358 4h58:A (3.1) BS01 10Z 2.7.11.1 GO:0004672 ... P15056 23398453 PDBbind: -logKd/Ki=6.72, IC50=0.192uM
    13359 4h5c:F (2.02) BS01 YS4 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 23234314 PDBbind: -logKd/Ki=7.55, IC50=28nM
    BindingDB: IC50=28nM
    13360 4h5d:F (2.02) BS01 YS4 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 23234314 MOAD: Kd=0.58uM
    PDBbind: -logKd/Ki=7.55, IC50=28nM
    BindingDB: IC50=28nM
    13361 4h5e:F (2.04) BS02 IPR 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 23234314 PDBbind: -logKd/Ki=6.07, Kd=0.86uM
    13362 4h71:A (1.93) BS01 PXE 2.7.11.21 N/A P53350 23135290 PDBbind: -logKd/Ki=4.45, IC50=35.57uM
    13363 4h7q:A (2.1) BS02 COI 2.7.11.1
    2.7.11.4    		 GO:0004672 ... Q00972 23716694 PDBbind: -logKd/Ki=5.06, Kd=8.8uM
    13364 4h81:A (2.05) BS02 WJ2 2.7.11.1
    2.7.11.4    		 GO:0004672 ... Q00972 23716694 PDBbind: -logKd/Ki=5.12, Kd=7.5uM
    13365 4h85:A (2.1) BS02 HRI 2.7.11.1
    2.7.11.4    		 GO:0004672 ... Q00972 23716694 PDBbind: -logKd/Ki=5.15, Kd=7.0uM
    13366 4ha5:A (1.83) BS01 13W 3.4.23.46 GO:0004190 ... P56817 22989333 MOAD: Ki=56nM
    PDBbind: -logKd/Ki=7.24, Ki=58nM
    13367 4hai:A (2.55) BS02 I23 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 23237835 PDBbind: -logKd/Ki=8.10, IC50=7.9nM
    BindingDB: IC50=7.9nM
    13368 4hbm:A (1.9) BS01 0Y7 2.3.2.27 GO:0005634 ... Q00987 22991965 MOAD: Kd=12nM
    PDBbind: -logKd/Ki=7.92, Kd=12.0nM
    13369 4hbn:A (2.6) BS01 CMP ? N/A Q9Y3Q4 23103389 PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    13370 4hbp:A (2.91) BS01 17J 3.1.1.-
    3.5.1.99    		 GO:0000139 ... P97612 23218778 PDBbind: -logKd/Ki=8.42, IC50=3.8nM
    BindingDB: IC50=8.7nM
    13371 4hbv:A (1.63) BS01 15E ? N/A O60885 23095041 MOAD: ic50=23uM
    PDBbind: -logKd/Ki=4.64, IC50=23uM
    BindingDB: IC50=23000nM
    13372 4hbw:A (1.69) BS01 14Z ? N/A O60885 23095041 MOAD: ic50=4.8uM
    PDBbind: -logKd/Ki=5.32, IC50=4.8uM
    BindingDB: IC50=1900nM
    13373 4hbx:A (1.62) BS01 14X ? N/A O60885 23095041 MOAD: ic50=1.9uM
    PDBbind: -logKd/Ki=5.72, IC50=1.9uM
    BindingDB: IC50=4800nM
    13374 4hby:A (1.59) BS01 13F ? N/A O60885 23095041 MOAD: ic50=4.4uM
    PDBbind: -logKd/Ki=5.36, IC50=4.4uM
    BindingDB: IC50=4400nM
    13375 4hco:A (2.75) BS01 IMW 2.7.11.21 N/A P53350 23135290 PDBbind: -logKd/Ki=4.32, IC50=47.38uM
    BindingDB: IC50=2180nM
    13376 4hct:A (1.48) BS01 18R 2.7.10.2 GO:0004672 ... Q08881 23098091 PDBbind: -logKd/Ki=7.14, IC50=0.073uM
    BindingDB: IC50=10nM
    13377 4hcu:A (1.43) BS01 13L 2.7.10.2 GO:0004672 ... Q08881 23098091 PDBbind: -logKd/Ki=8.00, IC50=0.01uM
    13378 4hcv:A (1.48) BS01 13J 2.7.10.2 GO:0004672 ... Q08881 23098091 PDBbind: -logKd/Ki=6.40, IC50=0.40uM
    13379 4hdb:A (1.49) BS01 G52 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 23298236 MOAD: Ki=8.9nM
    PDBbind: -logKd/Ki=8.05, Ki=8.9nM
    13380 4hdb:B (1.49) BS01 G52 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 23298236 PDBbind: -logKd/Ki=8.05, Ki=8.9nM
    13381 4hdc:A (2.05) BS01 13Y 2.7.4.9 GO:0004798 ... P65249 23043329 MOAD: ic50=1.2nM
    PDBbind: -logKd/Ki=8.92, IC50=1.2nM
    13382 4hdf:A (1.29) BS01 G52 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 23298236 MOAD: Ki=3.2nM
    PDBbind: -logKd/Ki=8.49, Ki=3.2nM
    13383 4hdf:B (1.29) BS01 G52 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 23298236 PDBbind: -logKd/Ki=8.49, Ki=3.2nM
    13384 4hdp:A (1.22) BS01 G52 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 23298236 PDBbind: -logKd/Ki=7.51, Ki=30.9nM
    13385 4hdp:B (1.22) BS01 G52 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 23298236 MOAD: Ki=30.9nM
    PDBbind: -logKd/Ki=7.51, Ki=30.9nM
    13386 4hdu:A (2.848) BS01 dna ? GO:0003677 ... Q9UTN9 23112169 PDBbind: Kd=9.3nM
    13387 4hdu:A (2.848) BS02 dna ? GO:0003677 ... Q9UTN9 23112169 PDBbind: Kd=9.3nM
    13388 4hdv:A (2.702) BS01 dna ? GO:0003677 ... Q9UTN9 23112169 PDBbind: Kd=4.9nM
    13389 4hdv:A (2.702) BS02 dna ? GO:0003677 ... Q9UTN9 23112169 PDBbind: Kd=4.9nM
    13390 4he9:A (1.06) BS01 G52 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 23298236 MOAD: Ki=3.5nM
    PDBbind: -logKd/Ki=8.46, Ki=3.5nM
    13391 4he9:B (1.06) BS01 G52 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 23298236 PDBbind: -logKd/Ki=8.46, Ki=3.5nM
    13392 4heg:A (1.46) BS01 G52 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 23298236 MOAD: Ki=1.2nM
    PDBbind: -logKd/Ki=8.92, Ki=1.20nM
    13393 4heg:B (1.46) BS01 G52 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 23298236 PDBbind: -logKd/Ki=8.92, Ki=1.20nM
    13394 4hej:A (2.0) BS01 14D 2.7.4.9 GO:0004798 ... P65249 23043329 MOAD: ic50=24000nM
    PDBbind: -logKd/Ki=4.62, IC50=24000nM
    13395 4heu:A (2.0) BS02 15J 3.1.4.17 GO:0004114 ... Q9Y233 23149228 MOAD: ic50=0.097nM
    PDBbind: -logKd/Ki=10.01, IC50=0.097nM
    BindingDB: IC50=0.097nM
    13396 4hev:A (2.5) BS02 AXM 3.4.24.69 GO:0004222 ... P0DPI1 23340139 MOAD: Ki=460nM
    PDBbind: -logKd/Ki=6.34, Ki=0.46uM
    13397 4hf1:A (2.222) BS01 dna ? GO:0003677 ... P0AGK8 23644595 PDBbind: Kd=17nM
    13398 4hf1:A (2.222) BS02 dna ? GO:0003677 ... P0AGK8 23644595 PDBbind: Kd=17nM
    13399 4hf1:B (2.222) BS01 dna ? GO:0003677 ... P0AGK8 23644595 PDBbind: Kd=17nM
    13400 4hf1:B (2.222) BS02 dna ? GO:0003677 ... P0AGK8 23644595 PDBbind: Kd=17nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218