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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    12601 4de7:A (3.0) BS01 UDP 2.4.1.266 GO:0000287 ... P9WMW9 22637481 PDBbind: -logKd/Ki=4.80, Kd=16uM
    12602 4dea:A (2.45) BS01 NHI 2.7.11.1 GO:0000212 ... O14965 22803810 MOAD: ic50=256nM
    PDBbind: -logKd/Ki=6.59, IC50=256nM
    BindingDB: IC50=256nM
    12603 4deb:A (3.05) BS01 NHJ 2.7.11.1 GO:0000212 ... O14965 22803810 PDBbind: -logKd/Ki=6.43, IC50=371nM
    BindingDB: IC50=226.0nM
    12604 4ded:A (3.05) BS01 NHU 2.7.11.1 GO:0000212 ... O14965 22803810 PDBbind: -logKd/Ki=7.42, IC50=38.2nM
    BindingDB: IC50=38.2nM
    12605 4deg:A (2.0) BS01 0JJ 2.7.10.1 GO:0004672 ... P08581 22595176 MOAD: ic50=6nM
    PDBbind: -logKd/Ki=8.22, IC50=6nM
    BindingDB: IC50=3nM, Ki=3.2nM
    12606 4deh:A (2.0) BS01 0JK 2.7.10.1 GO:0004672 ... P08581 22595176 MOAD: ic50=612nM
    PDBbind: -logKd/Ki=6.21, IC50=612nM
    BindingDB: IC50=612nM
    12607 4dei:A (2.05) BS01 0JL 2.7.10.1 GO:0004672 ... P08581 22595176 MOAD: ic50=1nM
    PDBbind: -logKd/Ki=9.00, IC50=1nM
    BindingDB: IC50=2nM
    12608 4del:A (1.58) BS03 PGH 4.1.2.13 GO:0004332 ... P9WQA3 23298222 MOAD: Kd=21.1nM
    PDBbind: -logKd/Ki=7.68, Kd=21.1nM
    12609 4dem:F (1.85) BS01 YS4 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 22390415 MOAD: ic50=28nM
    PDBbind: -logKd/Ki=7.55, IC50=28nM
    BindingDB: IC50=28nM
    12610 4der:A (1.9) BS01 AGI ? GO:0005179 ... P02766 22842046 MOAD: Kd=0.49uM
    PDBbind: -logKd/Ki=6.31, Kd=0.49uM
    BindingDB: IC50=653nM, Kd=250nM
    12611 4der:B (1.9) BS01 AGI ? GO:0005179 ... P02766 22842046 MOAD: Kd=0.49uM
    PDBbind: -logKd/Ki=6.31, Kd=0.49uM
    BindingDB: IC50=653nM, Kd=250nM
    12612 4des:A (1.75) BS01 57D ? GO:0005179 ... P02766 22842046 MOAD: Kd=1.4uM
    PDBbind: -logKd/Ki=5.85, Kd=1.40uM
    12613 4des:B (1.75) BS01 57D ? GO:0005179 ... P02766 22842046 MOAD: Kd=1.4uM
    PDBbind: -logKd/Ki=5.85, Kd=1.40uM
    12614 4det:B (2.05) BS01 KMP ? GO:0005179 ... P02766 22842046 MOAD: Kd=2.1uM
    PDBbind: -logKd/Ki=5.68, Kd=2.10uM
    12615 4deu:A (1.599) BS01 NAR ? GO:0005179 ... P02766 22842046 MOAD: Kd=2.29uM
    PDBbind: -logKd/Ki=5.64, Kd=2.29uM
    12616 4deu:B (1.599) BS01 NAR ? GO:0005179 ... P02766 22842046 MOAD: Kd=2.29uM
    PDBbind: -logKd/Ki=5.64, Kd=2.29uM
    12617 4dew:A (1.899) BS01 LU2 ? N/A P02766 22842046 MOAD: Kd=0.1uM
    PDBbind: -logKd/Ki=7.00, Kd=0.10uM
    BindingDB: IC50=7000nM, Kd=70nM
    12618 4dew:B (1.899) BS01 LU2 ? N/A P02766 22842046 MOAD: Kd=0.1uM
    PDBbind: -logKd/Ki=7.00, Kd=0.10uM
    BindingDB: IC50=7000nM, Kd=70nM
    12619 4dfb:A (1.95) BS01 KAN ? GO:0000166 ... O68183 22195561 PDBbind: -logKd/Ki=4.60, Ki=25uM
    12620 4dff:B (2.11) BS01 0JP 3.1.4.17 GO:0004114 ... Q9Y233 22377514 MOAD: Ki=35nM
    PDBbind: -logKd/Ki=7.46, Ki=35nM
    BindingDB: Ki=35nM
    12621 4dfg:A (1.23) BS01 0JV 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 22364812 PDBbind: -logKd/Ki=11.74, Ki=1.8pM
    12622 4dfg:B (1.23) BS01 0JV 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 22364812 MOAD: Ki=1.8pM
    PDBbind: -logKd/Ki=11.74, Ki=1.8pM
    12623 4dfl:A (1.98) BS01 0K0 2.7.10.2 GO:0004672 ... P43405 22425453 MOAD: ic50=0.67uM
    PDBbind: -logKd/Ki=6.17, IC50=0.67uM
    12624 4dfn:A (2.48) BS01 0K1 2.7.10.2 GO:0004672 ... P43405 22425453 MOAD: ic50=0.02uM
    PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    BindingDB: IC50=20nM
    12625 4dfu:A (1.98) BS02 QUE ? GO:0000166 ... O68183 22195561 MOAD: Ki=25.1uM
    PDBbind: -logKd/Ki=4.60, Ki=25.1uM
    12626 4dfu:A (1.98) BS03 QUE ? GO:0000166 ... O68183 22195561 MOAD: Ki=25.1uM
    PDBbind: -logKd/Ki=4.60, Ki=25.1uM
    12627 4dgg:A (2.65) BS01 I76 2.7.10.2 GO:0004672 ... P00523 23143416 PDBbind: -logKd/Ki=6.10, IC50=800nM
    12628 4dgm:A (1.65) BS01 AGI 2.7.11.1 GO:0004672 ... P28523 22794353 MOAD: ic50=1.2uM
    PDBbind: -logKd/Ki=5.92, IC50=1.2uM
    12629 4dgn:A (1.75) BS01 LU2 2.7.11.1 GO:0004672 ... P28523 22794353 MOAD: ic50=0.35uM
    PDBbind: -logKd/Ki=6.46, IC50=0.35uM
    12630 4dgr:A (1.551) BS04 3LV 3.2.1.18 GO:0004308 ... P03472 22559154 MOAD: ic50=9.1uM
    PDBbind: -logKd/Ki=5.04, IC50=9.1uM
    12631 4dh6:A (2.5) BS01 0KN 3.4.23.46 GO:0004190 ... P56817 22468639 MOAD: ic50=16.8nM
    PDBbind: -logKd/Ki=7.77, IC50=16.8nM
    BindingDB: IC50=26nM
    12632 4dhf:A (2.8) BS01 0K6 2.7.11.1 GO:0000212 ... O14965 22607669 PDBbind: -logKd/Ki=7.55, IC50=28nM
    BindingDB: IC50=28nM
    12633 4dhl:A (2.3) BS03 0K7 3.1.3.2 GO:0003993 ... P80366 22943065 MOAD: Ki=33uM
    PDBbind: -logKd/Ki=4.48, Ki=33uM
    12634 4dhl:D (2.3) BS03 0K7 3.1.3.2 GO:0003993 ... P80366 22943065 MOAD: Ki=33uM
    PDBbind: -logKd/Ki=4.48, Ki=33uM
    12635 4dhm:A (1.7) BS02 0KB ? GO:0000122 ... P31947 23939230 PDBbind: -logKd/Ki=3.78, IC50=165uM
    12636 4dhn:A (1.8) BS02 0KC ? GO:0000122 ... P31947 23939230 PDBbind: -logKd/Ki=3.89, IC50=128uM
    12637 4dho:A (1.7) BS02 Y09 ? GO:0000122 ... P31947 23939230 PDBbind: -logKd/Ki=3.93, IC50=118uM
    12638 4dhp:A (1.75) BS02 Y07 ? GO:0000122 ... P31947 23939230 PDBbind: -logKd/Ki=4.44, IC50=36uM
    12639 4dhq:A (1.75) BS02 Y06 ? GO:0000122 ... P31947 23939230 PDBbind: -logKd/Ki=4.49, IC50=32uM
    12640 4dhr:A (1.4) BS02 Y04 ? GO:0000122 ... P31947 23939230 PDBbind: -logKd/Ki=4.57, IC50=27uM
    12641 4dhs:A (1.74) BS02 Y03 ? GO:0000122 ... P31947 23939230 PDBbind: -logKd/Ki=4.80, IC50=16uM
    12642 4dht:A (1.8) BS02 0KG ? GO:0000122 ... P31947 23939230 PDBbind: -logKd/Ki=4.82, IC50=15uM
    12643 4dhu:A (1.67) BS02 0KH ? GO:0000122 ... P31947 23939230 PDBbind: -logKd/Ki=5.30, IC50=5uM
    BindingDB: IC50=5000nM
    12644 4di2:A (2.0) BS01 0K9 3.4.23.46 GO:0004190 ... P56817 22468684 MOAD: ic50=5.5nM
    PDBbind: -logKd/Ki=8.26, IC50=5.5nM
    12645 4dij:A (1.9) BS01 BLF 2.3.2.27 GO:0005634 ... Q00987 22507962 MOAD: ic50=0.03uM
    PDBbind: -logKd/Ki=7.52, IC50=0.03uM
    12646 4dij:A (1.9) BS02 BLF 2.3.2.27 GO:0005634 ... Q00987 22507962 MOAD: ic50=0.03uM
    PDBbind: -logKd/Ki=7.52, IC50=0.03uM
    12647 4dj7:A (2.81) BS01 GAL ? GO:0019031 ... Q6VMK1 22674977 PDBbind: -logKd/Ki=6.30, Kd=0.5uM
    12648 4dj7:A (2.81) BS02 SIA ? GO:0019031 ... Q6VMK1 22674977 PDBbind: -logKd/Ki=6.30, Kd=0.5uM
    12649 4djh:A (2.9) BS01 JDC ?
    3.2.1.17    		 GO:0003796 ... P00720
    P41145    		 22437504 PDBbind: -logKd/Ki=9.49, Ki=0.32nM
    12650 4djo:A (1.78) BS01 MK5 3.1.26.13 GO:0004190 ... Q90K99 22708897 MOAD: Ki=0.003nM
    PDBbind: -logKd/Ki=11.52, Ki=3pM
    12651 4djo:B (1.78) BS01 MK5 3.1.26.13 GO:0004190 ... Q90K99 22708897 PDBbind: -logKd/Ki=11.52, Ki=3pM
    12652 4djp:A (1.4) BS01 M73 3.1.26.13 GO:0004190 ... Q90K99 22708897 MOAD: Ki=0.028nM
    PDBbind: -logKd/Ki=10.55, Ki=0.028nM
    12653 4djp:B (1.4) BS01 M73 3.1.26.13 GO:0004190 ... Q90K99 22708897 PDBbind: -logKd/Ki=10.55, Ki=0.028nM
    12654 4djq:A (1.4) BS01 M86 3.1.26.13 GO:0004190 ... Q90K99 22708897 MOAD: Ki=0.048nM
    PDBbind: -logKd/Ki=10.32, Ki=0.048nM
    12655 4djq:B (1.4) BS01 M86 3.1.26.13 GO:0004190 ... Q90K99 22708897 PDBbind: -logKd/Ki=10.32, Ki=0.048nM
    12656 4djr:A (1.55) BS01 0KJ 3.1.26.13 GO:0004190 ... Q90K99 22708897 MOAD: Ki=0.003nM
    PDBbind: -logKd/Ki=11.52, Ki=0.003nM
    12657 4djr:B (1.55) BS01 0KJ 3.1.26.13 GO:0004190 ... Q90K99 22708897 PDBbind: -logKd/Ki=11.52, Ki=0.003nM
    12658 4dju:A (1.8) BS01 0KK 3.4.23.46 GO:0004190 ... P56817 22390835 MOAD: Ki=3.6uM
    PDBbind: -logKd/Ki=5.44, Ki=3.6uM
    12659 4djv:A (1.73) BS01 0KM 3.4.23.46 GO:0004190 ... P56817 22390835 MOAD: Ki=0.19uM
    PDBbind: -logKd/Ki=6.72, Ki=0.19uM
    BindingDB: IC50=392nM
    12660 4djw:A (1.9) BS01 0KP 3.4.23.46 GO:0004190 ... P56817 22390835 MOAD: Ki=0.53uM
    PDBbind: -logKd/Ki=6.28, Ki=0.53uM
    BindingDB: IC50=1680nM
    12661 4djx:A (1.5) BS01 0KQ 3.4.23.46 GO:0004190 ... P56817 22390835 MOAD: Ki=59nM
    PDBbind: -logKd/Ki=7.23, Ki=59nM
    12662 4djy:A (1.86) BS01 0KR 3.4.23.46 GO:0004190 ... P56817 22390835 MOAD: Ki=5.4nM
    PDBbind: -logKd/Ki=8.27, Ki=5.4nM
    12663 4dk5:A (2.95) BS01 0KO 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 22548365 PDBbind: -logKd/Ki=8.40, Ki=4nM
    BindingDB: Ki=8nM
    12664 4dk7:A (2.45) BS02 0KS ? GO:0003677 ... P55055 22406115 MOAD: ic50=0.02uM
    PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    12665 4dk8:A (2.75) BS02 0KT ? GO:0003677 ... P55055 22406115 PDBbind: -logKd/Ki=5.74, IC50=1.8uM
    12666 4dko:A (1.981) BS01 0LM ? GO:0019031 ... Q0ED31 22497421 MOAD: Kd=0.3uM
    PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    12667 4dkp:A (1.7978) BS01 0LL ? GO:0019031 ... Q0ED31 22497421 MOAD: Kd=1.9uM
    PDBbind: -logKd/Ki=5.72, Kd=1.9uM
    12668 4dkq:A (1.888) BS01 0LK ? GO:0019031 ... Q0ED31 22497421 MOAD: Kd=0.25uM
    PDBbind: -logKd/Ki=6.60, Kd=0.25uM
    12669 4dkr:A (1.8) BS01 0LJ ? GO:0019031 ... Q0ED31 22497421 MOAD: Kd=0.3uM
    PDBbind: -logKd/Ki=6.52, Kd=0.30uM
    12670 4dld:A (2.0) BS01 TZG ? GO:0015276 ... P22756 22407805 MOAD: Ki=1.5uM
    PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    BindingDB: Ki=3000nM
    12671 4dli:A (1.91) BS01 IRG 2.7.11.24 GO:0000077 ... Q16539 22768308 MOAD: Kd=2.4uM
    PDBbind: -logKd/Ki=5.62, Kd=2.40uM
    12672 4dli:A (1.91) BS02 IRG 2.7.11.24 GO:0000077 ... Q16539 22768308 MOAD: Kd=2.4uM
    PDBbind: -logKd/Ki=5.62, Kd=2.40uM
    12673 4dlj:A (2.6) BS01 6RG 2.7.11.24 GO:0000077 ... Q16539 22768308 PDBbind: -logKd/Ki=5.92, Kd=1.20uM
    12674 4dlj:A (2.6) BS02 6RG 2.7.11.24 GO:0000077 ... Q16539 22768308 PDBbind: -logKd/Ki=5.92, Kd=1.20uM
    12675 4dmn:A (2.45) BS01 0L9 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 22437836 MOAD: ic50=2.3uM
    PDBbind: -logKd/Ki=5.64, IC50=2.3uM
    BindingDB: IC50=4e+2nM
    12676 4dmw:A (2.5) BS02 UDP 2.4.1.-
    3.4.22.-    		 GO:0016757 ... P16154 22747490 PDBbind: -logKd/Ki=4.94, Kd=11.4uM
    12677 4dmy:A (1.63) BS01 0LC 3.4.22.38 GO:0006508 ... P43235 22742641 PDBbind: -logKd/Ki=9.00, IC50<0.001uM
    12678 4dn0:A (2.3) BS01 C2E ? N/A A0A0H2ZD98 22605337 Manual survey: Kd=1.9uM (22605337)
    MOAD: Kd=1.9uM
    PDBbind: -logKd/Ki=5.72, Kd=1.9uM
    12679 4dn0:A (2.3) BS02 C2E ? N/A A0A0H2ZD98 22605337 Manual survey: Kd=1.9uM (22605337)
    MOAD: Kd=1.9uM
    PDBbind: -logKd/Ki=5.72, Kd=1.9uM
    12680 4do3:A (2.25) BS02 0LA 3.1.1.-
    3.5.1.99    		 GO:0000139 ... P97612 23240907 MOAD: ic50=74uM
    PDBbind: -logKd/Ki=4.10, IC50=79uM
    BindingDB: IC50=32000nM
    12681 4do4:A (1.4) BS01 DJN 3.2.1.49 GO:0004553 ... P17050 23045655 PDBbind: -logKd/Ki=7.29, Ki=51nM
    12682 4do5:A (1.51) BS01 DGJ 3.2.1.49 GO:0004553 ... P17050 23045655 PDBbind: -logKd/Ki=5.83, Ki=1.48uM
    12683 4dpf:A (1.8) BS01 0LG 3.4.23.46 GO:0004190 ... P56817 22698785 MOAD: ic50=400nM
    PDBbind: -logKd/Ki=6.40, IC50=400nM
    12684 4dpi:A (1.9) BS01 0N1 3.4.23.46 GO:0004190 ... P56817 22698785 MOAD: ic50=78nM
    PDBbind: -logKd/Ki=7.11, IC50=78nM
    12685 4dpt:B (2.191) BS01 FM0 4.1.1.33 GO:0004163 ... Q9FD73 22734632 PDBbind: -logKd/Ki=7.30, Ki=50nM
    12686 4dpu:A (1.9) BS01 FM0 4.1.1.33 GO:0004163 ... Q9FD73 22734632 PDBbind: -logKd/Ki=7.30, Ki=50nM
    12687 4dpy:A (2.14) BS01 2P0 4.1.1.33 GO:0004163 ... Q9FD73 22734632 PDBbind: -logKd/Ki=5.37, Ki=4.3uM
    12688 4dq2:A (2.5) BS01 BTX N/A GO:0004077 ... N/A 22437830 MOAD: Ki=0.03uM
    PDBbind: -logKd/Ki=7.52, Ki=0.03uM
    12689 4dr9:A (1.9) BS02 BB2 3.5.1.88 GO:0006412 ... A0A0H3JZJ4 23407310 MOAD: ic50=10nM
    PDBbind: -logKd/Ki=8.00, IC50=10nM
    12690 4drk:A (1.5) BS01 I63 5.2.1.8 GO:0003755 ... Q13451 22455444 MOAD: ic50=8.36uM
    PDBbind: -logKd/Ki=5.08, IC50=8.36uM
    BindingDB: Ki=2700nM, IC50=8360nM
    12691 4drm:A (1.48) BS01 0MC 5.2.1.8 GO:0003755 ... Q13451 22455444 MOAD: ic50=5.8uM
    PDBbind: -logKd/Ki=5.24, IC50=5.8uM
    BindingDB: IC50=5800nM
    12692 4drn:A (1.069) BS01 0MC 5.2.1.8 GO:0003755 ... Q13451 22455444 MOAD: ic50=5.8uM
    PDBbind: -logKd/Ki=5.24, IC50=5.8uM
    BindingDB: IC50=5800nM
    12693 4dro:A (1.1) BS01 0MD 5.2.1.8 GO:0003755 ... Q13451 22455444 MOAD: ic50=3.9uM
    PDBbind: -logKd/Ki=5.41, IC50=3.9uM
    BindingDB: IC50=3900nM
    12694 4drp:A (1.8) BS01 0MD 5.2.1.8 GO:0003755 ... Q13451 22455444 MOAD: ic50=3.9uM
    PDBbind: -logKd/Ki=5.41, IC50=3.9uM
    BindingDB: IC50=3900nM
    12695 4dru:A (2.1) BS01 0LN 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 22473861 MOAD: Kd=2.4nM
    PDBbind: -logKd/Ki=8.62, Kd=2.4nM
    12696 4dst:A (2.3) BS01 9LI 3.6.5.2 GO:0000139 ... P01116 22431598 PDBbind: -logKd/Ki=2.96, Kd=1.1mM
    BindingDB: IC50=155000nM
    12697 4dsu:A (1.7) BS02 BZI 3.6.5.2 GO:0000139 ... P01116 22431598 PDBbind: -logKd/Ki=2.82, Kd=1.5mM
    12698 4dsy:A (2.3) BS03 0LO 3.1.3.2 GO:0003993 ... P80366 22943065 MOAD: Ki=37uM
    PDBbind: -logKd/Ki=4.43, Ki=37uM
    12699 4dt2:A (2.7) BS03 0LV 3.1.3.2 GO:0003993 ... P80366 22943065 PDBbind: -logKd/Ki=4.37, Ki=43uM
    12700 4dt2:D (2.7) BS03 0LV 3.1.3.2 GO:0003993 ... P80366 22943065 PDBbind: -logKd/Ki=4.37, Ki=43uM
    12701 4dt6:A (2.6) BS01 6LI ? GO:0000082 ... P06730 22458568 PDBbind: -logKd/Ki=7.23, IC50=59nM
    12702 4dtk:A (1.86) BS01 7LI 2.7.11.1 GO:0004672 ... P11309 22727640 MOAD: ic50<0.004uM
    PDBbind: -logKd/Ki=8.52, IC50<0.003uM
    12703 4dtm:A (1.95) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22630605 PDBbind: Kd=590uM
    12704 4dtm:A (1.95) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22630605 PDBbind: Kd=590uM
    12705 4dtn:A (1.96) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22630605 PDBbind: Kd=1100uM
    12706 4dtn:A (1.96) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22630605 PDBbind: Kd=1100uM
    12707 4dtr:A (2.04) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22630605 PDBbind: Kd=250uM
    12708 4dtr:A (2.04) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22630605 PDBbind: Kd=250uM
    12709 4dts:A (1.96) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22630605 PDBbind: Kd=1900uM
    12710 4dts:A (1.96) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22630605 PDBbind: Kd=1900uM
    12711 4dtt:A (3.22) BS02 I41 3.4.24.56 GO:0001618 ... P14735 24735644 PDBbind: -logKd/Ki=5.54, IC50=2.9uM
    12712 4dtt:A (3.22) BS03 I41 3.4.24.56 GO:0001618 ... P14735 24735644 PDBbind: -logKd/Ki=5.54, IC50=2.9uM
    12713 4dtu:A (1.86) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22630605 PDBbind: Kd=170uM
    12714 4dtu:A (1.86) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22630605 PDBbind: Kd=170uM
    12715 4dtx:A (1.84) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22630605 PDBbind: Kd=830uM
    12716 4dtx:A (1.84) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22630605 PDBbind: Kd=830uM
    12717 4du1:A (2.15) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22571765 PDBbind: Kd=36uM
    12718 4du1:A (2.15) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22571765 PDBbind: Kd=36uM
    12719 4du3:A (2.02) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22571765 PDBbind: Kd=665uM
    12720 4du3:A (2.02) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22571765 PDBbind: Kd=665uM
    12721 4du4:A (2.28) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22571765 PDBbind: Kd=38uM
    12722 4du4:A (2.28) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22571765 PDBbind: Kd=38uM
    12723 4du8:A (2.1) BS01 2P0 4.1.1.33 GO:0004163 ... Q9FD73 22734632 PDBbind: -logKd/Ki=5.37, Ki=4.3uM
    12724 4duh:A (1.5) BS01 RLI 5.6.2.2 GO:0003677 ... P0AES6 22731783 MOAD: Kd=6.6uM
    PDBbind: -logKd/Ki=5.18, Kd=6.6uM
    12725 4dum:A (2.95) BS01 HLI ? GO:0000082 ... P06730 22458568 PDBbind: -logKd/Ki=7.02, IC50=95nM
    BindingDB: IC50=95nM
    12726 4dus:A (2.5) BS01 0MP 3.4.23.46 GO:0004190 ... P56817 24900403 PDBbind: -logKd/Ki=8.30, IC50=5.0nM
    12727 4dv8:A (1.632) BS02 0LX 3.4.24.83 GO:0008237 ... P15917 22342144 MOAD: Ki=0.58nM
    PDBbind: -logKd/Ki=9.24, Ki=0.58nM
    BindingDB: Ki=0.58nM
    12728 4dve:A (2.09) BS01 BTN ? GO:0005886 ... A2RMJ9 22891302 MOAD: Kd=0.3nM
    PDBbind: -logKd/Ki=9.52, Kd=0.3nM
    12729 4dvi:A (1.9) BS02 2IW 2.4.2.-
    2.4.2.30    		 GO:0003950 ... O95271 22438990 PDBbind: -logKd/Ki=6.72, IC50=0.192uM
    12730 4dwb:A (2.1) BS04 0M7 2.5.1.10 GO:0004161 ... Q95WL3 22715997 MOAD: ic50=1840nM
    PDBbind: -logKd/Ki=5.74, IC50=1840nM
    12731 4dwg:A (2.01) BS03 0M8 2.5.1.10 GO:0004161 ... Q95WL3 22715997 MOAD: ic50=58nM
    PDBbind: -logKd/Ki=7.24, IC50=58.0nM
    12732 4dwk:A (3.0) BS01 MGK 3.4.24.56 GO:0001618 ... P14735 24735644 PDBbind: -logKd/Ki=6.22, IC50=0.6uM
    12733 4dxg:A (2.5) BS01 GAL ? GO:0005576 ... A0A0H3K6A3 22949551 PDBbind: -logKd/Ki=7.06, Kd=87.0nM
    12734 4dxg:A (2.5) BS02 SIA ? GO:0005576 ... A0A0H3K6A3 22949551 PDBbind: -logKd/Ki=7.06, Kd=87.0nM
    12735 4dxg:A (2.5) BS03 FUC ? GO:0005576 ... A0A0H3K6A3 22949551 PDBbind: -logKd/Ki=7.06, Kd=87.0nM
    12736 4dxj:A (2.35) BS03 0M9 2.5.1.10 GO:0004161 ... Q95WL3 22715997 MOAD: ic50=38nM
    PDBbind: -logKd/Ki=7.42, IC50=38.0nM
    12737 4dxj:B (2.35) BS03 0M9 2.5.1.10 GO:0004161 ... Q95WL3 22715997 MOAD: ic50=38nM
    PDBbind: -logKd/Ki=7.42, IC50=38.0nM
    12738 4dy6:A (2.2) BS01 A22 2.7.1.23 GO:0003951 ... Q8Y8D7 17686780 PDBbind: -logKd/Ki=4.40, Kd=0.04mM
    12739 4dzw:A (3.05) BS01 0MQ 2.5.1.10 GO:0004161 ... Q95WL3 22715997 PDBbind: -logKd/Ki=7.89, IC50=13nM
    12740 4dzy:A (2.101) BS02 WJ1 2.7.11.1
    2.7.11.4    		 GO:0004672 ... Q00972 23716694 PDBbind: -logKd/Ki=5.62, Kd=2.4uM
    12741 4e0w:A (2.3501) BS01 KAI ? GO:0015276 ... P42264 22425692 PDBbind: -logKd/Ki=7.48, Ki=33nM
    BindingDB: Ki=32.8nM
    12742 4e0x:A (2.0) BS01 KAI ? GO:0015276 ... P22756 22425692 PDBbind: -logKd/Ki=7.12, Ki=76nM
    BindingDB: IC50=77nM, Ki=75.9nM, EC50=37000nM
    12743 4e1e:A (2.65) BS03 0MW 2.5.1.10 GO:0004161 ... Q95WL3 22715997 PDBbind: -logKd/Ki=6.31, IC50=490nM
    12744 4e1k:A (2.0) BS01 0N5 2.3.1.157
    2.7.7.23    		 GO:0000287 ... P43889 22721802 MOAD: Kd=0.5uM
    PDBbind: -logKd/Ki=6.30, Kd=0.5uM
    12745 4e1m:A (1.9) BS01 TQ2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 22535962 MOAD: ic50=215nM
    PDBbind: -logKd/Ki=7.26, IC50=55nM
    12746 4e1n:A (2.0) BS01 TQX 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 22535962 MOAD: ic50=19nM
    PDBbind: -logKd/Ki=7.17, IC50=67nM
    12747 4e1z:A (2.5) BS01 0MX 2.7.10.2 GO:0004672 ... Q9R117 22995073 PDBbind: -logKd/Ki=8.52, IC50<3nM
    12748 4e20:A (2.6) BS01 0MY 2.7.10.2 GO:0004672 ... Q9R117 22995073 PDBbind: -logKd/Ki=8.22, IC50=6nM
    12749 4e26:A (2.55) BS01 734 2.7.11.1 GO:0004672 ... P15056 22537109 PDBbind: -logKd/Ki=6.40, IC50=0.4uM
    BindingDB: IC50=800nM
    12750 4e3d:A (1.6) BS02 GTQ 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22531842 MOAD: ic50=5mM
    PDBbind: -logKd/Ki=2.30, IC50=5mM
    BindingDB: IC50=5000000nM, Ki=4100nM
    12751 4e3d:A (1.6) BS03 GTQ 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22531842 MOAD: ic50=5mM
    PDBbind: -logKd/Ki=2.30, IC50=5mM
    BindingDB: IC50=5000000nM, Ki=4100nM
    12752 4e3f:A (1.5) BS02 GRE 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22531842 MOAD: ic50=3mM
    PDBbind: -logKd/Ki=2.52, IC50=3mM
    BindingDB: Ki=5200nM
    12753 4e3f:A (1.5) BS03 GRE 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22531842 MOAD: ic50=3mM
    PDBbind: -logKd/Ki=2.52, IC50=3mM
    BindingDB: Ki=5200nM
    12754 4e3f:A (1.5) BS04 GRE 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22531842 MOAD: ic50=3mM
    PDBbind: -logKd/Ki=2.52, IC50=3mM
    BindingDB: Ki=5200nM
    12755 4e3h:A (1.5) BS02 HQE 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22531842 MOAD: Ki=90nM
    PDBbind: -logKd/Ki=7.05, Ki=90nM
    BindingDB: Ki=90nM
    12756 4e3i:A (1.6) BS01 0N3 3.5.2.6 GO:0008800 ... P00811 23043117 PDBbind: -logKd/Ki=8.89, Ki=1.3nM
    12757 4e3j:A (1.7999) BS01 0N4 3.5.2.6 GO:0008800 ... P00811 23043117 PDBbind: -logKd/Ki=8.92, Ki=1.2nM
    12758 4e3k:A (1.4299) BS01 0NA 3.5.2.6 GO:0008800 ... P00811 23043117 PDBbind: -logKd/Ki=9.10, Ki=0.8nM
    12759 4e3l:A (1.43) BS01 0NB 3.5.2.6 GO:0008800 ... P00811 23043117 PDBbind: -logKd/Ki=8.52, Ki=3.0nM
    12760 4e3l:A (1.43) BS02 0NB 3.5.2.6 GO:0008800 ... P00811 23043117 PDBbind: -logKd/Ki=8.52, Ki=3.0nM
    12761 4e3m:A (1.44) BS01 0ND 3.5.2.6 GO:0008800 ... P00811 23043117 PDBbind: -logKd/Ki=9.70, Ki=0.2nM
    12762 4e3m:A (1.44) BS02 0ND 3.5.2.6 GO:0008800 ... P00811 23043117 PDBbind: -logKd/Ki=9.70, Ki=0.2nM
    12763 4e3n:A (1.49) BS01 0NE 3.5.2.6 GO:0008800 ... P00811 23043117 PDBbind: -logKd/Ki=10.30, Ki=0.05nM
    BindingDB: Ki=50nM
    12764 4e3o:A (1.6) BS01 0NG 3.5.2.6 GO:0008800 ... P00811 23043117 PDBbind: -logKd/Ki=6.51, Ki=310nM
    12765 4e49:A (1.45) BS02 RCO 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22531842 MOAD: Ki=7.7uM
    PDBbind: -logKd/Ki=5.11, Ki=7.7uM
    BindingDB: Ki=7700nM
    12766 4e49:A (1.45) BS03 RCO 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22531842 MOAD: Ki=7.7uM
    PDBbind: -logKd/Ki=5.11, Ki=7.7uM
    BindingDB: Ki=7700nM
    12767 4e49:A (1.45) BS04 RCO 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22531842 MOAD: Ki=7.7uM
    PDBbind: -logKd/Ki=5.11, Ki=7.7uM
    BindingDB: Ki=7700nM
    12768 4e4a:A (1.45) BS02 JKE 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22531842 MOAD: ic50=9mM
    PDBbind: -logKd/Ki=2.05, IC50=9mM
    12769 4e4l:A (2.0) BS01 0NH 2.7.10.2 GO:0004672 ... P23458 22591402 MOAD: Ki=1.7nM
    PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    BindingDB: EC50=210nM, Ki=1.7nM
    12770 4e4n:A (1.9) BS01 0NL 2.7.10.2 GO:0004672 ... P23458 22591402 MOAD: Ki=0.9nM
    PDBbind: -logKd/Ki=9.05, Ki=0.9nM
    BindingDB: EC50=91nM, Ki=0.9nM
    12771 4e4x:A (3.6) BS01 T1Q 2.7.11.1 GO:0004672 ... P15056 22534450 PDBbind: -logKd/Ki=8.15, IC50=7nM
    BindingDB: IC50=41nM
    12772 4e5d:A (2.201) BS01 0NJ 1.13.12.7 GO:0001676 ... P08659 22921073 PDBbind: -logKd/Ki=6.22, IC50=0.6uM
    BindingDB: IC50=600nM
    12773 4e5f:A (2.392) BS03 0N7 3.1.-.- GO:0003723 ... Q5EP34 22876176 MOAD: ic50=15uM
    PDBbind: -logKd/Ki=4.82, IC50=15.0uM
    12774 4e5g:A (2.647) BS03 XI7 3.1.-.- GO:0003723 ... Q5EP34 22876176 PDBbind: -logKd/Ki=4.67, IC50=21.3uM
    12775 4e5g:A (2.647) BS04 XI7 3.1.-.- GO:0003723 ... Q5EP34 22876176 PDBbind: -logKd/Ki=4.67, IC50=21.3uM
    12776 4e5h:D (2.158) BS03 0N8 3.1.-.- GO:0003723 ... Q5EP34 22876176 MOAD: ic50=0.43uM
    PDBbind: -logKd/Ki=6.37, IC50=0.43uM
    12777 4e5j:A (2.35) BS01 581 3.1.-.- GO:0003723 ... Q5EP34 22876176 MOAD: Ki=18.7uM
    PDBbind: -logKd/Ki=4.73, Ki=18.7uM
    12778 4e5j:A (2.35) BS02 581 3.1.-.- GO:0003723 ... Q5EP34 22876176 MOAD: Ki=18.7uM
    PDBbind: -logKd/Ki=4.73, Ki=18.7uM
    12779 4e5w:A (1.86) BS01 0NT 2.7.10.2 GO:0004672 ... P23458 22591402 MOAD: Ki=22nM
    PDBbind: -logKd/Ki=7.66, Ki=22nM
    BindingDB: Ki=22nM, EC50=>8800nM
    12780 4e6c:A (2.39) BS01 0O8 2.7.11.24 GO:0000077 ... Q16539 23079240 MOAD: Kd~15uM
    PDBbind: -logKd/Ki=4.82, Kd=15uM
    12781 4e6d:A (2.22) BS01 0NU 2.7.10.2 GO:0004672 ... O60674 22591402 MOAD: Ki=1.2nM
    PDBbind: -logKd/Ki=8.92, Ki=1.2nM
    BindingDB: Ki=1.2nM
    12782 4e6q:A (1.948) BS01 0NV 2.7.10.2 GO:0004672 ... O60674 22591402 MOAD: Ki=4.4nM
    PDBbind: -logKd/Ki=8.36, Ki=4.4nM
    BindingDB: Ki=4.4nM
    12783 4e70:A (1.6093) BS01 N7I ? GO:0008168 ... A6XNE6 23633600 MOAD: Kd=2.94uM
    PDBbind: -logKd/Ki=5.28, Kd=5.26uM
    12784 4e70:B (1.6093) BS01 N7I ? GO:0008168 ... A6XNE6 23633600 MOAD: Kd=2.94uM
    PDBbind: -logKd/Ki=5.28, Kd=5.26uM
    12785 4e7r:H (2.25) BS03 0NW 3.4.21.5 GO:0004252 ... P00734 N/A PDBbind: -logKd/Ki=7.70, Ki=0.02uM
    12786 4e8w:A (2.8654) BS01 IHA ? GO:0003824 ... B4EB35 23256532 PDBbind: -logKd/Ki=6.09, IC50=0.81uM
    BindingDB: IC50=810nM
    12787 4e8y:A (2.6) BS01 IHA ? GO:0003824 ... B4EB35 23256532 PDBbind: -logKd/Ki=6.09, Kd=0.81uM
    BindingDB: IC50=810nM
    12788 4e8y:B (2.6) BS01 IHA ? GO:0003824 ... B4EB35 23256532 PDBbind: -logKd/Ki=6.09, Kd=0.81uM
    BindingDB: IC50=810nM
    12789 4e8z:A (3.05) BS01 IHC ? GO:0003824 ... B4EB35 23256532 PDBbind: -logKd/Ki=6.64, IC50=0.23uM
    BindingDB: IC50=230nM
    12790 4e90:A (2.5) BS02 7RG 3.1.4.35 GO:0004114 ... O76083 23025719 MOAD: ic50=8nM
    PDBbind: -logKd/Ki=8.10, IC50=8nM
    BindingDB: IC50=70.0nM
    12791 4e93:A (1.84) BS01 GUI 2.7.10.2 GO:0004672 ... P07332 22520759 MOAD: ic50=45.8nM
    PDBbind: -logKd/Ki=6.93, IC50=118nM
    12792 4e96:A (1.92) BS01 0NS ? N/A O60885 23095041 MOAD: ic50=0.22uM
    PDBbind: -logKd/Ki=6.66, IC50=0.22uM
    BindingDB: IC50=220nM, Kd=136nM
    12793 4e9u:A (2.1) BS01 RWY 2.5.1.96 GO:0003824 ... A9JQL9 22486710 MOAD: Ki=1.5uM
    PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    BindingDB: Ki=1500nM
    12794 4ea1:A (2.46) BS01 3RX 2.5.1.96 GO:0003824 ... A9JQL9 22486710 MOAD: Ki=0.36uM
    PDBbind: -logKd/Ki=6.44, Ki=0.36uM
    BindingDB: IC50=100000nM, Ki=360nM
    12795 4ea2:A (2.05) BS01 RWZ 2.5.1.96 GO:0003824 ... A9JQL9 22486710 MOAD: Ki=0.36uM
    PDBbind: -logKd/Ki=6.44, Ki=0.36uM
    12796 4ea3:A (3.013) BS01 0NN ? GO:0001626 ... P0ABE7
    P41146    		 22596163 PDBbind: -logKd/Ki=9.57, IC50=0.27nM
    12797 4ear:A (1.7) BS01 IM5 2.4.2.1 GO:0000255 ... P00491 23438750 PDBbind: -logKd/Ki=9.82, Kd=151pM
    BindingDB: Ki=7nM
    12798 4ear:C (1.7) BS01 IM5 2.4.2.1 GO:0000255 ... P00491 23438750 PDBbind: -logKd/Ki=9.82, Kd=151pM
    BindingDB: Ki=7nM
    12799 4eb8:A (2.3) BS02 IM5 2.4.2.1 GO:0000255 ... P00491 23438750 PDBbind: -logKd/Ki=9.82, Ki=151pM
    BindingDB: Ki=7nM
    12800 4eb8:C (2.3) BS02 IM5 2.4.2.1 GO:0000255 ... P00491 23438750 PDBbind: -logKd/Ki=9.82, Ki=151pM
    BindingDB: Ki=7nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218