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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    7601 3d50:A (1.79) BS02 OEV 3.2.1.114 GO:0000139 ... Q24451 18759458 MOAD: Ki=17uM
    PDBbind: -logKd/Ki=4.77, Ki=17uM
    7602 3d51:A (1.43) BS02 GOX 3.2.1.114 GO:0000139 ... Q24451 18759458 MOAD: Ki=70uM
    PDBbind: -logKd/Ki=4.15, Ki=70uM
    7603 3d52:A (1.6) BS02 GHR 3.2.1.114 GO:0000139 ... Q24451 18759458 MOAD: Ki=520uM
    PDBbind: -logKd/Ki=3.28, Ki=520uM
    7604 3d5m:A (2.2) BS01 4MS 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18554907 MOAD: ic50<0.01uM
    PDBbind: -logKd/Ki=8.00, IC50=0.01uM
    7605 3d62:A (2.7) BS01 959 2.1.1.-
    2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0C6X7 18611220 PDBbind: -logKd/Ki=6.10, Kd=800nM
    7606 3d67:A (3.4) BS02 GEM 3.4.17.20 GO:0003331 ... Q96IY4 18559974 PDBbind: -logKd/Ki=4.96, Ki=11uM
    7607 3d6o:A (1.58) BS01 U1S 4.6.1.18 GO:0003676 ... P61823 19173562 MOAD: Ki=77uM
    PDBbind: -logKd/Ki=4.11, Ki=77uM
    7608 3d6p:A (1.6) BS01 U2S 4.6.1.18 GO:0003676 ... P61823 19173562 MOAD: Ki=179uM
    PDBbind: -logKd/Ki=3.75, Ki=179uM
    7609 3d6q:A (1.6) BS01 U3S 4.6.1.18 GO:0003676 ... P61823 19173562 MOAD: Ki=172uM
    PDBbind: -logKd/Ki=3.76, Ki=172uM
    7610 3d6y:A (2.7) BS01 dna ? GO:0003677 ... P39075 18658145 PDBbind: Kd=10.3uM
    7611 3d6z:A (2.6) BS01 dna ? GO:0003677 ... P39075 18658145 PDBbind: Kd=0.96uM
    7612 3d78:A (1.6) BS01 NBB ? GO:0005549 ... Q9U9J6 19481550 MOAD: Kd=23nM
    PDBbind: -logKd/Ki=7.64, Kd=23nM
    7613 3d7b:A (1.6) BS01 U4S 4.6.1.18 GO:0003676 ... P61823 19173562 MOAD: Ki=203uM
    PDBbind: -logKd/Ki=3.69, Ki=203uM
    7614 3d7d:A (1.69) BS04 FBD 3.4.17.21 GO:0004180 ... Q04609 19053759 MOAD: ic50=14nM
    PDBbind: -logKd/Ki=7.85, IC50=14nM
    BindingDB: Ki=50.0nM
    7615 3d7f:A (1.54) BS04 YBY 3.4.17.21 GO:0004180 ... Q04609 19053759 MOAD: ic50=0.5nM
    PDBbind: -logKd/Ki=9.30, IC50=0.5nM
    BindingDB: Kd=143nM
    7616 3d7g:A (1.75) BS04 MUD 3.4.17.21 GO:0004180 ... Q04609 19053759 MOAD: ic50=17nM
    PDBbind: -logKd/Ki=7.77, IC50=17nM
    7617 3d7h:A (1.55) BS04 YC2 3.4.17.21 GO:0004180 ... Q04609 19053759 MOAD: ic50=0.06nM
    PDBbind: -logKd/Ki=10.22, IC50=0.06nM
    BindingDB: Ki=0.01nM, IC50=0.021000nM
    7618 3d7k:A (2.49) BS02 D7K 4.1.2.38 GO:0000287 ... Q9F4L3 18570438 PDBbind: -logKd/Ki=4.60, Kd=25uM
    7619 3d7k:A (2.49) BS03 D7K 4.1.2.38 GO:0000287 ... Q9F4L3 18570438 PDBbind: -logKd/Ki=4.60, Kd=25uM
    7620 3d7k:B (2.49) BS01 D7K 4.1.2.38 GO:0000287 ... Q9F4L3 18570438 PDBbind: -logKd/Ki=4.60, Kd=25uM
    7621 3d7k:B (2.49) BS03 D7K 4.1.2.38 GO:0000287 ... Q9F4L3 18570438 PDBbind: -logKd/Ki=4.60, Kd=25uM
    7622 3d7m:A (2.9) BS03 GDP ? GO:0000287 ... P10824 19222191 PDBbind: -logKd/Ki=6.44, Kd=0.36uM
    7623 3d7z:A (2.1) BS01 GK5 2.7.11.24 GO:0000077 ... Q16539 18614366 MOAD: Ki=12nM
    PDBbind: -logKd/Ki=7.92, Ki=12nM
    BindingDB: Ki=12nM, IC50=75nM
    7624 3d83:A (1.9) BS01 GK6 2.7.11.24 GO:0000077 ... Q16539 18602262 MOAD: Ki=4.4nM
    PDBbind: -logKd/Ki=8.36, Ki=4.4nM
    BindingDB: IC50=6.0nM, Ki=4.4nM
    7625 3d8w:A (1.7) BS02 D8W 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19170619 MOAD: Ki=7nM
    PDBbind: -logKd/Ki=8.15, Ki=7.0nM
    7626 3d8y:A (1.72) BS01 T3S 4.6.1.18 GO:0003676 ... P61823 19173562 MOAD: Ki=396uM
    PDBbind: -logKd/Ki=3.40, Ki=396uM
    BindingDB: Ki=396000nM
    7627 3d8z:A (1.98) BS01 TXS 4.6.1.18 GO:0003676 ... P61823 19173562 MOAD: Ki=423uM
    PDBbind: -logKd/Ki=3.37, Ki=423uM
    7628 3d91:A (2.2) BS01 REM 3.4.23.15 GO:0004190 ... P00797 N/A MOAD: Kd=131pM
    PDBbind: -logKd/Ki=9.15, Ki=0.7nM
    BindingDB: IC50=1nM, Ki=0.7nM, Kd=131nM
    7629 3d94:A (2.3) BS02 D94 2.7.10.1 GO:0004672 ... P08069 18566589 MOAD: Ki=157nM
    PDBbind: -logKd/Ki=6.80, Ki=157nM
    BindingDB: IC50=19nM
    7630 3d9v:A (3.3) BS01 H52 2.7.11.1 GO:0004672 ... Q13464 16249185 PDBbind: -logKd/Ki=8.22, Ki=6nM
    BindingDB: Ki=6nM, IC50=30nM
    7631 3d9z:A (1.65) BS02 D9Z 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19170619 MOAD: Ki=2nM
    PDBbind: -logKd/Ki=8.70, Ki=2.0nM
    BindingDB: Ki=12nM
    7632 3da6:A (2.0) BS01 BZ9 2.7.11.24 GO:0004672 ... P53779 19062275 PDBbind: -logKd/Ki=8.70, IC50=2nM
    7633 3da9:B (1.8) BS03 44U 3.4.21.5 GO:0004252 ... P00734 19371038 MOAD: Kd=3.1uM
    PDBbind: -logKd/Ki=5.51, Kd=3.1uM
    BindingDB: Kd=3100nM, IC50=18000nM
    7634 3daj:A (2.0) BS01 FXG 2.7.11.1 GO:0004672 ... P97477 18579375 MOAD: ic50=2.9uM
    PDBbind: -logKd/Ki=5.54, IC50=2.9uM
    7635 3daz:A (1.6) BS02 MZM 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19170619 MOAD: Ki=11.8nM
    PDBbind: -logKd/Ki=7.93, Ki=11.8nM
    BindingDB: Ki=14nM, IC50=21nM, EC50=4e+1nM
    7636 3db6:A (2.85) BS01 FRS 2.7.11.21 GO:0004672 ... Q4KMI8 18678933 PDBbind: -logKd/Ki=6.14, IC50=0.73uM
    7637 3db8:A (3.15) BS01 1FR 2.7.11.21 GO:0004672 ... Q4KMI8 18790636 PDBbind: -logKd/Ki=7.00, IC50=99nM
    7638 3dba:A (2.57) BS01 35G 3.1.4.35 N/A P52731 18614542 PDBbind: -logKd/Ki=8.00, Kd=10nM
    7639 3dba:B (2.57) BS01 35G 3.1.4.35 N/A P52731 18614542 PDBbind: -logKd/Ki=8.00, Kd=10nM
    7640 3dbd:A (3.05) BS01 3FR 2.7.11.21 GO:0004672 ... Q4KMI8 18793847 PDBbind: -logKd/Ki=7.38, IC50=42nM
    7641 3dbs:A (2.8) BS01 GD9 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 18754654 PDBbind: -logKd/Ki=7.12, IC50=75nM
    BindingDB: IC50=13nM, Ki=41.8nM, Kd=48nM
    7642 3dbu:A (1.7) BS02 D8W 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19170619 MOAD: Ki=8.8nM
    PDBbind: -logKd/Ki=8.06, Ki=8.8nM
    7643 3dc3:A (1.7) BS02 AZM 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19170619 MOAD: Ki=4.9nM
    PDBbind: -logKd/Ki=8.31, Ki=4.9nM
    BindingDB: Ki=12nM, Kd=17nM, IC50=10nM
    7644 3dcc:A (1.6) BS02 D9Z 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19170619 MOAD: Ki=1.1nM
    PDBbind: -logKd/Ki=8.96, Ki=1.1nM
    BindingDB: Ki=12nM
    7645 3dcq:A (1.8) BS03 2G0 ? GO:0030246 ... Q9HYN5 19101469 MOAD: ic50=5.94uM
    PDBbind: -logKd/Ki=5.23, IC50=5.94uM
    7646 3dcq:B (1.8) BS03 2G0 ? GO:0030246 ... Q9HYN5 19101469 MOAD: ic50=5.94uM
    PDBbind: -logKd/Ki=5.23, IC50=5.94uM
    7647 3dcr:A (1.4) BS01 KVS 3.4.23.16 GO:0004190 ... O38732 18657969 PDBbind: -logKd/Ki=8.20, IC50=6.3nM
    7648 3dcr:B (1.4) BS01 KVS 3.4.23.16 GO:0004190 ... O38732 18657969 MOAD: ic50=6.3nM
    PDBbind: -logKd/Ki=8.20, IC50=6.3nM
    7649 3dcs:A (1.8) BS02 MZM 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19170619 MOAD: Ki=11.4nM
    PDBbind: -logKd/Ki=7.94, Ki=11.4nM
    BindingDB: Ki=14nM, IC50=21nM, EC50=4e+1nM
    7650 3dct:A (2.5) BS02 064 ? GO:0004879 ... Q96RI1 18621523 PDBbind: -logKd/Ki=6.95, IC50=0.112uM
    BindingDB: EC50=65nM, IC50=20nM
    7651 3dcv:A (2.7) BS01 55E 2.7.11.1 GO:0004672 ... P11309 18672368 PDBbind: -logKd/Ki=8.52, IC50=3nM
    7652 3dcw:A (1.5) BS02 EZL 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19170619 MOAD: Ki<1nM
    PDBbind: -logKd/Ki=9.00, Ki=1nM
    BindingDB: Ki=8nM, IC50=3nM, Kd=0.71nM
    7653 3dd0:A (1.48) BS02 EZL 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19170619 MOAD: Ki<1nM
    PDBbind: -logKd/Ki=9.00, Ki=1nM
    BindingDB: Ki=8nM, IC50=3nM, Kd=0.71nM
    7654 3dd8:A (1.9) BS02 2C7 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 18640037 MOAD: Ki=14nM
    PDBbind: -logKd/Ki=7.85, Ki=14nM
    BindingDB: Ki=14nM
    7655 3ddf:A (1.2) BS02 GB6 3.2.1.114 GO:0000139 ... Q24451 18599296 MOAD: Ki=67uM
    PDBbind: -logKd/Ki=4.66, Ki=22uM
    7656 3ddg:A (1.74) BS02 GB7 3.2.1.114 GO:0000139 ... Q24451 18599296 MOAD: Ki=1uM
    PDBbind: -logKd/Ki=6.00, Ki=1uM
    7657 3ddp:C (2.7) BS01 RC8 2.7.11.22 GO:0000082 ... P24941 18574471 PDBbind: -logKd/Ki=7.14, IC50=0.072uM
    BindingDB: IC50=62nM
    7658 3ddq:C (1.8) BS01 RRC 2.7.11.22 GO:0000082 ... P24941 18574471 MOAD: ic50=0.21uM
    PDBbind: -logKd/Ki=6.68, IC50=0.21uM
    BindingDB: IC50=700nM, Kd=3400nM, Ki=250nM
    7659 3ddu:A (1.56) BS01 552 3.4.21.26 GO:0004252 ... P48147 18606544 MOAD: ic50=40nM
    PDBbind: -logKd/Ki=7.40, IC50=40nM
    7660 3deh:C (2.5) BS01 RXA 3.4.22.56 GO:0001554 ... P42574 18768468 MOAD: ic50=149nM
    PDBbind: -logKd/Ki=6.83, IC50=149nM
    BindingDB: IC50=149nM
    7661 3dei:C (2.8) BS01 RXB 3.4.22.56 GO:0001554 ... P42574 18768468 PDBbind: -logKd/Ki=7.40, IC50=40nM
    BindingDB: IC50=40nM
    7662 3dej:C (2.6) BS01 RXC 3.4.22.56 GO:0001554 ... P42574 18768468 PDBbind: -logKd/Ki=8.00, IC50=10nM
    7663 3dek:A (2.4) BS01 RXD 3.4.22.56 GO:0001554 ... P42574 18768468 MOAD: ic50=27nM
    PDBbind: -logKd/Ki=7.57, IC50=27nM
    7664 3dg8:A (2.58) BS01 RJ6 1.5.1.3
    2.1.1.45    		 GO:0004146 ... P13922 19146480 PDBbind: -logKd/Ki=4.70, IC50=20uM
    7665 3dga:A (2.7) BS01 RJ1 1.5.1.3
    2.1.1.45    		 GO:0004146 ... P13922 19146480 PDBbind: -logKd/Ki=4.52, IC50=29.9uM
    7666 3dgl:A (1.8) BS02 ATP N/A N/A N/A 19522480 MOAD: Kd=250nM
    PDBbind: -logKd/Ki=6.60, Kd=250nM
    7667 3dgn:A (2.7) BS02 ADP N/A N/A N/A 19522480 PDBbind: -logKd/Ki=6.21, Kd=620nM
    7668 3dgo:A (2.5) BS02 ATP N/A N/A N/A 19522480 MOAD: Kd=180nM
    PDBbind: -logKd/Ki=6.74, Kd=180nM
    7669 3dgq:A (1.6) BS01 EAA 2.5.1.18 GO:0000302 ... P09211 19396894 MOAD: ic50=12uM
    PDBbind: -logKd/Ki=4.92, IC50=12.0uM
    BindingDB: IC50=2.6e+4nM
    7670 3dhk:H (1.73) BS03 23U 3.4.21.5 GO:0004252 ... P00734 19520086 MOAD: Ki=47nM
    PDBbind: -logKd/Ki=7.33, Ki=47nM
    BindingDB: IC50=12nM
    7671 3di6:A (2.65) BS01 PDZ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 18632268 PDBbind: -logKd/Ki=7.00, IC50=0.1uM
    7672 3djf:A (2.302) BS01 BC3 2.4.2.1 GO:0003824 ... Q9BMI9 20129792 MOAD: ic50=0.8uM
    PDBbind: -logKd/Ki=6.10, IC50=0.8uM
    7673 3djf:B (2.302) BS01 BC3 2.4.2.1 GO:0003824 ... Q9BMI9 20129792 MOAD: ic50=0.8uM
    PDBbind: -logKd/Ki=6.10, IC50=0.8uM
    7674 3djk:A (1.0) BS01 G55 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 18783203 PDBbind: -logKd/Ki=10.59, Ki=26pM
    7675 3djk:B (1.0) BS01 G55 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 18783203 MOAD: Ki=26pM
    PDBbind: -logKd/Ki=10.59, Ki=26pM
    7676 3djo:A (1.6) BS01 U2P 4.6.1.18 GO:0003676 ... P00669 19643512 MOAD: Ki=40.8uM
    PDBbind: -logKd/Ki=4.39, Ki=40.8uM
    BindingDB: Ki=40800nM
    7677 3djo:A (1.6) BS02 U2P 4.6.1.18 GO:0003676 ... P00669 19643512 MOAD: Ki=40.8uM
    PDBbind: -logKd/Ki=4.39, Ki=40.8uM
    BindingDB: Ki=40800nM
    7678 3djo:B (1.6) BS01 U2P 4.6.1.18 GO:0003676 ... P00669 19643512 MOAD: Ki=40.8uM
    PDBbind: -logKd/Ki=4.39, Ki=40.8uM
    BindingDB: Ki=40800nM
    7679 3djp:A (1.6) BS01 UA3 4.6.1.18 GO:0003676 ... P00669 19643512 MOAD: Ki=63.2uM
    PDBbind: -logKd/Ki=4.20, Ki=63.2uM
    7680 3djp:B (1.6) BS01 UA3 4.6.1.18 GO:0003676 ... P00669 19643512 MOAD: Ki=63.2uM
    PDBbind: -logKd/Ki=4.20, Ki=63.2uM
    7681 3djq:A (1.53) BS01 UDP 4.6.1.18 GO:0003676 ... P00669 19643512 MOAD: Ki=1046.4uM
    PDBbind: -logKd/Ki=2.98, Ki=1046.4uM
    BindingDB: Ki=1046400nM
    7682 3djq:B (1.53) BS01 UDP 4.6.1.18 GO:0003676 ... P00669 19643512 MOAD: Ki=1046.4uM
    PDBbind: -logKd/Ki=2.98, Ki=1046.4uM
    BindingDB: Ki=1046400nM
    7683 3djv:A (1.6) BS01 C3P 4.6.1.18 GO:0003676 ... P00669 19643512 MOAD: Ki=27.9uM
    PDBbind: -logKd/Ki=4.55, Ki=27.9uM
    BindingDB: Ki=27900nM
    7684 3djv:B (1.6) BS01 C3P 4.6.1.18 GO:0003676 ... P00669 19643512 MOAD: Ki=27.9uM
    PDBbind: -logKd/Ki=4.55, Ki=27.9uM
    BindingDB: Ki=27900nM
    7685 3djx:A (1.69) BS01 C5P 4.6.1.18 GO:0003676 ... P00669 19643512 MOAD: Ki=1557.9uM
    PDBbind: -logKd/Ki=2.81, Ki=1557.9uM
    7686 3djx:B (1.69) BS01 C5P 4.6.1.18 GO:0003676 ... P00669 19643512 MOAD: Ki=1557.9uM
    PDBbind: -logKd/Ki=2.81, Ki=1557.9uM
    7687 3dk1:A (1.07) BS01 G05 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 18843400 PDBbind: -logKd/Ki=9.74, Ki=0.18nM
    7688 3dk1:B (1.07) BS01 G05 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 18843400 MOAD: Ki=0.18nM
    PDBbind: -logKd/Ki=9.74, Ki=0.18nM
    7689 3dkf:A (1.8) BS01 SX8 2.7.10.1 GO:0004672 ... P08581 19934279 MOAD: Ki=2.7nM
    PDBbind: -logKd/Ki=8.57, Ki=2.7nM
    BindingDB: IC50=4.0nM, Kd=0.820000nM
    7690 3dkg:A (1.91) BS01 SX8 2.7.10.1 GO:0004672 ... P08581 19934279 PDBbind: -logKd/Ki=5.00, Ki<10uM
    BindingDB: IC50=4.0nM, Kd=0.820000nM
    7691 3dkj:A (2.0) BS01 PRP 2.4.2.12 GO:0005125 ... P43490 19666527 PDBbind: -logKd/Ki=5.70, Kd=2.0uM
    7692 3dkj:A (2.0) BS03 PRP 2.4.2.12 GO:0005125 ... P43490 19666527 PDBbind: -logKd/Ki=5.70, Kd=2.0uM
    7693 3dkj:B (2.0) BS01 PRP 2.4.2.12 GO:0005125 ... P43490 19666527 PDBbind: -logKd/Ki=5.70, Kd=2.0uM
    7694 3dkj:B (2.0) BS02 PRP 2.4.2.12 GO:0005125 ... P43490 19666527 PDBbind: -logKd/Ki=5.70, Kd=2.0uM
    7695 3dln:A (1.91) BS01 GLU ? GO:0015276 ... P19492 19003990 PDBbind: -logKd/Ki=6.60, Ki=249nM
    7696 3dm6:A (2.6) BS01 757 3.4.23.46 GO:0004190 ... P56817 18842420 PDBbind: -logKd/Ki=7.43, IC50=37nM
    BindingDB: IC50=37nM
    7697 3dnd:A (2.26) BS02 LL2 2.7.11.11 GO:0001669 ... P00517 18767090 PDBbind: -logKd/Ki=4.80, Ki=16uM
    7698 3dne:A (2.0) BS02 LL1 2.7.11.11 GO:0001669 ... P00517 18767090 PDBbind: -logKd/Ki=5.22, Ki=6uM
    7699 3dng:A (2.0) BS05 AXA 3.4.24.34 GO:0004222 ... P22894 19173605 MOAD: ic50=7.4nM
    PDBbind: -logKd/Ki=8.13, IC50=7.4nM
    BindingDB: IC50=7.4nM
    7700 3dnt:A (1.66) BS01 ATP 2.7.11.1 GO:0000287 ... P23874 19150849 MOAD: Kd=18uM
    PDBbind: -logKd/Ki=4.74, Kd=18uM
    7701 3dog:C (2.7) BS01 NNN 2.7.11.22 GO:0000082 ... P24941 18790752 PDBbind: -logKd/Ki=7.40, IC50=0.04uM
    BindingDB: IC50=40nM
    7702 3doy:A (2.4) BS01 2BE 4.2.1.59 GO:0005737 ... Q5G940 19309082 MOAD: ic50=1.52uM
    PDBbind: -logKd/Ki=5.82, IC50=1.52uM
    7703 3doy:B (2.4) BS01 2BE 4.2.1.59 GO:0005737 ... Q5G940 19309082 PDBbind: -logKd/Ki=5.82, IC50=1.52uM
    7704 3doz:A (2.5) BS01 3BE 4.2.1.59 GO:0005737 ... Q5G940 19309082 PDBbind: -logKd/Ki=5.70, IC50=1.98uM
    7705 3doz:B (2.5) BS01 3BE 4.2.1.59 GO:0005737 ... Q5G940 19309082 MOAD: ic50=1.98uM
    PDBbind: -logKd/Ki=5.70, IC50=1.98uM
    7706 3doz:D (2.5) BS01 3BE 4.2.1.59 GO:0005737 ... Q5G940 19309082 PDBbind: -logKd/Ki=5.70, IC50=1.98uM
    7707 3dp0:A (2.5) BS01 2BC 4.2.1.59 GO:0005737 ... Q5G940 19309082 PDBbind: -logKd/Ki=5.85, IC50=1.42uM
    7708 3dp0:B (2.5) BS01 2BC 4.2.1.59 GO:0005737 ... Q5G940 19309082 MOAD: ic50=1.42uM
    PDBbind: -logKd/Ki=5.85, IC50=1.42uM
    7709 3dp1:A (2.3) BS01 2RB 4.2.1.59 GO:0005737 ... Q5G940 19309082 PDBbind: -logKd/Ki=5.00, IC50=9.92uM
    7710 3dp1:B (2.3) BS01 2RB 4.2.1.59 GO:0005737 ... Q5G940 19309082 MOAD: ic50=9.92uM
    PDBbind: -logKd/Ki=5.00, IC50=9.92uM
    7711 3dp1:D (2.3) BS01 2RB 4.2.1.59 GO:0005737 ... Q5G940 19309082 PDBbind: -logKd/Ki=5.00, IC50=9.92uM
    7712 3dp2:A (2.4) BS01 4BE 4.2.1.59 GO:0005737 ... Q5G940 19309082 PDBbind: -logKd/Ki=5.82, IC50=1.50uM
    7713 3dp2:B (2.4) BS01 4BE 4.2.1.59 GO:0005737 ... Q5G940 19309082 MOAD: ic50=1.5uM
    PDBbind: -logKd/Ki=5.82, IC50=1.50uM
    7714 3dp3:A (2.3) BS01 4BB 4.2.1.59 GO:0005737 ... Q5G940 19309082 MOAD: ic50=1.52uM
    PDBbind: -logKd/Ki=5.82, IC50=1.52uM
    7715 3dp3:B (2.3) BS01 4BB 4.2.1.59 GO:0005737 ... Q5G940 19309082 PDBbind: -logKd/Ki=5.82, IC50=1.52uM
    7716 3dp3:D (2.3) BS01 4BB 4.2.1.59 GO:0005737 ... Q5G940 19309082 PDBbind: -logKd/Ki=5.82, IC50=1.52uM
    7717 3dp4:A (2.11) BS01 AMQ ? GO:0015276 ... P19492 19003990 MOAD: Kd=43nM
    PDBbind: -logKd/Ki=7.37, Kd=43nM
    BindingDB: Ki=21nM
    7718 3dp9:A (2.3) BS01 BIG 3.2.2.9 GO:0003824 ... Q9KPI8 19270684 MOAD: Kd=208pM
    PDBbind: -logKd/Ki=9.68, Kd=208pM
    7719 3dp9:C (2.3) BS01 BIG 3.2.2.9 GO:0003824 ... Q9KPI8 19270684 MOAD: Kd=208pM
    PDBbind: -logKd/Ki=9.68, Kd=208pM
    7720 3dpd:A (2.85) BS01 41A 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 18644721 PDBbind: -logKd/Ki=5.78, IC50=1.66uM
    BindingDB: IC50=3453nM
    7721 3dpe:A (1.6) BS05 AXB 3.4.24.34 GO:0004222 ... P22894 19173605 MOAD: ic50=57nM
    PDBbind: -logKd/Ki=7.24, IC50=57nM
    BindingDB: IC50=57nM
    7722 3dpf:A (2.1) BS05 AXB 3.4.24.34 GO:0004222 ... P22894 19173605 PDBbind: -logKd/Ki=7.24, IC50=57nM
    BindingDB: IC50=57nM
    7723 3dpk:A (1.95) BS01 8C5 2.7.10.1 GO:0004672 ... P07333
    P11362    		 19193011 MOAD: ic50=4.1nM
    PDBbind: -logKd/Ki=8.39, IC50=4.1nM
    7724 3drp:A (2.6) BS01 R8E 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 18826204 PDBbind: -logKd/Ki=9.70, IC50=0.2nM
    7725 3drr:A (2.89) BS01 R8E 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 18826204 PDBbind: -logKd/Ki=9.40, IC50=0.4nM
    7726 3drs:A (3.15) BS01 R8D 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 18826204 PDBbind: -logKd/Ki=9.30, IC50=0.5nM
    7727 3ds6:A (2.9) BS01 A17 2.7.11.24 GO:0000077 ... Q16539 18817365 PDBbind: -logKd/Ki=9.10, IC50=0.8nM
    BindingDB: IC50=0.8nM, Ki=0.400000nM
    7728 3dst:B (1.9) BS01 GRG 2.5.1.60 GO:0003824 ... Q08603 18756270 MOAD: Kd=0.83nM
    PDBbind: -logKd/Ki=9.08, Kd=0.83nM
    7729 3dsu:B (1.9) BS01 FPP 2.5.1.60 GO:0003824 ... Q08603 18756270 MOAD: Kd=94nM
    PDBbind: -logKd/Ki=7.03, Kd=94nM
    7730 3dsz:A (2.0) BS01 LIZ ? GO:0005506 ... P80188 19227970 MOAD: Kd=17.1nM
    PDBbind: -logKd/Ki=7.77, Kd=17.1nM
    7731 3dt1:A (2.8) BS01 P40 2.7.11.24 GO:0000077 ... Q16539 18817365 PDBbind: -logKd/Ki=8.62, IC50=2.4nM
    BindingDB: IC50=0.900000nM
    7732 3dtc:A (2.6) BS01 VIN 2.7.11.25 GO:0004672 ... P80192 18714982 PDBbind: -logKd/Ki=7.59, IC50=26nM
    7733 3du8:A (2.2) BS01 553 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 19115845 MOAD: ic50=0.146uM
    PDBbind: -logKd/Ki=6.84, IC50=0.146uM
    7734 3dux:H (1.6) BS03 64U 3.4.21.5 GO:0004252 ... P00734 19520086 MOAD: Ki=100nM
    PDBbind: -logKd/Ki=7.00, Ki=100nM
    BindingDB: Ki=100nM
    7735 3duy:A (1.97) BS01 AFJ 3.4.23.46 GO:0004190 ... P56817 19195886 MOAD: ic50=1.4uM
    PDBbind: -logKd/Ki=5.85, IC50=1.4uM
    BindingDB: IC50=>10000nM
    7736 3dv1:A (2.1) BS01 AR9 3.4.23.46 GO:0004190 ... P56817 19195887 MOAD: ic50=0.59uM
    PDBbind: -logKd/Ki=6.23, IC50=0.59uM
    BindingDB: IC50=>10000nM
    7737 3dv5:A (2.1) BS01 BAV 3.4.23.46 GO:0004190 ... P56817 19195887 MOAD: ic50=0.027uM
    PDBbind: -logKd/Ki=7.66, IC50=22nM
    BindingDB: IC50=45nM
    7738 3dwb:A (2.38) BS03 RDF 3.4.24.71 GO:0004222 ... P42892 18992253 MOAD: ic50=0.65uM
    PDBbind: -logKd/Ki=6.19, IC50=0.65uM
    BindingDB: IC50=1200nM
    7739 3dx0:A (1.7) BS02 MSN 3.2.1.114 GO:0000139 ... Q24451 19101978 MOAD: Ki=36nM
    PDBbind: -logKd/Ki=7.44, Ki=36nM
    BindingDB: Ki=36nM
    7740 3dx1:A (1.21) BS02 YHO 3.2.1.114 GO:0000139 ... Q24451 19101978 MOAD: Ki=265uM
    PDBbind: -logKd/Ki=3.58, Ki=265uM
    BindingDB: Ki=2.65e+5nM
    7741 3dx2:A (1.4) BS02 MZB 3.2.1.114 GO:0000139 ... Q24451 19101978 MOAD: Ki=150nM
    PDBbind: -logKd/Ki=6.82, Ki=150nM
    7742 3dx3:A (1.42) BS02 YTB 3.2.1.114 GO:0000139 ... Q24451 19101978 MOAD: Ki=300nM
    PDBbind: -logKd/Ki=6.52, Ki=300nM
    BindingDB: Ki=300nM
    7743 3dx4:A (1.38) BS02 GOO 3.2.1.114 GO:0000139 ... Q24451 19101978 MOAD: Ki=76nM
    PDBbind: -logKd/Ki=7.12, Ki=76nM
    BindingDB: Ki=76nM
    7744 3dxg:A (1.39) BS01 U5P 4.6.1.18 GO:0003676 ... P61823 N/A PDBbind: -logKd/Ki=2.40, Ki=4.0mM
    7745 3dxg:A (1.39) BS02 U5P 4.6.1.18 GO:0003676 ... P61823 N/A PDBbind: -logKd/Ki=2.40, Ki=4.0mM
    7746 3dxh:A (1.4) BS01 UDP 4.6.1.18 GO:0003676 ... P61823 N/A PDBbind: -logKd/Ki=3.19, Ki=0.65mM
    BindingDB: Ki=647000nM
    7747 3dxh:A (1.4) BS02 UDP 4.6.1.18 GO:0003676 ... P61823 N/A PDBbind: -logKd/Ki=3.19, Ki=0.65mM
    BindingDB: Ki=647000nM
    7748 3dxh:A (1.4) BS03 UDP 4.6.1.18 GO:0003676 ... P61823 N/A PDBbind: -logKd/Ki=3.19, Ki=0.65mM
    BindingDB: Ki=647000nM
    7749 3dxj:C (3.0) BS01 NE6 2.7.7.6 GO:0000428 ... Q8RQE9 18957204 PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    7750 3dxj:D (3.0) BS05 NE6 2.7.7.6 GO:0000287 ... Q8RQE8 18957204 PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    7751 3dxk:A (2.7) BS01 N23 ? GO:0003779 ... P61157 19648907 PDBbind: -logKd/Ki=6.33, Kd=470nM
    7752 3dxk:B (2.7) BS01 N23 ? GO:0003779 ... A7MB62 19648907 PDBbind: -logKd/Ki=6.33, Kd=470nM
    7753 3dxm:A (2.85) BS01 N24 ? GO:0003779 ... P61157 19648907 PDBbind: -logKd/Ki=6.00, Kd=1.0uM
    7754 3dy6:A (2.9) BS01 DY6 ? GO:0003677 ... Q03181 18722772 PDBbind: -logKd/Ki=6.90, IC50=126nM
    BindingDB: EC50=1259nM, IC50=126nM
    7755 3dya:A (2.3) BS01 PZL 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 19007201 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: EC50=1nM, IC50=3nM
    7756 3dyo:A (1.8) BS03 IPT 3.2.1.23 GO:0000287 ... P00722 19472413 MOAD: Ki=5mM
    PDBbind: -logKd/Ki=2.30, Ki=5.0mM
    BindingDB: Ki=7.6e+4nM
    7757 3dyo:A (1.8) BS04 IPT 3.2.1.23 GO:0000287 ... P00722 19472413 MOAD: Ki=5mM
    PDBbind: -logKd/Ki=2.30, Ki=5.0mM
    BindingDB: Ki=7.6e+4nM
    7758 3dyo:A (1.8) BS05 IPT 3.2.1.23 GO:0000287 ... P00722 19472413 MOAD: Ki=5mM
    PDBbind: -logKd/Ki=2.30, Ki=5.0mM
    BindingDB: Ki=7.6e+4nM
    7759 3dyo:A (1.8) BS06 IPT 3.2.1.23 GO:0000287 ... P00722 19472413 MOAD: Ki=5mM
    PDBbind: -logKd/Ki=2.30, Ki=5.0mM
    BindingDB: Ki=7.6e+4nM
    7760 3dyo:D (1.8) BS01 IPT 3.2.1.23 GO:0000287 ... P00722 19472413 MOAD: Ki=5mM
    PDBbind: -logKd/Ki=2.30, Ki=5.0mM
    BindingDB: Ki=7.6e+4nM
    7761 3dyo:D (1.8) BS04 IPT 3.2.1.23 GO:0000287 ... P00722 19472413 MOAD: Ki=5mM
    PDBbind: -logKd/Ki=2.30, Ki=5.0mM
    BindingDB: Ki=7.6e+4nM
    7762 3dyo:D (1.8) BS05 IPT 3.2.1.23 GO:0000287 ... P00722 19472413 MOAD: Ki=5mM
    PDBbind: -logKd/Ki=2.30, Ki=5.0mM
    BindingDB: Ki=7.6e+4nM
    7763 3dyo:D (1.8) BS06 IPT 3.2.1.23 GO:0000287 ... P00722 19472413 MOAD: Ki=5mM
    PDBbind: -logKd/Ki=2.30, Ki=5.0mM
    BindingDB: Ki=7.6e+4nM
    7764 3dz2:A (1.86) BS01 A8M 4.1.1.50 GO:0004014 ... P17707 19209891 MOAD: ic50=70uM
    PDBbind: -logKd/Ki=4.15, IC50=70uM
    BindingDB: IC50=70000nM
    7765 3dz2:B (1.86) BS01 A8M 4.1.1.50 GO:0004014 ... P17707 19209891 PDBbind: -logKd/Ki=4.15, IC50=70uM
    BindingDB: IC50=70000nM
    7766 3dz4:A (1.84) BS01 C8M 4.1.1.50 GO:0004014 ... P17707 19209891 MOAD: ic50=400nM
    PDBbind: -logKd/Ki=6.40, IC50=400nM
    BindingDB: IC50=400nM
    7767 3dz4:B (1.84) BS01 C8M 4.1.1.50 GO:0004014 ... P17707 19209891 PDBbind: -logKd/Ki=6.40, IC50=400nM
    BindingDB: IC50=400nM
    7768 3dz5:A (2.43) BS01 M8M 4.1.1.50 GO:0004014 ... P17707 19209891 PDBbind: -logKd/Ki=8.15, IC50=7nM
    BindingDB: IC50=7nM
    7769 3dz5:B (2.43) BS01 M8M 4.1.1.50 GO:0004014 ... P17707 19209891 PDBbind: -logKd/Ki=8.15, IC50=7nM
    BindingDB: IC50=7nM
    7770 3dz6:A (1.83) BS01 M8E 4.1.1.50 GO:0004014 ... P17707 19209891 MOAD: ic50=15nM
    PDBbind: -logKd/Ki=7.82, IC50=15nM
    7771 3dz6:B (1.83) BS01 M8E 4.1.1.50 GO:0004014 ... P17707 19209891 PDBbind: -logKd/Ki=7.82, IC50=15nM
    7772 3dzt:A (1.8) BS01 EAH ? GO:0005549 ... P18153 19234127 MOAD: Kd=60.2nM
    PDBbind: -logKd/Ki=7.22, Kd=60.2nM
    7773 3e01:A (2.95) BS01 PZ2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 19007201 PDBbind: -logKd/Ki=7.52, IC50=30nM
    BindingDB: EC50=17nM
    7774 3e0p:B (1.7) BS01 B3C 3.4.21.- GO:0004252 ... Q16651 18752942 PDBbind: -logKd/Ki=7.92, Ki=0.012uM
    7775 3e0q:A (1.9) BS01 JFD 2.4.2.1 GO:0003824 ... Q9BMI9 20122887 PDBbind: -logKd/Ki=5.89, IC50=1.3uM
    7776 3e0q:B (1.9) BS01 JFD 2.4.2.1 GO:0003824 ... Q9BMI9 20122887 PDBbind: -logKd/Ki=5.89, IC50=1.3uM
    7777 3e12:A (1.7) BS03 KD0 2.5.1.55 GO:0005737 ... O66496 19228070 PDBbind: -logKd/Ki=5.99, Kd=1.02uM
    7778 3e12:B (1.7) BS03 KD0 2.5.1.55 GO:0005737 ... O66496 19228070 PDBbind: -logKd/Ki=5.99, Kd=1.02uM
    7779 3e16:B (1.6) BS01 B4C 3.4.21.- GO:0004252 ... Q16651 18752942 PDBbind: -logKd/Ki=5.24, Ki=5.78uM
    7780 3e2m:A (2.0) BS01 E2M ? N/A P20701 18783948 MOAD: ic50=0.4nM
    PDBbind: -logKd/Ki=9.40, IC50=0.4nM
    BindingDB: IC50=0.4nM
    7781 3e2m:B (2.0) BS01 E2M ? N/A P20701 18783948 MOAD: ic50=0.4nM
    PDBbind: -logKd/Ki=9.40, IC50=0.4nM
    BindingDB: IC50=0.4nM
    7782 3e2m:B (2.0) BS02 E2M ? N/A P20701 18783948 MOAD: ic50=0.4nM
    PDBbind: -logKd/Ki=9.40, IC50=0.4nM
    BindingDB: IC50=0.4nM
    7783 3e37:B (1.8) BS03 ED5 2.5.1.58 GO:0003824 ... P49356 19246009 MOAD: ic50=4050nM
    PDBbind: -logKd/Ki=5.39, IC50=4.05uM
    7784 3e3b:X (3.2) BS01 CCK 2.7.11.1 GO:0000785 ... P19784 19193990 PDBbind: -logKd/Ki=7.96, IC50=11nM
    7785 3e3c:A (2.5) BS01 HHG ? N/A Q7DB61 19228114 PDBbind: -logKd/Ki=5.62, Kd=2.4uM
    7786 3e3u:A (1.56) BS01 NVC 3.5.1.88 GO:0006412 ... P9WIJ3 19008098 MOAD: ic50=0.013uM
    PDBbind: -logKd/Ki=7.89, IC50=13nM
    BindingDB: IC50=13nM
    7787 3e3u:A (1.56) BS02 NVC 3.5.1.88 GO:0006412 ... P9WIJ3 19008098 MOAD: ic50=0.013uM
    PDBbind: -logKd/Ki=7.89, IC50=13nM
    BindingDB: IC50=13nM
    7788 3e3u:A (1.56) BS03 NVC 3.5.1.88 GO:0006412 ... P9WIJ3 19008098 MOAD: ic50=0.013uM
    PDBbind: -logKd/Ki=7.89, IC50=13nM
    BindingDB: IC50=13nM
    7789 3e4a:A (2.6) BS03 QIX 3.4.24.56 GO:0001618 ... P14735 20498699 PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    7790 3e51:A (1.9) BS01 N35 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 18796353 MOAD: ic50=0.014uM
    PDBbind: -logKd/Ki=7.85, IC50=14nM
    7791 3e5a:A (2.3) BS01 VX6 2.7.11.1 GO:0000212 ... O14965 18662907 MOAD: Ki=5.9nM
    PDBbind: -logKd/Ki=8.23, Ki=5.9nM
    BindingDB: Ki=0.600000nM, IC50=20nM, Kd=4.1nM
    7792 3e5u:C (1.83) BS01 3C4 ? GO:0003677 ... B8FW11 18717788 PDBbind: -logKd/Ki=5.85, Kd=1.4uM
    7793 3e5u:C (1.83) BS02 3C4 ? GO:0003677 ... B8FW11 18717788 PDBbind: -logKd/Ki=5.85, Kd=1.4uM
    7794 3e5u:D (1.83) BS01 3C4 ? GO:0003677 ... B8FW11 18717788 PDBbind: -logKd/Ki=5.85, Kd=1.4uM
    7795 3e5u:D (1.83) BS02 3C4 ? GO:0003677 ... B8FW11 18717788 PDBbind: -logKd/Ki=5.85, Kd=1.4uM
    7796 3e62:A (1.922) BS01 5B1 2.7.10.2 GO:0004672 ... O60674 19019674 MOAD: ic50=40.9uM
    PDBbind: -logKd/Ki=4.39, IC50=40.9uM
    BindingDB: IC50=40900nM
    7797 3e63:A (1.9) BS01 5B2 2.7.10.2 GO:0004672 ... O60674 19019674 MOAD: ic50=1.6uM
    PDBbind: -logKd/Ki=5.80, IC50=1.6uM
    BindingDB: IC50=1600nM
    7798 3e64:A (1.8) BS01 5B3 2.7.10.2 GO:0004672 ... O60674 19019674 MOAD: ic50=0.078uM
    PDBbind: -logKd/Ki=7.11, Kd=0.078uM
    BindingDB: IC50=78nM
    7799 3e6k:A (2.1) BS03 ABH 3.5.3.1 GO:0000050 ... P05089 19093830 MOAD: Kd=7000nM
    PDBbind: -logKd/Ki=5.15, Kd=7uM
    7800 3e6v:A (1.72) BS03 ABH 3.5.3.1 GO:0000050 ... P05089 19093830 MOAD: Kd=147nM
    PDBbind: -logKd/Ki=6.83, Kd=147nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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