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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    6801 2zz6:A (1.66) BS01 6AZ 4.1.1.23 GO:0004590 ... O26232 19236876 PDBbind: -logKd/Ki=6.72, Ki=0.19uM
    BindingDB: Ki=190nM
    6802 2zz6:A (1.66) BS02 6AZ 4.1.1.23 GO:0004590 ... O26232 19236876 PDBbind: -logKd/Ki=6.72, Ki=0.19uM
    BindingDB: Ki=190nM
    6803 2zz6:B (1.66) BS01 6AZ 4.1.1.23 GO:0004590 ... O26232 19236876 PDBbind: -logKd/Ki=6.72, Ki=0.19uM
    BindingDB: Ki=190nM
    6804 2zz6:B (1.66) BS02 6AZ 4.1.1.23 GO:0004590 ... O26232 19236876 PDBbind: -logKd/Ki=6.72, Ki=0.19uM
    BindingDB: Ki=190nM
    6805 2zzu:H (2.5) BS01 359 3.4.21.21 GO:0004252 ... P08709 20045964 MOAD: ic50=39nM
    PDBbind: -logKd/Ki=7.41, IC50=39nM
    6806 3a1c:A (1.85) BS01 ACP 7.2.2.8 GO:0000166 ... O29777 19478797 MOAD: Kd~0.1mM
    PDBbind: -logKd/Ki=4.00, Kd=0.1mM
    6807 3a1d:A (1.85) BS01 ADP 7.2.2.8 GO:0000166 ... O29777 19478797 PDBbind: -logKd/Ki=4.12, Kd=75uM
    6808 3a1e:A (1.95) BS01 ACP 7.2.2.8 GO:0000166 ... O29777 19478797 MOAD: Kd~2.2mM
    PDBbind: -logKd/Ki=2.66, Kd=2.2mM
    6809 3a1s:A (1.5) BS01 GDP ? GO:0005525 ... Q9WXQ8 19733088 MOAD: Kd=14.8uM
    PDBbind: -logKd/Ki=4.83, Kd=14.8uM
    6810 3a1t:A (1.8) BS01 GDP ? GO:0005525 ... Q9WXQ8 19733088 MOAD: Kd=14.8uM
    PDBbind: -logKd/Ki=4.83, Kd=14.8uM
    6811 3a29:A (2.6) BS01 2T0 3.1.3.11 GO:0000122 ... P09467 19762234 PDBbind: -logKd/Ki=7.89, IC50=13nM
    BindingDB: IC50=13nM
    6812 3a29:C (2.6) BS01 2T0 3.1.3.11 GO:0000122 ... P09467 19762234 PDBbind: -logKd/Ki=7.89, IC50=13nM
    BindingDB: IC50=13nM
    6813 3a2c:A (2.9) BS01 PDY 2.7.11.1 GO:0004672 ... P49137 20057052 PDBbind: -logKd/Ki=6.90, Ki=0.126uM
    BindingDB: IC50=130nM
    6814 3a2c:A (2.9) BS02 PDY 2.7.11.1 GO:0004672 ... P49137 20057052 PDBbind: -logKd/Ki=6.90, Ki=0.126uM
    BindingDB: IC50=130nM
    6815 3a2o:A (0.88) BS01 KNJ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 19954246 PDBbind: -logKd/Ki=9.08, Ki=0.83nM
    6816 3a2o:B (0.88) BS01 KNJ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 19954246 MOAD: Ki=0.83nM
    PDBbind: -logKd/Ki=9.08, Ki=0.83nM
    6817 3a3y:A (2.8) BS06 OBN ? GO:0000166 ... Q4H132 19666591 PDBbind: -logKd/Ki=9.15, Kd=0.7nM
    6818 3a46:A (2.2) BS01 dna 3.2.2.23
    4.2.99.18    		 GO:0003676 ... Q5UQ00 19625256 PDBbind: Kd=47pM
    6819 3a46:A (2.2) BS02 dna 3.2.2.23
    4.2.99.18    		 GO:0003676 ... Q5UQ00 19625256 PDBbind: Kd=47pM
    6820 3a46:B (2.2) BS01 dna 3.2.2.23
    4.2.99.18    		 GO:0003676 ... Q5UQ00 19625256 PDBbind: Kd=47pM
    6821 3a46:B (2.2) BS02 dna 3.2.2.23
    4.2.99.18    		 GO:0003676 ... Q5UQ00 19625256 PDBbind: Kd=47pM
    6822 3a4o:X (3.0) BS01 STU 2.7.10.2 GO:0004672 ... P07948 19857964 PDBbind: -logKd/Ki=8.89, IC50=1.3nM
    6823 3a4p:A (2.54) BS01 DFQ 2.7.10.1 GO:0004672 ... P08581 20093027 PDBbind: -logKd/Ki=7.55, IC50=28nM
    BindingDB: IC50=28nM
    6824 3a5y:A (1.9) BS01 KAA 6.3.1.- GO:0000049 ... P0A8N7 20729861 MOAD: Kd=11nM
    PDBbind: -logKd/Ki=7.96, Kd=11nM
    6825 3a5y:B (1.9) BS01 KAA 6.3.1.- GO:0000049 ... P0A8N7 20729861 MOAD: Kd=11nM
    PDBbind: -logKd/Ki=7.96, Kd=11nM
    6826 3a6t:A (1.96) BS02 8OG 3.6.1.55 GO:0000287 ... P08337 19864691 MOAD: Kd=52nM
    PDBbind: -logKd/Ki=7.28, Kd=52nM
    6827 3a73:A (2.19) BS01 PJ2 ? GO:0003677 ... P02768 20014793 PDBbind: -logKd/Ki=3.38, Kd=420uM
    6828 3a73:A (2.19) BS02 PJ2 ? GO:0003677 ... P02768 20014793 PDBbind: -logKd/Ki=3.38, Kd=420uM
    6829 3a9i:A (1.8) BS02 LYS 2.3.3.14 GO:0003824 ... O87198 19996101 PDBbind: -logKd/Ki=4.15, Ki=70.7uM
    6830 3aaf:A (1.9) BS01 dna 3.1.-.-
    5.6.2.4    		 GO:0006260 ... Q14191 20159463 PDBbind: Kd=253nM
    6831 3aaf:A (1.9) BS02 dna 3.1.-.-
    5.6.2.4    		 GO:0006260 ... Q14191 20159463 PDBbind: Kd=253nM
    6832 3aaf:B (1.9) BS01 dna 3.1.-.-
    5.6.2.4    		 GO:0006260 ... Q14191 20159463 PDBbind: Kd=253nM
    6833 3aaf:B (1.9) BS02 dna 3.1.-.-
    5.6.2.4    		 GO:0006260 ... Q14191 20159463 PDBbind: Kd=253nM
    6834 3aaq:A (2.0) BS01 ARU ? GO:0000166 ... Q5ZUA2 20159467 MOAD: Ki=0.5mM
    PDBbind: -logKd/Ki=3.30, Ki=0.5mM
    6835 3aas:A (1.75) BS01 GUS 3.4.21.4 GO:0004175 ... P00760 20202854 MOAD: Ki=31uM
    PDBbind: -logKd/Ki=4.51, Ki=31uM
    6836 3aau:A (1.8) BS01 GZC 3.4.21.4 GO:0004175 ... P00760 20202854 PDBbind: -logKd/Ki=5.05, Ki=9.0uM
    6837 3aav:A (1.7) BS01 A2C 3.4.21.4 GO:0004175 ... P00760 20202854 PDBbind: -logKd/Ki=6.62, Ki=0.24uM
    6838 3abt:A (3.2) BS01 2PF 1.14.99.66 GO:0005634 ... O60341 20568732 PDBbind: -logKd/Ki=4.77, Ki=17uM
    6839 3abu:A (3.1) BS01 12F 1.14.99.66 GO:0005634 ... O60341 20568732 PDBbind: -logKd/Ki=5.62, Ki=2.4uM
    6840 3acl:A (2.35) BS02 3F1 1.13.11.24 GO:0003712 ... O00625 20711196 MOAD: Kd=0.6uM
    PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    6841 3acw:A (1.63) BS01 651 2.5.1.96 GO:0003824 ... A9JQL9 21098670 PDBbind: -logKd/Ki=4.76, Ki=17.5uM
    6842 3acx:A (1.31) BS01 673 2.5.1.96 GO:0003824 ... A9JQL9 21098670 PDBbind: -logKd/Ki=5.70, Ki=2uM
    6843 3ad7:B (2.2) BS03 MTG 1.5.3.24 GO:0000166 ... Q50LF2 20675294 MOAD: Kd=3.01mM
    PDBbind: -logKd/Ki=2.52, Kd=3.01mM
    6844 3ad8:B (2.2) BS03 PYC 1.5.3.24 GO:0000166 ... Q50LF2 20675294 MOAD: Kd=0.69mM
    PDBbind: -logKd/Ki=3.16, Kd=0.69mM
    6845 3adb:A (2.8) BS01 rna 2.7.1.164 GO:0001717 ... Q58933 20705242 PDBbind: Kd=39nM
    6846 3adb:B (2.8) BS01 rna 2.7.1.164 GO:0001717 ... Q58933 20705242 PDBbind: Kd=39nM
    6847 3ads:A (2.25) BS01 IMN ? GO:0003677 ... P37231 20717101 MOAD: Kd=9.73uM
    PDBbind: -logKd/Ki=5.01, Kd=9.73uM
    BindingDB: EC50=50000nM
    6848 3ads:A (2.25) BS02 IMN ? GO:0003677 ... P37231 20717101 MOAD: Kd=9.73uM
    PDBbind: -logKd/Ki=5.01, Kd=9.73uM
    BindingDB: EC50=50000nM
    6849 3adt:A (2.7) BS01 HID ? GO:0003677 ... P37231 20717101 PDBbind: -logKd/Ki=4.55, Kd=28.0uM
    6850 3adt:A (2.7) BS02 HID ? GO:0003677 ... P37231 20717101 PDBbind: -logKd/Ki=4.55, Kd=28.0uM
    6851 3adu:A (2.77) BS01 MYI ? GO:0003677 ... P37231 20717101 PDBbind: -logKd/Ki=4.14, Kd=72.8uM
    6852 3adu:A (2.77) BS02 MYI ? GO:0003677 ... P37231 20717101 PDBbind: -logKd/Ki=4.14, Kd=72.8uM
    6853 3adv:A (2.27) BS01 SRO ? GO:0003677 ... P37231 20717101 MOAD: Kd=933uM
    PDBbind: -logKd/Ki=3.03, Kd=933uM
    6854 3adv:A (2.27) BS02 SRO ? GO:0003677 ... P37231 20717101 MOAD: Kd=933uM
    PDBbind: -logKd/Ki=3.03, Kd=933uM
    6855 3afk:A (1.95) BS01 GAL 3.1.21.- GO:0004518 ... Q6WY08 20530247 PDBbind: -logKd/Ki=3.60, Kd=251.89uM
    6856 3ag9:B (2.0) BS01 A02 2.7.11.11 GO:0001669 ... P00517 20732331 MOAD: Ki=9nM
    PDBbind: -logKd/Ki=8.05, Ki=9nM
    6857 3agl:A (2.1) BS01 A03 2.7.11.11 GO:0000287 ... P17612 20732331 MOAD: Ki=16nM
    PDBbind: -logKd/Ki=7.80, Ki=16nM
    6858 3ahn:A (1.8) BS01 3A1 ? GO:0004222 ... Q4W803 20817732 MOAD: Ki=90.1nM
    PDBbind: -logKd/Ki=7.05, Ki=90.1nM
    6859 3aho:A (1.88) BS02 3A2 ? GO:0004222 ... Q4W803 20817732 MOAD: Ki=88.9nM
    PDBbind: -logKd/Ki=7.05, Ki=88.9nM
    6860 3ai8:B (2.11) BS01 HNQ 3.4.22.1 GO:0006508 ... P07858 21598397 MOAD: Ki=271.8uM
    PDBbind: -logKd/Ki=3.81, Ki=154.4uM
    BindingDB: Ki=271800nM
    6861 3aid:A (2.5) BS01 ARQ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 8894111 MOAD: Ki=137nM
    PDBbind: -logKd/Ki=6.86, Ki=137nM
    6862 3aid:B (2.5) BS01 ARQ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 8894111 PDBbind: -logKd/Ki=6.86, Ki=137nM
    6863 3aig:A (2.8) BS03 0ZC 3.4.24.46 GO:0004222 ... P34179 9521103 PDBbind: -logKd/Ki=6.00, IC50=1uM
    6864 3aje:A (1.8) BS01 THR 2.7.7.87 GO:0000049 ... Q970S6 21538543 PDBbind: -logKd/Ki=5.03, Kd=9.3uM
    6865 3am1:A (2.4) BS01 rna 2.7.1.164 GO:0001717 ... Q58933 20870747 PDBbind: Kd=39nM
    6866 3ama:A (1.75) BS02 SKE 2.7.11.11 GO:0000287 ... P17612 21774789 MOAD: Ki=0.297uM
    PDBbind: -logKd/Ki=6.53, Ki=0.297uM
    BindingDB: Kd=>10000nM
    6867 3amb:A (2.25) BS02 VX6 2.7.11.11 GO:0000287 ... P17612 21774789 MOAD: Ki=0.66uM
    PDBbind: -logKd/Ki=6.18, Ki=0.66uM
    BindingDB: Kd=>10000nM
    6868 3amv:A (2.1) BS03 BIN 2.4.1.1 GO:0000166 ... P00489 10548038 MOAD: Ki=10.8nM
    PDBbind: -logKd/Ki=7.97, Ki=10.8nM
    6869 3anq:A (2.6) BS01 EHB 2.7.11.23
    2.7.12.1    		 GO:0004672 ... Q13627 20981014 PDBbind: -logKd/Ki=6.74, Ki=0.18uM
    BindingDB: IC50=240nM
    6870 3anr:A (2.6) BS01 HRM 2.7.11.23
    2.7.12.1    		 GO:0004672 ... Q13627 20981014 PDBbind: -logKd/Ki=6.46, IC50=0.35uM
    BindingDB: IC50=80nM, Ki=33nM
    6871 3ans:A (1.98) BS01 S38 3.1.3.76
    3.3.2.10    		 GO:0003824 ... P34913 21192659 MOAD: ic50=565nM
    PDBbind: -logKd/Ki=6.25, IC50=565nM
    BindingDB: IC50=565nM
    6872 3ant:A (2.4) BS01 S82 3.1.3.76
    3.3.2.10    		 GO:0003824 ... P34913 21192659 MOAD: ic50=8.5nM
    PDBbind: -logKd/Ki=8.07, IC50=8.5nM
    BindingDB: IC50=6.1nM
    6873 3ao1:A (1.9) BS01 BZX 3.1.13.2
    3.1.26.13    		 GO:0003676 ... Q72498 21275048 MOAD: Kd=5.5mM
    PDBbind: -logKd/Ki=2.26, Kd=5.5mM
    6874 3ao1:A (1.9) BS02 BZX 3.1.13.2
    3.1.26.13    		 GO:0003676 ... Q72498 21275048 MOAD: Kd=5.5mM
    PDBbind: -logKd/Ki=2.26, Kd=5.5mM
    6875 3ao1:B (1.9) BS01 BZX 3.1.13.2
    3.1.26.13    		 GO:0003676 ... Q72498 21275048 MOAD: Kd=5.5mM
    PDBbind: -logKd/Ki=2.26, Kd=5.5mM
    6876 3ao1:B (1.9) BS02 BZX 3.1.13.2
    3.1.26.13    		 GO:0003676 ... Q72498 21275048 MOAD: Kd=5.5mM
    PDBbind: -logKd/Ki=2.26, Kd=5.5mM
    6877 3ao2:A (1.8) BS02 AVX 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 21275048 MOAD: Kd=0.17mM
    PDBbind: -logKd/Ki=3.77, Kd=0.17mM
    6878 3ao2:A (1.8) BS03 AVX 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 21275048 MOAD: Kd=0.17mM
    PDBbind: -logKd/Ki=3.77, Kd=0.17mM
    6879 3ao2:B (1.8) BS01 AVX 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 21275048 MOAD: Kd=0.17mM
    PDBbind: -logKd/Ki=3.77, Kd=0.17mM
    6880 3ao2:B (1.8) BS02 AVX 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 21275048 MOAD: Kd=0.17mM
    PDBbind: -logKd/Ki=3.77, Kd=0.17mM
    6881 3ao4:A (1.95) BS01 833 3.1.13.2
    3.1.26.13    		 GO:0003676 ... Q72498 21275048 MOAD: Kd=8.5mM
    PDBbind: -logKd/Ki=2.07, Kd=8.5mM
    6882 3ao4:A (1.95) BS02 833 3.1.13.2
    3.1.26.13    		 GO:0003676 ... Q72498 21275048 MOAD: Kd=8.5mM
    PDBbind: -logKd/Ki=2.07, Kd=8.5mM
    6883 3ao4:B (1.95) BS01 833 3.1.13.2
    3.1.26.13    		 GO:0003676 ... Q72498 21275048 MOAD: Kd=8.5mM
    PDBbind: -logKd/Ki=2.07, Kd=8.5mM
    6884 3ao4:B (1.95) BS02 833 3.1.13.2
    3.1.26.13    		 GO:0003676 ... Q72498 21275048 MOAD: Kd=8.5mM
    PDBbind: -logKd/Ki=2.07, Kd=8.5mM
    6885 3ao5:A (1.8) BS02 BBY 3.1.13.2
    3.1.26.13    		 GO:0003676 ... Q72498 21275048 MOAD: Kd=5.9mM
    PDBbind: -logKd/Ki=2.23, Kd=5.9mM
    6886 3ao5:A (1.8) BS03 BBY 3.1.13.2
    3.1.26.13    		 GO:0003676 ... Q72498 21275048 MOAD: Kd=5.9mM
    PDBbind: -logKd/Ki=2.23, Kd=5.9mM
    6887 3ao5:B (1.8) BS03 BBY 3.1.13.2
    3.1.26.13    		 GO:0003676 ... Q72498 21275048 MOAD: Kd=5.9mM
    PDBbind: -logKd/Ki=2.23, Kd=5.9mM
    6888 3ao5:B (1.8) BS04 BBY 3.1.13.2
    3.1.26.13    		 GO:0003676 ... Q72498 21275048 MOAD: Kd=5.9mM
    PDBbind: -logKd/Ki=2.23, Kd=5.9mM
    6889 3aox:A (1.75) BS01 EMH 2.7.10.1 GO:0004672 ... Q9UM73 21575866 MOAD: Kd=2.4nM
    PDBbind: -logKd/Ki=9.08, Ki=0.83nM
    BindingDB: IC50=1.9nM
    6890 3ap7:A (1.53) BS03 SIA ? GO:0030246 ... O00214 21288902 PDBbind: -logKd/Ki=3.00, Kd=0.99mM
    6891 3apc:A (2.544) BS01 MMD 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 21316229 PDBbind: -logKd/Ki=7.44, IC50=0.036uM
    BindingDB: IC50=36nM
    6892 3aqa:A (2.3) BS01 BYH ? N/A P25440 21513886 PDBbind: -logKd/Ki=4.55, Kd=28uM
    BindingDB: Kd=28000nM, IC50=28000nM
    6893 3aqt:A (2.5) BS01 RCO ? GO:0000976 ... Q8NR95 21559286 MOAD: Kd=0.19uM
    PDBbind: -logKd/Ki=6.72, Kd=0.19uM
    6894 3ara:A (1.7) BS01 MKH 3.6.1.23 GO:0000287 ... P33316 22404301 MOAD: ic50=0.32uM
    PDBbind: -logKd/Ki=6.49, IC50=0.32uM
    BindingDB: IC50=480nM
    6895 3ara:A (1.7) BS02 MKH 3.6.1.23 GO:0000287 ... P33316 22404301 MOAD: ic50=0.32uM
    PDBbind: -logKd/Ki=6.49, IC50=0.32uM
    BindingDB: IC50=480nM
    6896 3ara:C (1.7) BS01 MKH 3.6.1.23 GO:0000287 ... P33316 22404301 MOAD: ic50=0.32uM
    PDBbind: -logKd/Ki=6.49, IC50=0.32uM
    BindingDB: IC50=480nM
    6897 3ara:C (1.7) BS02 MKH 3.6.1.23 GO:0000287 ... P33316 22404301 MOAD: ic50=0.32uM
    PDBbind: -logKd/Ki=6.49, IC50=0.32uM
    BindingDB: IC50=480nM
    6898 3arb:A (2.7) BS01 FEE ? N/A P11609 21376639 PDBbind: -logKd/Ki=6.63, Kd=234nM
    6899 3arb:C (2.7) BS01 FEE ? N/A P01848 21376639 PDBbind: -logKd/Ki=6.63, Kd=234nM
    6900 3ard:A (3.01) BS01 3GH ? N/A P11609 21376639 PDBbind: -logKd/Ki=6.76, Kd=175nM
    6901 3ard:C (3.01) BS01 3GH ? N/A P01848 21376639 PDBbind: -logKd/Ki=6.76, Kd=175nM
    6902 3are:A (2.8) BS01 4GH ? N/A P11609 21376639 PDBbind: -logKd/Ki=6.21, Kd=617nM
    6903 3are:C (2.8) BS01 4GH ? N/A P01848 21376639 PDBbind: -logKd/Ki=6.21, Kd=617nM
    6904 3arf:A (2.9) BS01 DB3 ? N/A P11609 21376639 PDBbind: -logKd/Ki=7.19, Kd=64nM
    6905 3arf:C (2.9) BS01 DB3 ? N/A P01848 21376639 PDBbind: -logKd/Ki=7.19, Kd=64nM
    6906 3arg:A (3.0) BS01 DB6 ? N/A P11609 21376639 PDBbind: -logKd/Ki=7.26, Kd=55nM
    6907 3arg:C (3.0) BS01 DB6 ? N/A P01848 21376639 PDBbind: -logKd/Ki=7.26, Kd=55nM
    6908 3arn:A (1.8) BS01 MSJ 3.6.1.23 GO:0000287 ... P33316 22339362 MOAD: ic50=3.9uM
    PDBbind: -logKd/Ki=5.41, IC50=3.9uM
    BindingDB: IC50=9.48e+3nM
    6909 3arn:A (1.8) BS02 MSJ 3.6.1.23 GO:0000287 ... P33316 22339362 MOAD: ic50=3.9uM
    PDBbind: -logKd/Ki=5.41, IC50=3.9uM
    BindingDB: IC50=9.48e+3nM
    6910 3arn:C (1.8) BS01 MSJ 3.6.1.23 GO:0000287 ... P33316 22339362 MOAD: ic50=3.9uM
    PDBbind: -logKd/Ki=5.41, IC50=3.9uM
    BindingDB: IC50=9.48e+3nM
    6911 3arn:C (1.8) BS02 MSJ 3.6.1.23 GO:0000287 ... P33316 22339362 MOAD: ic50=3.9uM
    PDBbind: -logKd/Ki=5.41, IC50=3.9uM
    BindingDB: IC50=9.48e+3nM
    6912 3arp:A (1.55) BS01 DEQ 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=7.15, Kd=0.07uM
    6913 3arq:A (1.5) BS01 DM5 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=6.40, Kd=0.4uM
    6914 3arr:A (1.65) BS01 PNX 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=5.40, Kd=4.0uM
    6915 3arr:A (1.65) BS02 PNX 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=5.40, Kd=4.0uM
    6916 3art:A (2.23) BS01 DEQ 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=4.43, Kd=37uM
    6917 3art:A (2.23) BS02 DEQ 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=4.43, Kd=37uM
    6918 3art:A (2.23) BS03 DEQ 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=4.43, Kd=37uM
    6919 3aru:A (1.9) BS01 PNX 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=3.22, Kd=600uM
    6920 3aru:A (1.9) BS02 PNX 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=3.22, Kd=600uM
    6921 3aru:A (1.9) BS03 PNX 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=3.22, Kd=600uM
    6922 3arv:A (1.5) BS01 SAU 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=5.64, Kd=2.3uM
    6923 3arv:A (1.5) BS02 SAU 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=5.64, Kd=2.3uM
    6924 3arw:A (1.5) BS01 CTI 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=6.15, Kd=0.7uM
    6925 3arx:A (1.16) BS01 POY 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=5.33, Kd=4.7uM
    6926 3arx:A (1.16) BS02 POY 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=5.33, Kd=4.7uM
    6927 3ary:A (1.35) BS01 I5I 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=6.00, Kd=1.0uM
    6928 3ary:A (1.35) BS02 I5I 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=6.00, Kd=1.0uM
    6929 3arz:A (1.82) BS01 I5I 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=6.00, Kd=1.0uM
    6930 3arz:A (1.82) BS02 I5I 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=6.00, Kd=1.0uM
    6931 3as0:A (2.0) BS01 SAU 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=4.55, Kd=28uM
    6932 3as0:A (2.0) BS02 SAU 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=4.55, Kd=28uM
    6933 3as1:A (2.0) BS01 CTI 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=4.02, IC50=95uM
    6934 3as2:A (1.8) BS01 POY 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=3.44, IC50=360uM
    6935 3as2:A (1.8) BS02 POY 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=3.44, IC50=360uM
    6936 3as2:A (1.8) BS03 POY 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=3.44, IC50=360uM
    6937 3as3:A (2.4) BS01 I5I 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=3.80, IC50=160uM
    6938 3as3:A (2.4) BS02 I5I 3.2.1.14 GO:0004553 ... Q9AMP1 21531720 PDBbind: -logKd/Ki=3.80, IC50=160uM
    6939 3asx:A (2.0) BS01 D99 2.5.1.21 GO:0004310 ... P37268 21353782 MOAD: ic50=20nM
    PDBbind: -logKd/Ki=7.70, IC50=20nM
    6940 3at1:A (2.8) BS01 PCT 2.1.3.2 GO:0004070 ... P0A786 2405902 PDBbind: -logKd/Ki=3.18, Ki=0.66mM
    6941 3at3:A (2.6) BS01 ATK 2.7.11.1 GO:0004672 ... P68400 21735094 PDBbind: -logKd/Ki=8.04, IC50=9.2nM
    BindingDB: IC50=110nM
    6942 3at4:A (2.2) BS01 CCK 2.7.11.1 GO:0004672 ... P68400 21735094 MOAD: Kd=2.26nM
    PDBbind: -logKd/Ki=8.10, IC50=8.0nM
    6943 3ati:A (1.71) BS02 SZ4 3.4.21.4 GO:0004175 ... P00760 N/A PDBbind: -logKd/Ki=3.73, IC50=188uM
    6944 3atk:A (1.74) BS02 SZ1 3.4.21.4 GO:0004175 ... P00760 N/A PDBbind: -logKd/Ki=2.85, IC50=1400uM
    6945 3atm:A (1.72) BS02 TSS 3.4.21.4 GO:0004175 ... P00760 N/A PDBbind: -logKd/Ki=3.06, IC50=873uM
    6946 3atp:A (2.5) BS01 SER ? GO:0006935 ... P02942 21979954 PDBbind: -logKd/Ki=4.45, Kd=35.6uM
    6947 3atp:B (2.5) BS01 SER ? GO:0006935 ... P02942 21979954 PDBbind: -logKd/Ki=4.45, Kd=35.6uM
    6948 3atu:A (1.65) BS01 ADP ? GO:0005524 ... P0DMV8 21608060 PDBbind: -logKd/Ki=8.30, Kd=5.00nM
    6949 3atv:A (1.58) BS01 ADP ? GO:0005524 ... P0DMV8 21608060 PDBbind: -logKd/Ki=5.34, Kd=4610nM
    6950 3au6:A (3.3) BS02 DG3 2.7.7.7
    4.2.99.18    		 GO:0003677 ... Q5SJ64 22306405 PDBbind: -logKd/Ki=7.92, Kd=12nM
    6951 3axm:A (1.65) BS02 6PG 4.1.1.39 GO:0000166 ... P0C512 22609438 MOAD: Ki=8.5uM
    PDBbind: -logKd/Ki=5.07, Ki=8.5uM
    6952 3axm:B (1.65) BS02 6PG 4.1.1.39 GO:0000166 ... P0C512 22609438 MOAD: Ki=8.5uM
    PDBbind: -logKd/Ki=5.07, Ki=8.5uM
    6953 3axz:A (2.25) BS01 ADN 2.1.1.228 GO:0002939 ... P43912 21602303 MOAD: Kd=372uM
    PDBbind: -logKd/Ki=3.43, Kd=372uM
    6954 3ay0:A (3.05) BS02 ADN 2.1.1.228 GO:0002939 ... Q58293 21602303 PDBbind: -logKd/Ki=3.04, Kd=910uM
    6955 3ay9:A (1.75) BS01 ADP ? GO:0005524 ... P0DMV8 21608060 PDBbind: -logKd/Ki=8.34, Kd=4.55nM
    6956 3aya:A (2.0) BS01 GAL ? GO:0030246 ... P17931 21949831 PDBbind: -logKd/Ki=4.33, Kd=47uM
    6957 3ayc:B (1.8) BS01 GAL ? GO:0030246 ... P17931 21949831 PDBbind: -logKd/Ki=4.24, Kd=57uM
    6958 3ayd:A (1.9) BS01 GAL ? GO:0030246 ... P17931 21949831 PDBbind: -logKd/Ki=4.19, Kd=65uM
    6959 3az8:C (3.1) BS01 S21 4.2.1.59 GO:0006633 ... Q965D7 21843645 PDBbind: -logKd/Ki=6.00, Kd~1uM
    6960 3az8:D (3.1) BS01 S21 4.2.1.59 GO:0006633 ... Q965D7 21843645 PDBbind: -logKd/Ki=6.00, Kd~1uM
    6961 3az9:C (2.75) BS01 K91 4.2.1.59 GO:0006633 ... Q965D7 21843645 PDBbind: -logKd/Ki=6.00, Kd~1uM
    6962 3az9:C (2.75) BS02 K91 4.2.1.59 GO:0006633 ... Q965D7 21843645 PDBbind: -logKd/Ki=6.00, Kd~1uM
    6963 3az9:D (2.75) BS01 K91 4.2.1.59 GO:0006633 ... Q965D7 21843645 PDBbind: -logKd/Ki=6.00, Kd~1uM
    6964 3az9:D (2.75) BS02 K91 4.2.1.59 GO:0006633 ... Q965D7 21843645 PDBbind: -logKd/Ki=6.00, Kd~1uM
    6965 3aza:A (2.7) BS01 KM0 4.2.1.59 GO:0006633 ... Q965D7 21843645 PDBbind: -logKd/Ki=5.13, IC50=7.4uM
    6966 3aza:B (2.7) BS01 KM0 4.2.1.59 GO:0006633 ... Q965D7 21843645 PDBbind: -logKd/Ki=5.13, IC50=7.4uM
    6967 3azb:C (2.6) BS01 KM1 4.2.1.59 GO:0006633 ... Q965D7 21843645 PDBbind: -logKd/Ki=4.92, IC50=12uM
    6968 3azb:D (2.6) BS01 KM1 4.2.1.59 GO:0006633 ... Q965D7 21843645 PDBbind: -logKd/Ki=4.92, IC50=12uM
    6969 3b0w:A (2.2) BS01 DGX ? GO:0003677 ... P51449 21733845 PDBbind: -logKd/Ki=5.70, IC50=2uM
    BindingDB: IC50=2000nM, Kd=109nM
    6970 3b1m:A (1.6) BS02 KRC ? GO:0003677 ... P37231 21720019 MOAD: Ki=3.3nM
    PDBbind: -logKd/Ki=8.48, Ki=3.3nM
    6971 3b1t:A (2.5) BS01 YCL 3.5.3.15 GO:0004668 ... Q9UM07 21882827 PDBbind: -logKd/Ki=5.66, IC50=2.2uM
    6972 3b1u:A (2.1) BS01 YFF 3.5.3.15 GO:0004668 ... Q9UM07 21882827 PDBbind: -logKd/Ki=5.72, IC50=1.9uM
    6973 3b24:A (1.7) BS01 B2J 3.6.4.10 GO:0005524 ... P07900 21875802 MOAD: Kd=0.042mM
    PDBbind: -logKd/Ki=4.38, Kd=0.042mM
    BindingDB: Kd=42000nM
    6974 3b25:A (1.75) BS01 B2K 3.6.4.10 GO:0005524 ... P07900 21875802 MOAD: Kd=0.86uM
    PDBbind: -logKd/Ki=6.07, Kd=0.86uM
    BindingDB: Kd=8.6E2nM, IC50=9600nM
    6975 3b26:A (2.1) BS01 B2L 3.6.4.10 GO:0005524 ... P07900 21875802 MOAD: Kd=0.23uM
    PDBbind: -logKd/Ki=6.64, Kd=0.23uM
    BindingDB: IC50=6900nM, Kd=2.3E2nM
    6976 3b27:A (1.5) BS01 B2T 3.6.4.10 GO:0005524 ... P07900 21875802 MOAD: Kd=6.9uM
    PDBbind: -logKd/Ki=5.16, Kd=6.9uM
    BindingDB: IC50=750nM, Kd=6.9E3nM
    6977 3b28:A (1.35) BS01 B2X 3.6.4.10 GO:0005524 ... P07900 21875802 MOAD: Kd=0.0034uM
    PDBbind: -logKd/Ki=8.47, Kd=0.0034uM
    BindingDB: Kd=3.4nM, IC50=3000nM
    6978 3b2q:A (2.1) BS01 ATP 3.6.3.14 GO:0005524 ... Q60187 19003877 PDBbind: -logKd/Ki=4.55, Kd=28uM
    6979 3b2q:B (2.1) BS01 ATP 3.6.3.14 GO:0005524 ... Q60187 19003877 PDBbind: -logKd/Ki=4.55, Kd=28uM
    6980 3b2t:A (1.8) BS01 M33 2.7.10.1 GO:0004672 ... P21802 18056630 PDBbind: -logKd/Ki=5.21, Kd=6.21uM
    6981 3b2t:B (1.8) BS01 M33 2.7.10.1 GO:0004672 ... P21802 18056630 PDBbind: -logKd/Ki=5.21, Kd=6.21uM
    6982 3b2w:A (2.3) BS01 9NH 2.7.10.2 GO:0004672 ... P06239 18083554 MOAD: ic50=0.6nM
    PDBbind: -logKd/Ki=9.22, IC50=0.6nM
    6983 3b3c:A (1.46) BS03 PLU 3.4.11.10 GO:0006508 ... Q01693 18576673 MOAD: Ki=105uM
    PDBbind: -logKd/Ki=3.98, Ki=105uM
    6984 3b3s:A (1.18) BS03 LEU 3.4.11.10 GO:0006508 ... Q01693 18576673 PDBbind: -logKd/Ki=2.55, Ki=2800uM
    6985 3b3w:A (1.75) BS03 LEU 3.4.11.10 GO:0006508 ... Q01693 18576673 PDBbind: -logKd/Ki=4.19, Ki=65uM
    6986 3b3x:A (2.5) BS01 A33 3.5.2.6 GO:0005886 ... P00808 18515103 PDBbind: -logKd/Ki=3.60, Ki=250uM
    6987 3b4f:A (1.89) BS02 TUO 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 18024029 MOAD: Ki=7.2nM
    PDBbind: -logKd/Ki=8.14, Ki=7.2nM
    BindingDB: Ki=7.2nM
    6988 3b4p:A (1.7) BS01 3B4 ? GO:0017000 ... Q396C9 19053436 MOAD: Kd=4uM
    PDBbind: -logKd/Ki=5.40, Kd=4.0uM
    6989 3b4p:B (1.7) BS01 3B4 ? GO:0017000 ... Q396C9 19053436 MOAD: Kd=4uM
    PDBbind: -logKd/Ki=5.40, Kd=4.0uM
    6990 3b50:A (1.4) BS01 SLB ? GO:0030288 ... P44542 17947229 MOAD: Kd=28nM
    PDBbind: -logKd/Ki=7.55, Kd=28nM
    6991 3b5j:A (2.0) BS01 12D ? GO:0005524 ... P08716 18155559 MOAD: Kd=2.1uM
    PDBbind: -logKd/Ki=5.68, Kd=2.1uM
    6992 3b5r:A (1.8) BS01 B5R ? N/A P10275 18805694 PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    BindingDB: Ki=1.7nM
    6993 3b65:A (1.8) BS01 3B6 ? N/A P10275 18805694 PDBbind: -logKd/Ki=9.27, Ki=0.54nM
    6994 3b66:A (1.65) BS01 B66 ? N/A P10275 18805694 PDBbind: -logKd/Ki=8.60, Ki=2.5nM
    6995 3b67:A (1.9) BS01 B67 ? N/A P10275 18805694 PDBbind: -logKd/Ki=8.85, Ki=1.4nM
    6996 3b68:A (1.9) BS01 B68 ? N/A P10275 18805694 PDBbind: -logKd/Ki=8.40, Ki=4nM
    BindingDB: Ki=4nM
    6997 3b7i:A (1.75) BS03 PLU 3.4.11.10 GO:0006508 ... Q01693 18576673 MOAD: Ki=1.5uM
    PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    6998 3b7j:A (2.4) BS01 JUG 4.2.1.59 GO:0005737 ... Q5G940 18565285 PDBbind: -logKd/Ki=5.17, Ki=6.8uM
    6999 3b7r:L (1.811) BS02 BIR 3.3.2.6
    3.4.11.4    		 GO:0003723 ... P09960 18804029 MOAD: Ki=20nM
    PDBbind: -logKd/Ki=7.70, Ki=20nM
    7000 3b7u:X (1.9) BS02 KEL 3.3.2.6
    3.4.11.4    		 GO:0003723 ... P09960 18804029 PDBbind: -logKd/Ki=7.74, Ki=18nM
    BindingDB: IC50=5nM, Ki=10nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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