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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    6601 2yir:A (2.1) BS01 YIR 2.7.11.1 GO:0004672 ... O96017 21907711 MOAD: ic50=0.17nM
    PDBbind: -logKd/Ki=9.77, IC50=0.17nM
    6602 2yis:A (2.0) BS01 YIS 2.7.11.24 GO:0000077 ... Q16539 21888439 PDBbind: -logKd/Ki=8.77, IC50=1.7nM
    BindingDB: Kd=0.001000nM
    6603 2yit:A (2.2) BS01 YIT 2.7.11.1 GO:0004672 ... O96017 21907711 MOAD: ic50=0.29nM
    PDBbind: -logKd/Ki=9.54, IC50=0.29nM
    6604 2yiu:A (2.7) BS03 SMA 1.10.2.2 GO:0005886 ... P05418 21996020 PDBbind: -logKd/Ki=6.89, IC50=130nM
    6605 2yiu:D (2.7) BS03 SMA 1.10.2.2 GO:0005886 ... P05418 21996020 PDBbind: -logKd/Ki=6.89, IC50=130nM
    6606 2yiu:F (2.7) BS01 SMA 7.1.1.8 GO:0005886 ... P05417 21996020 PDBbind: -logKd/Ki=6.89, IC50=130nM
    6607 2yiv:X (1.28) BS06 NBN 1.2.7.4 GO:0003824 ... Q9F8A8 21904889 PDBbind: -logKd/Ki=2.78, Ki=1.66mM
    6608 2yiw:A (2.0) BS01 YIW 2.7.11.24 GO:0000077 ... Q16539 21888439 PDBbind: -logKd/Ki=9.10, IC50=0.8nM
    BindingDB: Kd=0.400000nM
    6609 2yix:A (2.3) BS01 YIX 2.7.11.24 GO:0000077 ... Q16539 21888439 MOAD: Kd=3.3nM
    PDBbind: -logKd/Ki=8.48, Kd=3.3nM
    BindingDB: Kd=3.3nM, IC50=58nM
    6610 2yj2:A (1.15) BS01 YJ2 3.4.22.15 GO:0006508 ... P07711 21898833 PDBbind: -logKd/Ki=7.92, IC50=0.012uM
    6611 2yj8:A (1.3) BS01 YJ8 3.4.22.15 GO:0006508 ... P07711 21898833 PDBbind: -logKd/Ki=8.19, IC50=0.0065uM
    6612 2yj9:A (1.35) BS01 YJ9 3.4.22.15 GO:0006508 ... P07711 21898833 PDBbind: -logKd/Ki=7.02, IC50=0.095uM
    6613 2yjb:A (1.4) BS01 YJ9 3.4.22.15 GO:0006508 ... P07711 21898833 PDBbind: -logKd/Ki=7.02, IC50=0.095uM
    6614 2yjc:A (1.14) BS01 424 3.4.22.15 GO:0006508 ... P07711 21898833 PDBbind: -logKd/Ki=7.66, IC50=0.022uM
    6615 2yjq:A (2.25) BS01 BGC 3.2.1.151'
    '3.2.1.4    		 N/A Q1A2D0 21795708 PDBbind: -logKd/Ki=5.28, Ki=5.2uM
    6616 2yjq:A (2.25) BS02 BGC 3.2.1.151'
    '3.2.1.4    		 N/A Q1A2D0 21795708 PDBbind: -logKd/Ki=5.28, Ki=5.2uM
    6617 2yjq:A (2.25) BS03 OXZ 3.2.1.151'
    '3.2.1.4    		 N/A Q1A2D0 21795708 PDBbind: -logKd/Ki=5.28, Ki=5.2uM
    6618 2yjw:A (1.61) BS01 YJW 3.6.4.10 GO:0005524 ... P07900 21972823 PDBbind: -logKd/Ki=5.12, IC50=7.6uM
    6619 2yjx:A (1.83) BS01 YJX 3.6.4.10 GO:0005524 ... P07900 21972823 PDBbind: -logKd/Ki=5.12, IC50=7.6uM
    6620 2yk1:H (1.85) BS01 NCT N/A N/A N/A 22079050 MOAD: Kd=7.4nM
    PDBbind: -logKd/Ki=8.13, Kd=7.4nM
    6621 2yk1:L (1.85) BS01 NCT N/A N/A N/A 22079050 PDBbind: -logKd/Ki=8.13, Kd=7.4nM
    6622 2yk9:A (1.32) BS01 YK9 3.6.4.10 GO:0005524 ... P07900 21972823 PDBbind: -logKd/Ki=5.09, IC50=8.1uM
    6623 2ykb:A (1.93) BS01 YKB 3.6.4.10 GO:0005524 ... P07900 21972823 PDBbind: -logKd/Ki=5.96, IC50=1.1uM
    6624 2ykc:A (1.67) BS01 YKC 3.6.4.10 GO:0005524 ... P07900 21972823 PDBbind: -logKd/Ki=6.11, IC50=0.78uM
    6625 2yke:A (1.43) BS01 YKE 3.6.4.10 GO:0005524 ... P07900 21972823 PDBbind: -logKd/Ki=5.96, IC50=1.1uM
    6626 2yki:A (1.67) BS01 YKI 3.6.4.10 GO:0005524 ... P07900 21972823 MOAD: Kd=0.35nM
    PDBbind: -logKd/Ki=9.46, Kd=0.35nM
    6627 2ykj:A (1.46) BS01 YKJ 3.6.4.10 GO:0005524 ... P07900 21972823 PDBbind: -logKd/Ki=6.21, IC50=0.61uM
    6628 2ylc:A (1.3) BS01 U ? GO:0003723 ... P0A1R0 21737752 PDBbind: -logKd/Ki=7.89, Kd=13nM
    6629 2yln:A (1.12) BS01 CYS ? N/A Q5F9M1 22138345 MOAD: Kd=0.021uM
    PDBbind: -logKd/Ki=7.68, Kd=0.021uM
    6630 2yln:A (1.12) BS02 CYS ? N/A Q5F9M1 22138345 MOAD: Kd=0.021uM
    PDBbind: -logKd/Ki=7.68, Kd=0.021uM
    6631 2ylo:A (2.5) BS02 YLO ? N/A P10275 22047606 PDBbind: -logKd/Ki=4.88, IC50=13.1uM
    BindingDB: IC50=13100nM
    6632 2ylp:A (2.3) BS02 056 ? N/A P10275 22047606 PDBbind: -logKd/Ki=4.30, IC50~50uM
    6633 2ylp:A (2.3) BS03 056 ? N/A P10275 22047606 PDBbind: -logKd/Ki=4.30, IC50~50uM
    6634 2ylq:A (2.4) BS02 YLQ ? N/A P10275 22047606 PDBbind: -logKd/Ki=4.30, IC50~50uM
    BindingDB: IC50=>10000nM
    6635 2ym3:A (2.007) BS01 YM3 2.7.11.1 GO:0000077 ... O14757 22111927 MOAD: ic50=1.2uM
    PDBbind: -logKd/Ki=6.00, IC50=1.0uM
    BindingDB: IC50=1200nM
    6636 2ym4:A (2.35) BS01 4YM 2.7.11.1 GO:0000077 ... O14757 22111927 MOAD: ic50=1.5uM
    PDBbind: -logKd/Ki=5.82, IC50=1.5uM
    BindingDB: IC50=1500nM
    6637 2ym5:A (2.03) BS01 YM5 2.7.11.1 GO:0000077 ... O14757 22111927 MOAD: ic50=0.43uM
    PDBbind: -logKd/Ki=6.37, IC50=0.43uM
    BindingDB: IC50=430nM
    6638 2ym6:A (2.01) BS01 YM6 2.7.11.1 GO:0000077 ... O14757 22111927 MOAD: ic50=0.88uM
    PDBbind: -logKd/Ki=6.06, IC50=0.88uM
    BindingDB: IC50=880nM
    6639 2ym7:A (1.81) BS01 YM7 2.7.11.1 GO:0000077 ... O14757 22111927 MOAD: ic50=0.13uM
    PDBbind: -logKd/Ki=6.89, IC50=0.13uM
    BindingDB: IC50=130nM
    6640 2ym7:A (1.81) BS02 YM7 2.7.11.1 GO:0000077 ... O14757 22111927 MOAD: ic50=0.13uM
    PDBbind: -logKd/Ki=6.89, IC50=0.13uM
    BindingDB: IC50=130nM
    6641 2ym8:A (2.07) BS01 YM8 2.7.11.1 GO:0000077 ... O14757 22111927 MOAD: ic50=0.013uM
    PDBbind: -logKd/Ki=7.89, IC50=13nM
    BindingDB: IC50=13nM
    6642 2ymd:A (1.96) BS01 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    PDBbind: -logKd/Ki=3.16, Kd=693uM
    6643 2ymd:A (1.96) BS02 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    PDBbind: -logKd/Ki=3.16, Kd=693uM
    6644 2ymd:B (1.96) BS01 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    PDBbind: -logKd/Ki=3.16, Kd=693uM
    6645 2ymd:B (1.96) BS02 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    PDBbind: -logKd/Ki=3.16, Kd=693uM
    6646 2yme:F (2.4) BS01 CWB ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=343uM
    PDBbind: -logKd/Ki=7.66, Kd=22nM
    6647 2yme:G (2.4) BS01 CWB ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=343uM
    PDBbind: -logKd/Ki=7.66, Kd=22nM
    6648 2yme:G (2.4) BS02 CWB ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=343uM
    PDBbind: -logKd/Ki=7.66, Kd=22nM
    6649 2ynd:A (1.89) BS02 646 2.3.1.97 GO:0004379 ... A5K1A2 24451586 MOAD: Ki=32nM
    PDBbind: -logKd/Ki=7.49, Ki=32nM
    6650 2yne:A (1.72) BS02 YNE 2.3.1.97 GO:0004379 ... A5K1A2 24451586 MOAD: Ki=2.7nM
    PDBbind: -logKd/Ki=8.57, Ki=2.7nM
    6651 2yof:A (1.82) BS01 74W 2.7.4.8
    2.7.4.9    		 GO:0004385 ... Q8I4S1 23240776 MOAD: Ki=25uM
    PDBbind: -logKd/Ki=4.60, Ki=25uM
    BindingDB: Ki=25000nM
    6652 2yog:A (1.5) BS01 74X 2.7.4.8
    2.7.4.9    		 GO:0004385 ... Q8I4S1 23240776 MOAD: Ki=31uM
    PDBbind: -logKd/Ki=4.51, Ki=31uM
    BindingDB: Ki=31000nM
    6653 2yoh:A (1.6) BS01 WMJ 2.7.4.8
    2.7.4.9    		 GO:0004385 ... Q8I4S1 23240776 MOAD: Ki=11uM
    PDBbind: -logKd/Ki=4.96, Ki=11uM
    BindingDB: Ki=11000nM
    6654 2yoj:A (1.76) BS01 8Y6 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 24900812 MOAD: ic50=5nM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    6655 2yol:A (3.2) BS01 EBN 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P06935 23307694 PDBbind: -logKd/Ki=6.89, Ki=0.13uM
    BindingDB: Ki=130nM
    6656 2ypf:A (2.55) BS01 dna ? N/A Q3ZD73 23999294 PDBbind: Kd=78nM
    6657 2ypi:A (2.5) BS01 PGA 5.3.1.1 GO:0004807 ... P00942 2204418 MOAD: Ki=15uM
    PDBbind: -logKd/Ki=4.82, Ki=15uM
    6658 2ypi:B (2.5) BS01 PGA 5.3.1.1 GO:0004807 ... P00942 2204418 MOAD: Ki=15uM
    PDBbind: -logKd/Ki=4.82, Ki=15uM
    6659 2ypo:A (2.0) BS02 PHE 2.5.1.54 GO:0003849 ... O53512 23274137 MOAD: Kd=21uM
    PDBbind: -logKd/Ki=4.68, Kd=21uM
    6660 2ypo:B (2.0) BS01 PHE 2.5.1.54 GO:0003849 ... O53512 23274137 MOAD: Kd=21uM
    PDBbind: -logKd/Ki=4.68, Kd=21uM
    6661 2ypo:B (2.0) BS03 PHE 2.5.1.54 GO:0003849 ... O53512 23274137 MOAD: Kd=21uM
    PDBbind: -logKd/Ki=4.68, Kd=21uM
    6662 2ypp:A (2.3) BS01 TYR 2.5.1.54 GO:0003849 ... O53512 23274137 MOAD: Kd=39uM
    PDBbind: -logKd/Ki=4.41, Kd=39uM
    6663 2ypp:A (2.3) BS03 TYR 2.5.1.54 GO:0003849 ... O53512 23274137 MOAD: Kd=39uM
    PDBbind: -logKd/Ki=4.41, Kd=39uM
    6664 2ypp:B (2.3) BS01 TYR 2.5.1.54 GO:0003849 ... O53512 23274137 MOAD: Kd=39uM
    PDBbind: -logKd/Ki=4.41, Kd=39uM
    6665 2ypp:B (2.3) BS03 TYR 2.5.1.54 GO:0003849 ... O53512 23274137 MOAD: Kd=39uM
    PDBbind: -logKd/Ki=4.41, Kd=39uM
    6666 2ypp:B (2.3) BS04 TYR 2.5.1.54 GO:0003849 ... O53512 23274137 MOAD: Kd=39uM
    PDBbind: -logKd/Ki=4.41, Kd=39uM
    6667 2ywp:A (2.9) BS01 A42 2.7.11.1 GO:0000077 ... O14757 16446090 PDBbind: -logKd/Ki=8.15, IC50=7nM
    BindingDB: IC50=7nM
    6668 2yxj:A (2.2) BS01 N3C ? GO:0042981 ... Q07817 17572662 MOAD: ic50=9nM
    PDBbind: -logKd/Ki=9.30, Ki=0.5nM
    BindingDB: Ki=<1.000000nM, IC50=6nM, Kd=0.37nM, EC50=30nM
    6669 2yz3:A (2.3) BS03 M5P 3.5.2.6 N/A Q7BJM5 18052313 MOAD: Ki=220nM
    PDBbind: -logKd/Ki=6.66, Ki=220nM
    6670 2z1w:A (1.63) BS02 BDI 2.4.2.29 GO:0002099 ... P28720 17949745 PDBbind: -logKd/Ki=4.08, Ki=83uM
    6671 2z3h:A (1.5) BS02 BLO 3.5.4.23 GO:0003824 ... P0C2P0 17959604 PDBbind: -logKd/Ki=4.64, Ki=23uM
    6672 2z3h:B (1.5) BS01 BLO 3.5.4.23 GO:0003824 ... P0C2P0 17959604 PDBbind: -logKd/Ki=4.64, Ki=23uM
    6673 2z3h:B (1.5) BS03 BLO 3.5.4.23 GO:0003824 ... P0C2P0 17959604 PDBbind: -logKd/Ki=4.64, Ki=23uM
    6674 2z3h:C (1.5) BS02 BLO 3.5.4.23 GO:0003824 ... P0C2P0 17959604 PDBbind: -logKd/Ki=4.64, Ki=23uM
    6675 2z3h:D (1.5) BS02 BLO 3.5.4.23 GO:0003824 ... P0C2P0 17959604 PDBbind: -logKd/Ki=4.64, Ki=23uM
    6676 2z3z:A (1.95) BS01 AIO 3.4.14.12 GO:0004177 ... Q7MUW6 18042490 PDBbind: -logKd/Ki=4.31, Ki=48.8uM
    6677 2z4b:A (2.34) BS01 DC8 ? GO:0003677 ... Q92731 17614275 MOAD: Ki=0.44nM
    PDBbind: -logKd/Ki=9.36, Ki=0.44nM
    BindingDB: Ki=0.44nM
    6678 2z4o:A (1.6) BS01 065 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 17696515 PDBbind: -logKd/Ki=9.57, Ki=0.27nM
    6679 2z4o:B (1.6) BS01 065 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 17696515 MOAD: Ki=0.27nM
    PDBbind: -logKd/Ki=9.57, Ki=0.27nM
    6680 2z4r:A (3.05) BS02 ADP ? GO:0003677 ... P46798 18216012 PDBbind: -logKd/Ki=7.62, Kd=24nM
    6681 2z4w:A (2.45) BS03 749 2.5.1.-
    2.5.1.1
    2.5.1.10
    2.5.1.29    		 GO:0004161 ... Q12051 18800762 MOAD: ic50=0.98uM
    PDBbind: -logKd/Ki=6.01, IC50=0.98uM
    6682 2z4w:B (2.45) BS03 749 2.5.1.-
    2.5.1.1
    2.5.1.10
    2.5.1.29    		 GO:0004161 ... Q12051 18800762 MOAD: ic50=0.98uM
    PDBbind: -logKd/Ki=6.01, IC50=0.98uM
    6683 2z4y:A (2.1) BS01 252 2.5.1.-
    2.5.1.1
    2.5.1.10
    2.5.1.29    		 GO:0004161 ... Q12051 18800762 MOAD: ic50=0.71uM
    PDBbind: -logKd/Ki=6.15, IC50=0.71uM
    6684 2z4y:A (2.1) BS02 252 2.5.1.-
    2.5.1.1
    2.5.1.10
    2.5.1.29    		 GO:0004161 ... Q12051 18800762 MOAD: ic50=0.71uM
    PDBbind: -logKd/Ki=6.15, IC50=0.71uM
    6685 2z4y:B (2.1) BS01 252 2.5.1.-
    2.5.1.1
    2.5.1.10
    2.5.1.29    		 GO:0004161 ... Q12051 18800762 MOAD: ic50=0.71uM
    PDBbind: -logKd/Ki=6.15, IC50=0.71uM
    6686 2z4z:A (2.09) BS01 SC0 2.5.1.-
    2.5.1.1
    2.5.1.10
    2.5.1.29    		 GO:0004161 ... Q12051 18800762 MOAD: ic50=1.86uM
    PDBbind: -logKd/Ki=5.73, IC50=1.86uM
    6687 2z4z:B (2.09) BS01 SC0 2.5.1.-
    2.5.1.1
    2.5.1.10
    2.5.1.29    		 GO:0004161 ... Q12051 18800762 MOAD: ic50=1.86uM
    PDBbind: -logKd/Ki=5.73, IC50=1.86uM
    6688 2z50:A (2.01) BS01 028 2.5.1.-
    2.5.1.1
    2.5.1.10
    2.5.1.29    		 GO:0004161 ... Q12051 18800762 MOAD: ic50=11.22uM
    PDBbind: -logKd/Ki=4.95, IC50=11.22uM
    6689 2z50:B (2.01) BS01 028 2.5.1.-
    2.5.1.1
    2.5.1.10
    2.5.1.29    		 GO:0004161 ... Q12051 18800762 MOAD: ic50=11.22uM
    PDBbind: -logKd/Ki=4.95, IC50=11.22uM
    6690 2z52:A (2.13) BS03 H23 2.5.1.-
    2.5.1.1
    2.5.1.10
    2.5.1.29    		 GO:0004161 ... Q12051 18800762 PDBbind: -logKd/Ki=5.57, IC50=2.69uM
    6691 2z52:B (2.13) BS03 H23 2.5.1.-
    2.5.1.1
    2.5.1.10
    2.5.1.29    		 GO:0004161 ... Q12051 18800762 MOAD: ic50=2.69uM
    PDBbind: -logKd/Ki=5.57, IC50=2.69uM
    6692 2z60:A (1.95) BS01 P3Y 2.7.10.2 GO:0004672 ... P00520 17718712 PDBbind: -logKd/Ki=8.05, IC50=9nM
    6693 2z78:A (2.1) BS01 H86 2.5.1.-
    2.5.1.1
    2.5.1.10
    2.5.1.29    		 GO:0004161 ... Q12051 18800762 PDBbind: -logKd/Ki=6.12, IC50=0.76uM
    6694 2z78:B (2.1) BS01 H86 2.5.1.-
    2.5.1.1
    2.5.1.10
    2.5.1.29    		 GO:0004161 ... Q12051 18800762 PDBbind: -logKd/Ki=6.12, IC50=0.76uM
    6695 2z7g:A (2.52) BS02 EH9 3.5.4.4 GO:0004000 ... P56658 18549808 PDBbind: -logKd/Ki=8.95, Ki=1.13nM
    BindingDB: Ki=0.82nM
    6696 2z7h:A (2.08) BS02 GG3 2.5.1.-
    2.5.1.1
    2.5.1.10
    2.5.1.29    		 GO:0004161 ... Q12051 18442135 MOAD: Ki=115nM
    PDBbind: -logKd/Ki=6.94, Ki=115nM
    6697 2z7i:A (2.1) BS02 742 2.5.1.-
    2.5.1.1
    2.5.1.10
    2.5.1.29    		 GO:0004161 ... Q12051 18800762 MOAD: ic50=0.1uM
    PDBbind: -logKd/Ki=7.00, IC50=0.10uM
    6698 2z7r:A (2.0) BS01 STU 2.7.11.1 GO:0004672 ... Q15418 17965187 MOAD: ic50~0.4nM
    PDBbind: -logKd/Ki=9.52, IC50=0.3nM
    6699 2z92:A (2.3) BS01 ENE N/A N/A N/A 18463096 MOAD: Kd=0.8nM
    PDBbind: -logKd/Ki=9.10, Kd=0.8nM
    6700 2z92:B (2.3) BS01 ENE N/A N/A N/A 18463096 PDBbind: -logKd/Ki=9.10, Kd=0.8nM
    6701 2z94:A (1.78) BS02 TLD 2.1.1.-
    2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0C6X7 17981158 PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    BindingDB: Ki=1400nM
    6702 2z97:A (1.8) BS01 7HE 1.14.15.1 GO:0004497 ... P00183 19133773 PDBbind: -logKd/Ki=6.00, Kd=1.0uM
    6703 2za0:A (1.7) BS03 MGI 4.4.1.5 GO:0004462 ... Q9CPU0 18695250 MOAD: Ki=0.23uM
    PDBbind: -logKd/Ki=6.64, Ki=0.23uM
    6704 2za0:A (1.7) BS04 MGI 4.4.1.5 GO:0004462 ... Q9CPU0 18695250 MOAD: Ki=0.23uM
    PDBbind: -logKd/Ki=6.64, Ki=0.23uM
    6705 2za0:B (1.7) BS03 MGI 4.4.1.5 GO:0004462 ... Q9CPU0 18695250 PDBbind: -logKd/Ki=6.64, Ki=0.23uM
    6706 2za0:B (1.7) BS04 MGI 4.4.1.5 GO:0004462 ... Q9CPU0 18695250 PDBbind: -logKd/Ki=6.64, Ki=0.23uM
    6707 2za3:A (2.65) BS01 U5P 4.1.1.23 GO:0004590 ... Q8T6J6 17981823 PDBbind: -logKd/Ki=3.68, Ki=210uM
    6708 2za3:A (2.65) BS02 U5P 4.1.1.23 GO:0004590 ... Q8T6J6 17981823 PDBbind: -logKd/Ki=3.68, Ki=210uM
    6709 2za3:B (2.65) BS01 U5P 4.1.1.23 GO:0004590 ... Q8T6J6 17981823 PDBbind: -logKd/Ki=3.68, Ki=210uM
    6710 2za5:A (2.3) BS01 2FF 3.4.21.59 GO:0004252 ... P20231 18272363 MOAD: Ki=3.7nM
    PDBbind: -logKd/Ki=8.43, Ki=3.7nM
    6711 2za5:C (2.3) BS01 2FF 3.4.21.59 GO:0004252 ... P20231 18272363 MOAD: Ki=3.7nM
    PDBbind: -logKd/Ki=8.43, Ki=3.7nM
    6712 2zas:A (2.0) BS01 1OH ? N/A P62508 18582436 MOAD: ic50=13.9nM
    PDBbind: -logKd/Ki=7.86, IC50=13.9nM
    BindingDB: IC50=13.9nM
    6713 2zaz:A (1.8) BS01 GK1 2.7.11.24 GO:0000077 ... Q16539 18006306 MOAD: Ki=0.4uM
    PDBbind: -logKd/Ki=6.40, Ki=0.4uM
    BindingDB: Ki=400nM, IC50=2500nM
    6714 2zb0:A (2.1) BS01 GK3 2.7.11.24 GO:0000077 ... Q16539 18006306 MOAD: Ki=0.24uM
    PDBbind: -logKd/Ki=6.62, Ki=0.24uM
    BindingDB: Ki=240nM, IC50=1500nM
    6715 2zb1:A (2.5) BS01 GK4 2.7.11.24 GO:0000077 ... Q16539 18006306 MOAD: Ki=0.48uM
    PDBbind: -logKd/Ki=6.32, Kd=0.48uM
    BindingDB: IC50=3000nM, Ki=480nM
    6716 2zbk:B (3.56) BS01 RDC 5.6.2.2 GO:0003676 ... O05207 18334211 PDBbind: -logKd/Ki=5.70, Kd=2uM
    6717 2zc9:H (1.58) BS03 22U 3.4.21.5 GO:0004252 ... P00734 19520086 MOAD: Ki=180nM
    PDBbind: -logKd/Ki=6.74, Ki=180nM
    BindingDB: Ki=250nM
    6718 2zcq:A (2.38) BS01 B65 2.5.1.96 GO:0003824 ... A9JQL9 18276850 MOAD: Ki=1.5nM
    PDBbind: -logKd/Ki=8.82, Ki=1.5nM
    6719 2zcr:A (1.92) BS01 B69 2.5.1.96 GO:0003824 ... A9JQL9 18276850 MOAD: Ki=135nM
    PDBbind: -logKd/Ki=6.87, Ki=135nM
    6720 2zcs:A (2.03) BS01 B70 2.5.1.96 GO:0003824 ... A9JQL9 18276850 MOAD: Ki=6nM
    PDBbind: -logKd/Ki=8.22, Ki=6nM
    6721 2zda:H (1.73) BS03 32U 3.4.21.5 GO:0004252 ... P00734 19520086 PDBbind: -logKd/Ki=8.40, Ki=4nM
    6722 2zdk:A (1.67) BS02 50U 3.4.21.4 GO:0004175 ... P00760 21111747 PDBbind: -logKd/Ki=6.37, Kd=428nM
    6723 2zdl:A (1.8) BS02 45U 3.4.21.4 GO:0004175 ... P00760 21111747 PDBbind: -logKd/Ki=6.40, Kd=402nM
    6724 2zdm:A (1.93) BS02 46U 3.4.21.4 GO:0004175 ... P00760 21111747 PDBbind: -logKd/Ki=6.41, Kd=386nM
    6725 2zdn:A (1.98) BS02 49U 3.4.21.4 GO:0004175 ... P00760 21111747 PDBbind: -logKd/Ki=6.25, Kd=562nM
    6726 2zdt:A (2.0) BS01 46C 2.7.11.24 GO:0004672 ... P53779 18313930 PDBbind: -logKd/Ki=8.02, IC50=9.6nM
    6727 2zdx:A (2.54) BS01 P4A 2.7.11.2 GO:0004672 ... Q16654 21904029 PDBbind: -logKd/Ki=3.19, IC50=648uM
    6728 2zdz:A (2.0) BS01 310 3.4.23.46 GO:0004190 ... P56817 18162398 MOAD: ic50=0.7uM
    PDBbind: -logKd/Ki=6.15, IC50=0.7uM
    BindingDB: IC50=700nM
    6729 2ze1:A (2.2) BS01 411 3.4.23.46 GO:0004190 ... P56817 18162398 MOAD: ic50=0.6uM
    PDBbind: -logKd/Ki=6.22, IC50=0.6uM
    BindingDB: IC50=600nM
    6730 2zfp:H (2.25) BS03 19U 3.4.21.5 GO:0004252 ... P00734 19520086 MOAD: Ki=6.8uM
    PDBbind: -logKd/Ki=5.17, Ki=6.8uM
    BindingDB: Ki=13000nM
    6731 2zfs:A (1.51) BS02 12U 3.4.21.4 GO:0004175 ... P00760 21111747 PDBbind: -logKd/Ki=6.54, Kd=287nM
    6732 2zft:A (1.76) BS02 10U 3.4.21.4 GO:0004175 ... P00760 21111747 PDBbind: -logKd/Ki=6.52, Kd=300nM
    6733 2zg1:A (2.7) BS01 SIA ? N/A O15389 18022638 PDBbind: -logKd/Ki=2.10, Kd=8.0mM
    6734 2zg3:A (3.0) BS01 SIA ? N/A O15389 18022638 PDBbind: -logKd/Ki=2.06, Kd=8.7mM
    6735 2zga:A (1.65) BS01 YDP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 21762812 MOAD: Ki=0.48uM
    PDBbind: -logKd/Ki=6.32, Ki=0.48uM
    6736 2zgx:H (1.8) BS03 29U 3.4.21.5 GO:0004252 ... P00734 19520086 MOAD: Ki=180nM
    PDBbind: -logKd/Ki=6.74, Ki=180nM
    BindingDB: Ki=180nM, Kd=110nM
    6737 2zhd:A (1.94) BS02 12U 3.4.21.4 GO:0004175 ... P00760 21111747 PDBbind: -logKd/Ki=6.54, Kd=287nM
    6738 2zi0:A (2.82) BS01 rna ? N/A Q8UYT3 18600235 PDBbind: Kd=75nM
    6739 2zi0:A (2.82) BS02 rna ? N/A Q8UYT3 18600235 PDBbind: Kd=75nM
    6740 2zi0:B (2.82) BS01 rna ? N/A Q8UYT3 18600235 PDBbind: Kd=75nM
    6741 2zi0:B (2.82) BS02 rna ? N/A Q8UYT3 18600235 PDBbind: Kd=75nM
    6742 2zif:A (2.4) BS01 SAM 2.1.1.-
    2.1.1.113    		 GO:0003677 ... Q5SL84 18618709 MOAD: Kd=43uM
    PDBbind: -logKd/Ki=4.37, Kd=43uM
    6743 2zir:B (2.4) BS03 NH7 2.5.1.58 GO:0003824 ... Q02293 19217288 MOAD: ic50=6.4nM
    PDBbind: -logKd/Ki=8.19, IC50=6.4nM
    6744 2zis:B (2.6) BS03 NH8 2.5.1.58 GO:0003824 ... Q02293 19217288 PDBbind: -logKd/Ki=8.55, IC50=2.8nM
    6745 2zjf:A (2.4) BS01 BSU 3.3.2.10 GO:0003824 ... P95276 18585390 MOAD: ic50=19nM
    PDBbind: -logKd/Ki=7.72, IC50=19nM
    BindingDB: IC50=19nM
    6746 2zju:A (2.58) BS01 IM4 ? GO:0004888 ... P58154 18338186 PDBbind: -logKd/Ki=5.81, Kd=1.557uM
    BindingDB: Ki=970nM
    6747 2zju:A (2.58) BS02 IM4 ? GO:0004888 ... P58154 18338186 PDBbind: -logKd/Ki=5.81, Kd=1.557uM
    BindingDB: Ki=970nM
    6748 2zju:B (2.58) BS01 IM4 ? GO:0004888 ... P58154 18338186 PDBbind: -logKd/Ki=5.81, Kd=1.557uM
    BindingDB: Ki=970nM
    6749 2zju:B (2.58) BS02 IM4 ? GO:0004888 ... P58154 18338186 PDBbind: -logKd/Ki=5.81, Kd=1.557uM
    BindingDB: Ki=970nM
    6750 2zjv:A (2.7) BS01 CT4 ? GO:0004888 ... P58154 18338186 PDBbind: -logKd/Ki=5.14, Kd=7.26uM
    6751 2zjv:A (2.7) BS02 CT4 ? GO:0004888 ... P58154 18338186 PDBbind: -logKd/Ki=5.14, Kd=7.26uM
    6752 2zjv:B (2.7) BS01 CT4 ? GO:0004888 ... P58154 18338186 PDBbind: -logKd/Ki=5.14, Kd=7.26uM
    6753 2zjv:B (2.7) BS02 CT4 ? GO:0004888 ... P58154 18338186 PDBbind: -logKd/Ki=5.14, Kd=7.26uM
    6754 2zjw:A (2.4) BS01 REF 2.7.11.1 GO:0004672 ... P68400 19414254 MOAD: Ki=0.02uM
    PDBbind: -logKd/Ki=7.70, Ki=0.02uM
    BindingDB: Ki=20nM, IC50=40nM
    6755 2zkj:A (2.0) BS01 ADP 2.7.11.2 GO:0004672 ... Q16654 18658136 MOAD: Kd=3.3uM
    PDBbind: -logKd/Ki=5.48, Kd=3.3uM
    6756 2zlg:A (2.52) BS01 MRT 1.17.4.1 GO:0000166 ... P21524 18610997 PDBbind: -logKd/Ki=5.59, IC50=2.6uM
    6757 2zm1:A (2.1) BS01 KSF 2.7.10.2 GO:0004672 ... P06239 18977146 MOAD: ic50=220nM
    PDBbind: -logKd/Ki=6.66, IC50=220nM
    BindingDB: IC50=220nM
    6758 2zm3:A (2.5) BS01 575 2.7.10.1 GO:0004672 ... P08069 18501599 MOAD: Kd=0.614uM
    PDBbind: -logKd/Ki=6.21, Kd=0.614uM
    BindingDB: IC50=2420nM
    6759 2zmd:A (2.88) BS01 537 2.7.12.1 GO:0004672 ... P33981 18480048 PDBbind: -logKd/Ki=7.01, Kd=0.098uM
    BindingDB: IC50=98nM
    6760 2zmj:A (2.35) BS02 MI4 ? GO:0003677 ... P13053 18710208 MOAD: ic50=30nM
    PDBbind: -logKd/Ki=7.52, IC50=30nM
    6761 2zmm:A (2.1) BS01 35B 3.1.3.48 GO:0004725 ... P18031 18798205 MOAD: Ki=25nM
    PDBbind: -logKd/Ki=7.60, Ki=25nM
    6762 2zn7:A (2.1) BS01 410 3.1.3.48 GO:0004725 ... P18031 18798205 MOAD: Ki=13nM
    PDBbind: -logKd/Ki=7.89, Ki=13nM
    6763 2zns:A (2.0) BS01 GLU ? GO:0015276 ... P39086 21893069 PDBbind: -logKd/Ki=6.54, Ki=290nM
    6764 2znt:A (1.6) BS01 DYH ? GO:0015276 ... P39086 21893069 MOAD: Ki=0.5nM
    PDBbind: -logKd/Ki=9.30, Ki=0.5nM
    BindingDB: Ki=0.740000nM
    6765 2znu:A (1.8) BS01 NDZ ? GO:0015276 ... P39086 21893069 MOAD: Ki=7.7nM
    PDBbind: -logKd/Ki=8.11, Ki=7.7nM
    6766 2zo3:H (1.7) BS03 33U 3.4.21.5 GO:0004252 ... P00734 19520086 MOAD: Ki=0.1nM
    PDBbind: -logKd/Ki=10.00, Ki=0.1nM
    BindingDB: Ki=0.036000nM
    6767 2zof:A (2.3) BS03 BES 3.4.13.18 GO:0004180 ... Q9D1A2 18550540 MOAD: ic50=7nM
    PDBbind: -logKd/Ki=8.15, IC50=7nM
    6768 2zof:A (2.3) BS04 BES 3.4.13.18 GO:0004180 ... Q9D1A2 18550540 MOAD: ic50=7nM
    PDBbind: -logKd/Ki=8.15, IC50=7nM
    6769 2zof:B (2.3) BS01 BES 3.4.13.18 GO:0004180 ... Q9D1A2 18550540 MOAD: ic50=7nM
    PDBbind: -logKd/Ki=8.15, IC50=7nM
    6770 2zof:B (2.3) BS04 BES 3.4.13.18 GO:0004180 ... Q9D1A2 18550540 MOAD: ic50=7nM
    PDBbind: -logKd/Ki=8.15, IC50=7nM
    6771 2zoq:A (2.39) BS01 5ID 2.7.11.24 GO:0000165 ... P27361 18983981 MOAD: ic50=0.9uM
    PDBbind: -logKd/Ki=6.05, IC50=0.9uM
    6772 2zp0:H (2.7) BS02 PI0 3.4.21.21 GO:0004252 ... P08709 N/A PDBbind: -logKd/Ki=7.60, IC50=25nM
    6773 2zq1:A (1.68) BS02 11U 3.4.21.4 GO:0004175 ... P00760 21111747 PDBbind: -logKd/Ki=6.62, Kd=239nM
    6774 2zq2:A (1.4) BS02 13U 3.4.21.4 GO:0004175 ... P00760 21111747 MOAD: Kd=276nM
    PDBbind: -logKd/Ki=6.56, Kd=276nM
    6775 2zsc:A (1.3) BS01 BTN ? GO:0005576 ... B9A0T7 19187241 PDBbind: -logKd/Ki=7.06, Kd=87nM
    6776 2zsc:B (1.3) BS01 BTN ? GO:0005576 ... B9A0T7 19187241 PDBbind: -logKd/Ki=7.06, Kd=87nM
    6777 2zu3:A (1.75) BS01 ZU3 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15    		 GO:0004197 ... P03313 19144641 PDBbind: -logKd/Ki=6.10, Ki=0.8uM
    6778 2zu4:A (1.93) BS01 ZU3 2.1.1.-
    2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0C6X7 19144641 PDBbind: -logKd/Ki=7.42, Ki=38nM
    BindingDB: Ki=38nM
    6779 2zu5:A (1.65) BS01 ZU5 2.1.1.-
    2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0C6X7 19144641 PDBbind: -logKd/Ki=7.00, Ki=99nM
    BindingDB: Ki=99nM
    6780 2zv2:A (2.4) BS01 609 2.7.11.17 GO:0004672 ... Q96RR4 21504895 PDBbind: -logKd/Ki=6.30, IC50=0.5uM
    BindingDB: IC50=5.0e+2nM
    6781 2zv9:A (2.76) BS01 PP2 2.7.10.2 GO:0004672 ... P25911 18984583 PDBbind: -logKd/Ki=8.05, IC50=9nM
    6782 2zva:A (2.6) BS01 1N1 2.7.10.2 GO:0004672 ... P25911 18984583 PDBbind: -logKd/Ki=7.96, IC50=11nM
    6783 2zvj:A (2.3) BS03 KOM 2.1.1.6 GO:0000287 ... P22734 19056347 PDBbind: -logKd/Ki=5.74, IC50=1.8uM
    6784 2zwz:A (2.36) BS01 ZWZ 3.2.1.51 GO:0004560 ... Q9WYE2 19967696 MOAD: Ki=16.3nM
    PDBbind: -logKd/Ki=7.79, Kd=16.3nM
    6785 2zx5:A (2.65) BS01 ZX5 3.2.1.51 GO:0004560 ... Q9WYE2 19967696 PDBbind: -logKd/Ki=12.33, Kd=0.469pM
    6786 2zx6:A (2.42) BS01 ZX6 3.2.1.51 GO:0004560 ... Q9WYE2 19967696 MOAD: Ki=0.475nM
    PDBbind: -logKd/Ki=10.60, Ki=25.1pM
    6787 2zx6:B (2.42) BS01 ZX6 3.2.1.51 GO:0004560 ... Q9WYE2 19967696 MOAD: Ki=0.475nM
    PDBbind: -logKd/Ki=10.60, Ki=25.1pM
    6788 2zx7:A (2.48) BS01 ZX7 3.2.1.51 GO:0004560 ... Q9WYE2 19967696 MOAD: Ki=0.427nM
    PDBbind: -logKd/Ki=10.49, Ki=32.2pM
    6789 2zx8:A (2.33) BS01 ZX8 3.2.1.51 GO:0004560 ... Q9WYE2 19967696 MOAD: Ki=0.441nM
    PDBbind: -logKd/Ki=9.64, Ki=231.4pM
    6790 2zx9:A (2.62) BS01 ZX9 3.2.1.51 GO:0004560 ... Q9WYE2 19967696 PDBbind: -logKd/Ki=10.27, Ki=54.2pM
    6791 2zxa:A (2.57) BS01 ZXA 3.2.1.51 GO:0004560 ... Q9WYE2 19967696 PDBbind: -logKd/Ki=8.35, Ki=4.47nM
    6792 2zxb:A (2.61) BS01 ZXB 3.2.1.51 GO:0004560 ... Q9WYE2 19967696 PDBbind: -logKd/Ki=5.30, Ki=5.0uM
    6793 2zxd:A (2.15) BS01 ZXD 3.2.1.51 GO:0004560 ... Q9WYE2 19967696 MOAD: Ki=6uM
    PDBbind: -logKd/Ki=5.22, Ki=6.0uM
    6794 2zxg:A (1.55) BS02 S23 3.4.11.2 GO:0004177 ... P04825 19622865 MOAD: Ki=0.00000079M
    PDBbind: -logKd/Ki=8.82, Ki=1.5nM
    6795 2zy1:A (1.78) BS01 830 2.5.1.96 GO:0003824 ... A9JQL9 19456099 MOAD: Ki=0.04uM
    PDBbind: -logKd/Ki=7.40, Ki=0.04uM
    6796 2zyb:A (2.55) BS01 KSL 2.7.10.2 GO:0004672 ... P06239 18977146 PDBbind: -logKd/Ki=7.70, IC50=20nM
    BindingDB: IC50=20nM
    6797 2zz2:A (1.53) BS01 6CN 4.1.1.23 GO:0004590 ... O26232 19236876 PDBbind: -logKd/Ki=4.54, Ki=29uM
    BindingDB: Ki=29000nM
    6798 2zz2:A (1.53) BS02 6CN 4.1.1.23 GO:0004590 ... O26232 19236876 PDBbind: -logKd/Ki=4.54, Ki=29uM
    BindingDB: Ki=29000nM
    6799 2zz2:B (1.53) BS01 6CN 4.1.1.23 GO:0004590 ... O26232 19236876 PDBbind: -logKd/Ki=4.54, Ki=29uM
    BindingDB: Ki=29000nM
    6800 2zz2:B (1.53) BS02 6CN 4.1.1.23 GO:0004590 ... O26232 19236876 PDBbind: -logKd/Ki=4.54, Ki=29uM
    BindingDB: Ki=29000nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218