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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    6001 2w1e:A (2.93) BS01 L0E 2.7.11.1 GO:0004672 ... O14965 19143567 PDBbind: -logKd/Ki=7.92, IC50=12nM
    6002 2w1f:A (2.85) BS01 L0F 2.7.11.1 GO:0004672 ... O14965 19143567 PDBbind: -logKd/Ki=8.23, IC50=5.9nM
    BindingDB: IC50=5.9nM
    6003 2w1g:A (2.71) BS01 L0G 2.7.11.1 GO:0004672 ... O14965 19143567 PDBbind: -logKd/Ki=8.52, IC50=3nM
    6004 2w1h:A (2.15) BS01 L0F 2.7.11.22 GO:0000082 ... P24941 19143567 MOAD: ic50=0.052uM
    PDBbind: -logKd/Ki=7.28, IC50=52nM
    BindingDB: IC50=52nM
    6005 2w1i:A (2.6) BS01 L0I 2.7.10.2 GO:0004672 ... O60674 19143567 PDBbind: -logKd/Ki=8.92, IC50=1.2nM
    6006 2w26:A (2.08) BS01 RIV 3.4.21.6 GO:0004252 ... P00742 16161994 MOAD: Ki=0.4nM
    PDBbind: -logKd/Ki=9.40, Ki=0.4nM
    BindingDB: IC50=700nM, Ki=0.400000nM
    6007 2w2i:A (2.1) BS01 PD2 1.14.11.66 N/A B2RXH2 21914792 PDBbind: -logKd/Ki=6.04, Ki=914nM
    BindingDB: IC50=1400nM, Ki=914000nM
    6008 2w3i:A (1.9) BS02 L1C 3.4.21.6 GO:0004252 ... P00742 19231206 MOAD: ic50=0.1nM
    PDBbind: -logKd/Ki=10.00, IC50=0.1nM
    BindingDB: IC50=0.1nM
    6009 2w3k:A (2.05) BS01 L1D 3.4.21.6 GO:0004252 ... P00742 19231206 MOAD: ic50=0.08nM
    PDBbind: -logKd/Ki=10.10, IC50=0.08nM
    BindingDB: IC50=0.08nM
    6010 2w3l:A (2.1) BS01 DRO ? GO:0042981 ... P10415 19027294 PDBbind: -logKd/Ki=7.52, IC50=0.03uM
    BindingDB: IC50=30nM
    6011 2w42:A (1.9) BS01 dna ? GO:0003676 ... O28951 19187762 PDBbind: Kd=29.2nM
    6012 2w42:A (1.9) BS02 dna ? GO:0003676 ... O28951 19187762 PDBbind: Kd=29.2nM
    6013 2w42:B (1.9) BS01 dna ? GO:0003676 ... O28951 19187762 PDBbind: Kd=29.2nM
    6014 2w42:B (1.9) BS02 dna ? GO:0003676 ... O28951 19187762 PDBbind: Kd=29.2nM
    6015 2w4i:A (1.87) BS02 VGA 5.1.1.3 GO:0008360 ... Q9ZLT0 19097892 PDBbind: -logKd/Ki=6.30, IC50=0.5uM
    BindingDB: IC50=500nM
    6016 2w4i:B (1.87) BS02 VGA 5.1.1.3 GO:0008360 ... Q9ZLT0 19097892 MOAD: ic50=0.5uM
    PDBbind: -logKd/Ki=6.30, IC50=0.5uM
    BindingDB: IC50=500nM
    6017 2w4x:A (2.42) BS01 STZ 3.2.1.169 GO:0005975 ... Q89ZI2 19217614 MOAD: Kd=14uM
    PDBbind: -logKd/Ki=4.85, Kd=14uM
    6018 2w54:B (3.3) BS02 HHR 1.1.1.204 GO:0005506 ... O54051 19109249 PDBbind: -logKd/Ki=6.98, Ki=103.6nM
    6019 2w5g:A (1.7) BS01 ATP 4.6.1.18 GO:0003676 ... P61823 19191310 MOAD: Ki=0.86uM
    PDBbind: -logKd/Ki=6.07, Ki=860nM
    6020 2w5i:A (2.4) BS01 ATP 4.6.1.18 GO:0003676 ... P61823 19191310 MOAD: Ki=0.86uM
    PDBbind: -logKd/Ki=4.54, Ki=29uM
    6021 2w66:A (2.27) BS01 HQ6 3.2.1.169 GO:0005975 ... Q89ZI2 19331390 MOAD: Ki=89uM
    PDBbind: -logKd/Ki=4.05, Ki=89uM
    6022 2w67:A (2.25) BS01 F34 3.2.1.169 GO:0005975 ... Q89ZI2 19331390 MOAD: Ki=11uM
    PDBbind: -logKd/Ki=4.96, Ki=11uM
    6023 2w68:A (2.5) BS01 SIA 3.2.1.18 GO:0033691 ... P0C6E9 19124471 PDBbind: -logKd/Ki=4.74, Kd=18uM
    6024 2w6c:X (2.69) BS01 BM4 3.1.1.7 GO:0001507 ... P04058 19326912 PDBbind: -logKd/Ki=8.41, IC50=3.9nM
    6025 2w6m:A (2.0) BS01 OA1 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=21.5uM
    PDBbind: -logKd/Ki=4.67, IC50=21.5uM
    BindingDB: IC50=21500nM
    6026 2w6n:A (1.87) BS01 OA2 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=0.125uM
    PDBbind: -logKd/Ki=6.90, IC50=0.125uM
    BindingDB: IC50=125nM
    6027 2w6o:A (2.5) BS01 OA3 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=60.8uM
    PDBbind: -logKd/Ki=4.22, IC50=60.8uM
    BindingDB: IC50=60800nM
    6028 2w6p:A (1.85) BS01 OA4 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=0.333uM
    PDBbind: -logKd/Ki=6.48, IC50=0.333uM
    BindingDB: IC50=333nM
    6029 2w6q:A (2.05) BS01 OA5 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=25.4uM
    PDBbind: -logKd/Ki=4.60, IC50=25.4uM
    BindingDB: IC50=25400nM
    6030 2w6z:A (1.9) BS01 L21 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=1500uM
    PDBbind: -logKd/Ki=2.82, IC50=1500uM
    BindingDB: IC50=1500000nM
    6031 2w70:A (1.77) BS01 L22 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=12uM
    PDBbind: -logKd/Ki=4.92, IC50=12.0uM
    BindingDB: IC50=12000nM
    6032 2w71:A (1.99) BS01 L23 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=0.334uM
    PDBbind: -logKd/Ki=6.48, IC50=0.334uM
    BindingDB: IC50=334nM
    6033 2w7n:A (1.85) BS01 dna ? GO:0003677 ... P03052 19190096 PDBbind: Kd=23.3nM
    6034 2w7n:A (1.85) BS02 dna ? GO:0003677 ... P03052 19190096 PDBbind: Kd=23.3nM
    6035 2w7n:A (1.85) BS03 dna ? GO:0003677 ... P03052 19190096 PDBbind: Kd=23.3nM
    6036 2w7n:A (1.85) BS04 dna ? GO:0003677 ... P03052 19190096 PDBbind: Kd=23.3nM
    6037 2w7n:B (1.85) BS01 dna ? GO:0003677 ... P03052 19190096 PDBbind: Kd=23.3nM
    6038 2w7n:B (1.85) BS02 dna ? GO:0003677 ... P03052 19190096 PDBbind: Kd=23.3nM
    6039 2w7n:B (1.85) BS03 dna ? GO:0003677 ... P03052 19190096 PDBbind: Kd=23.3nM
    6040 2w7n:B (1.85) BS04 dna ? GO:0003677 ... P03052 19190096 PDBbind: Kd=23.3nM
    6041 2w7x:A (2.07) BS01 D1A 2.7.11.1 GO:0004672 ... O96017 19741151 MOAD: ic50=24nM
    PDBbind: -logKd/Ki=7.62, IC50=24nM
    6042 2w7y:A (2.35) BS01 GAL N/A N/A N/A 19285508 PDBbind: -logKd/Ki=6.08, Kd=0.83uM
    6043 2w7y:A (2.35) BS02 FUC N/A N/A N/A 19285508 PDBbind: -logKd/Ki=6.08, Kd=0.83uM
    6044 2w87:A (1.6) BS03 GCU 3.2.1.- GO:0030246 ... Q51815 19218457 PDBbind: -logKd/Ki=4.65, Kd=22.2uM
    6045 2w8f:A (2.7) BS01 BS1 ? GO:0004888 ... Q8WSF8 19331415 PDBbind: -logKd/Ki=6.30, Ki=0.5uM
    6046 2w8f:B (2.7) BS01 BS1 ? GO:0004888 ... Q8WSF8 19331415 PDBbind: -logKd/Ki=6.30, Ki=0.5uM
    6047 2w8g:A (2.6) BS01 BS2 ? GO:0004888 ... Q8WSF8 19331415 PDBbind: -logKd/Ki=6.00, Ki=1uM
    6048 2w8g:A (2.6) BS02 BS2 ? GO:0004888 ... Q8WSF8 19331415 PDBbind: -logKd/Ki=6.00, Ki=1uM
    6049 2w8g:B (2.6) BS01 BS2 ? GO:0004888 ... Q8WSF8 19331415 PDBbind: -logKd/Ki=6.00, Ki=1uM
    6050 2w8j:A (1.5) BS01 PLS 2.3.1.50 GO:0005737 ... Q93UV0 19376777 PDBbind: -logKd/Ki=2.96, Kd=1.1mM
    6051 2w8k:A (3.1) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 19059910 PDBbind: Kd=29uM
    6052 2w8k:A (3.1) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 19059910 PDBbind: Kd=29uM
    6053 2w8l:A (3.0) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 19059910 PDBbind: Kd=29uM
    6054 2w8l:A (3.0) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 19059910 PDBbind: Kd=29uM
    6055 2w8w:A (2.14) BS01 PLS 2.3.1.50 GO:0005737 ... Q93UV0 19376777 PDBbind: -logKd/Ki=2.12, Kd=7.5mM
    6056 2w8y:A (1.8) BS01 486 ? N/A P06401 19372222 PDBbind: -logKd/Ki=9.09, Ki=0.82nM
    BindingDB: IC50=0.300000nM, Ki=1.1nM, EC50=>10000nM
    6057 2w92:A (1.65) BS01 NGT ? GO:0005737 ... Q93HW0 19181667 MOAD: Kd=28uM
    PDBbind: -logKd/Ki=4.55, Kd=28uM
    6058 2w9h:A (1.48) BS01 TOP 1.5.1.3 GO:0004146 ... P0A017 19280600 MOAD: Kd=430nM
    PDBbind: -logKd/Ki=6.37, Kd=430nM
    BindingDB: Ki=3.4nM, IC50=14.4nM
    6059 2wa3:A (2.5) BS02 A29 1.14.11.30
    1.14.11.n4    		 GO:0003714 ... Q9NWT6 20822901 MOAD: ic50=1mM
    PDBbind: -logKd/Ki=3.00, IC50=1mM
    6060 2wa4:A (2.5) BS02 069 1.14.11.30
    1.14.11.n4    		 GO:0003714 ... Q9NWT6 20822901 MOAD: ic50=18uM
    PDBbind: -logKd/Ki=4.74, IC50=18uM
    6061 2wa4:A (2.5) BS03 069 1.14.11.30
    1.14.11.n4    		 GO:0003714 ... Q9NWT6 20822901 MOAD: ic50=18uM
    PDBbind: -logKd/Ki=4.74, IC50=18uM
    6062 2waj:A (2.4) BS01 SNB 2.7.11.24 GO:0004672 ... P53779 19303774 MOAD: ic50=0.398uM
    PDBbind: -logKd/Ki=6.40, IC50=0.398uM
    BindingDB: IC50=398.11nM
    6063 2wap:A (2.8) BS01 PIX 3.1.1.-
    3.5.1.99    		 GO:0000139 ... P97612 19389627 PDBbind: -logKd/Ki=6.64, Ki=0.23uM
    6064 2wb5:A (2.31) BS01 VGB 3.2.1.169 N/A Q0TR53 19275764 PDBbind: -logKd/Ki=9.13, Ki=0.74nM
    6065 2wbb:A (2.22) BS01 RO3 3.1.3.11 GO:0000122 ... P09467 19969452 MOAD: ic50=0.92uM
    PDBbind: -logKd/Ki=6.04, IC50=0.92uM
    6066 2wbb:C (2.22) BS01 RO3 3.1.3.11 GO:0000122 ... P09467 19969452 MOAD: ic50=0.92uM
    PDBbind: -logKd/Ki=6.04, IC50=0.92uM
    6067 2wbd:A (2.4) BS01 RO5 3.1.3.11 GO:0000122 ... P09467 19969452 MOAD: ic50=0.23uM
    PDBbind: -logKd/Ki=6.64, IC50=0.23uM
    BindingDB: IC50=100nM
    6068 2wbd:C (2.4) BS01 RO5 3.1.3.11 GO:0000122 ... P09467 19969452 MOAD: ic50=0.23uM
    PDBbind: -logKd/Ki=6.64, IC50=0.23uM
    BindingDB: IC50=100nM
    6069 2wbg:A (1.85) BS01 LGS 3.2.1.21 GO:0004553 ... Q08638 19532990 MOAD: Ki=35.2uM
    PDBbind: -logKd/Ki=4.45, Ki=35.2uM
    6070 2wc3:A (2.0) BS01 AM3 3.2.1.21 GO:0004553 ... Q08638 19532990 MOAD: Ki=0.83uM
    PDBbind: -logKd/Ki=6.08, Ki=0.83uM
    6071 2wc4:A (1.7) BS01 AMF 3.2.1.21 GO:0004553 ... Q08638 19532990 MOAD: Kd=5.1uM
    PDBbind: -logKd/Ki=5.29, Kd=5.1uM
    6072 2wca:A (2.3) BS01 NP6 3.2.1.169 GO:0005975 ... Q89ZI2 19499593 PDBbind: -logKd/Ki=5.60, Ki=2.5uM
    6073 2wcg:A (2.3) BS01 MT5 2.4.1.-
    3.2.1.-
    3.2.1.45
    3.2.1.46    		 GO:0004336 ... P04062 19437524 MOAD: Ki=0.42uM
    PDBbind: -logKd/Ki=6.38, Ki=0.42uM
    6074 2wcx:A (2.0) BS03 VGC 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 19672916 MOAD: ic50=0.025uM
    PDBbind: -logKd/Ki=7.60, IC50=25nM
    6075 2wd1:A (2.0) BS01 ZZY 2.7.10.1 GO:0004672 ... P08581 19369077 MOAD: ic50=82nM
    PDBbind: -logKd/Ki=7.09, IC50=82nM
    BindingDB: IC50=82nM
    6076 2wd3:A (1.8) BS01 MS4 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 20148564 MOAD: ic50=86nM
    PDBbind: -logKd/Ki=7.07, IC50=86nM
    BindingDB: IC50=86nM
    6077 2wd3:A (1.8) BS02 MS4 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 20148564 MOAD: ic50=86nM
    PDBbind: -logKd/Ki=7.07, IC50=86nM
    BindingDB: IC50=86nM
    6078 2wd7:A (1.9) BS02 VGD 1.5.1.33 GO:0000166 ... O76290 19527033 MOAD: Ki=10.6uM
    PDBbind: -logKd/Ki=4.97, Ki=10.6uM
    BindingDB: Ki=10600nM
    6079 2we3:A (2.0) BS01 DUT 3.6.1.23 GO:0004170 ... P03195 19586911 PDBbind: -logKd/Ki=4.43, Kd=37uM
    6080 2web:A (1.5) BS01 PP4 3.4.23.20 GO:0004190 ... P00798 N/A MOAD: Ki=7.6uM
    PDBbind: -logKd/Ki=5.12, Ki=7.6uM
    6081 2wec:A (1.5) BS01 PP5 3.4.23.20 GO:0004190 ... P00798 N/A MOAD: Ki=110uM
    PDBbind: -logKd/Ki=3.96, Ki=110uM
    6082 2wed:A (1.5) BS01 PP6 3.4.23.20 GO:0004190 ... P00798 N/A MOAD: Ki=0.8uM
    PDBbind: -logKd/Ki=6.10, Ki=0.8uM
    6083 2weg:A (1.1) BS02 FBV 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19882701 MOAD: Kd=314nM
    PDBbind: -logKd/Ki=6.50, Kd=314nM
    6084 2weh:A (2.09) BS02 FB1 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19882701 MOAD: Kd=1125nM
    PDBbind: -logKd/Ki=5.95, Kd=1125nM
    6085 2wei:A (1.65) BS01 VGG 2.7.1.17 GO:0004672 ... A3FQ16 21962082 MOAD: ic50=3.4nM
    PDBbind: -logKd/Ki=8.47, IC50=3.4nM
    6086 2wej:A (1.45) BS02 FB2 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19882701 MOAD: Kd=839nM
    PDBbind: -logKd/Ki=6.08, Kd=839nM
    BindingDB: Ki=1103nM, Kd=1149700nM
    6087 2weo:A (1.4) BS02 FBW 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19882701 MOAD: Kd=118nM
    PDBbind: -logKd/Ki=6.93, Kd=118nM
    6088 2weq:A (2.2) BS01 GDM ? GO:0005524 ... P02829 19236053 MOAD: Kd=1.27uM
    PDBbind: -logKd/Ki=5.90, Kd=1.27uM
    6089 2wer:A (1.6) BS01 RDC ? GO:0005524 ... P02829 19236053 MOAD: Kd=90nM
    PDBbind: -logKd/Ki=7.05, Kd=90nM
    BindingDB: IC50=2e+2nM
    6090 2wev:A (2.3) BS01 CK7 2.7.11.22 GO:0000082 ... P24941 19472269 PDBbind: -logKd/Ki=8.00, IC50=0.01uM
    BindingDB: IC50=10.0nM, Ki=2nM
    6091 2wey:A (2.8) BS01 EV1 3.1.4.17 GO:0004114 ... Q9Y233 19622871 PDBbind: -logKd/Ki=7.12, IC50=76nM
    BindingDB: IC50=36nM
    6092 2wez:A (1.7) BS01 ZYE 3.4.23.46 GO:0004190 ... P56817 19428244 MOAD: ic50=0.023uM
    PDBbind: -logKd/Ki=7.64, IC50=0.023uM
    6093 2wf0:A (1.6) BS01 ZY0 3.4.23.46 GO:0004190 ... P56817 19428244 MOAD: ic50=0.21uM
    PDBbind: -logKd/Ki=6.68, IC50=0.21uM
    BindingDB: IC50=210nM
    6094 2wf1:A (1.6) BS01 ZY1 3.4.23.46 GO:0004190 ... P56817 19477642 MOAD: ic50=0.002uM
    PDBbind: -logKd/Ki=8.70, IC50=2nM
    BindingDB: IC50=2nM
    6095 2wf2:A (1.8) BS01 ZY2 3.4.23.46 GO:0004190 ... P56817 19477642 MOAD: ic50=0.026uM
    PDBbind: -logKd/Ki=7.59, IC50=26nM
    6096 2wf3:A (2.08) BS01 ZY3 3.4.23.46 GO:0004190 ... P56817 19477642 MOAD: ic50=0.019uM
    PDBbind: -logKd/Ki=7.72, IC50=19nM
    6097 2wf4:A (1.8) BS01 ZY4 3.4.23.46 GO:0004190 ... P56817 19406640 MOAD: ic50=13nM
    PDBbind: -logKd/Ki=7.89, IC50=13nM
    6098 2wf5:A (1.3) BS01 BG6 5.4.2.6 GO:0000287 ... P71447 20164409 PDBbind: -logKd/Ki=6.00, Kd=1uM
    6099 2wfg:A (2.2) BS01 ZZB N/A GO:0000166 ... N/A 19426743 MOAD: ic50=38uM
    PDBbind: -logKd/Ki=4.42, IC50=38uM
    6100 2wgi:A (2.85) BS01 PNM 3.5.2.6 GO:0008658 ... P14489 19860471 PDBbind: -logKd/Ki=4.07, Kd=85uM
    6101 2wgj:A (2.0) BS01 VGH 2.7.10.1 GO:0004672 ... P08581 21812414 MOAD: Ki=0.002uM
    PDBbind: -logKd/Ki=8.70, Ki=0.002uM
    BindingDB: IC50=8nM, Kd=2.0nM, Ki=2nM
    6102 2wgs:A (2.55) BS01 1AZ 6.3.1.2 GO:0000287 ... P9WN39 19695264 PDBbind: -logKd/Ki=5.60, IC50=2.5uM
    6103 2who:A (2.0) BS03 VGI 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 19877603 MOAD: ic50=0.02uM
    PDBbind: -logKd/Ki=7.70, IC50=20nM
    BindingDB: IC50=20nM, EC50=7100nM
    6104 2whp:A (2.2) BS01 HI6 3.1.1.7 GO:0001919 ... P21836 19536291 MOAD: Kd~100uM
    PDBbind: -logKd/Ki=4.00, Kd=100uM
    6105 2wi1:A (2.3) BS02 ZZ2 3.6.4.10 GO:0005524 ... P07900 19610616 MOAD: ic50>4000uM
    PDBbind: -logKd/Ki=2.40, IC50>4000uM
    6106 2wi2:A (2.09) BS01 ZZ3 3.6.4.10 GO:0005524 ... P07900 19610616 MOAD: ic50=350uM
    PDBbind: -logKd/Ki=3.46, IC50=350uM
    6107 2wi3:A (1.9) BS02 ZZ3 3.6.4.10 GO:0005524 ... P07900 19610616 MOAD: ic50=350uM
    PDBbind: -logKd/Ki=3.46, IC50=350uM
    6108 2wi4:A (2.4) BS01 ZZ4 3.6.4.10 GO:0005524 ... P07900 19610616 MOAD: ic50=1.56uM
    PDBbind: -logKd/Ki=5.81, IC50=1.56uM
    6109 2wi5:A (2.1) BS01 ZZ5 3.6.4.10 GO:0005524 ... P07900 19610616 MOAD: ic50=0.9uM
    PDBbind: -logKd/Ki=6.05, IC50=0.90uM
    6110 2wi6:A (2.18) BS01 ZZ6 3.6.4.10 GO:0005524 ... P07900 19610616 MOAD: ic50=0.23uM
    PDBbind: -logKd/Ki=6.64, IC50=0.23uM
    6111 2wi7:A (2.5) BS01 2KL 3.6.4.10 GO:0005524 ... P07900 19610616 MOAD: ic50=0.058uM
    PDBbind: -logKd/Ki=7.24, IC50=58nM
    6112 2wib:A (2.56) BS01 GDP ? GO:0005525 ... A6TF32 20123128 PDBbind: -logKd/Ki=4.93, Kd=11.8uM
    6113 2wib:A (2.56) BS02 GDP ? GO:0005525 ... A6TF32 20123128 PDBbind: -logKd/Ki=4.93, Kd=11.8uM
    6114 2wic:A (2.05) BS01 GNP ? GO:0005525 ... A6TF32 20123128 PDBbind: -logKd/Ki=5.39, Kd=4.1uM
    6115 2wig:A (2.15) BS03 TC3 3.1.1.8 GO:0001540 ... P06276 19368529 PDBbind: -logKd/Ki=3.43, Kd=370uM
    6116 2wih:A (2.5) BS01 P48 2.7.11.22 GO:0000082 ... P24941 19603809 MOAD: ic50=0.045uM
    PDBbind: -logKd/Ki=7.35, IC50=45nM
    BindingDB: IC50=45nM
    6117 2wij:A (2.1) BS03 TN7 3.1.1.8 GO:0001540 ... P06276 19368529 PDBbind: -logKd/Ki=3.20, Kd=630uM
    6118 2wik:A (2.1) BS03 TC5 3.1.1.8 GO:0001540 ... P06276 19368529 PDBbind: -logKd/Ki=3.18, Kd=660uM
    6119 2wj1:A (1.84) BS01 S99 3.1.1.-
    3.5.1.99    		 GO:0000139 ... P97612 19722626 PDBbind: -logKd/Ki=8.72, Ki=1.9nM
    6120 2wj2:A (2.55) BS01 OL1 3.1.1.-
    3.5.1.99    		 GO:0000139 ... P97612 19722626 PDBbind: -logKd/Ki=8.33, Ki=4.7nM
    6121 2wjg:A (2.2) BS01 GDP ? GO:0005525 ... Q57986 19615379 PDBbind: -logKd/Ki=7.10, Kd=0.08uM
    6122 2wji:A (1.903) BS01 GNP ? GO:0005525 ... Q57986 19615379 PDBbind: -logKd/Ki=5.02, Kd=9.6uM
    6123 2wk2:A (2.05) BS01 SN5 3.2.1.14 GO:0000272 ... P07254 20209544 PDBbind: -logKd/Ki=6.82, Ki=0.15uM
    6124 2wk2:A (2.05) BS02 SN5 3.2.1.14 GO:0000272 ... P07254 20209544 PDBbind: -logKd/Ki=6.82, Ki=0.15uM
    6125 2wk2:A (2.05) BS03 SN5 3.2.1.14 GO:0000272 ... P07254 20209544 PDBbind: -logKd/Ki=6.82, Ki=0.15uM
    6126 2wk2:A (2.05) BS04 NGT 3.2.1.14 GO:0000272 ... P07254 20209544 PDBbind: -logKd/Ki=6.82, Ki=0.15uM
    6127 2wk6:A (2.5) BS01 IUR 2.4.2.4 GO:0000002 ... P19971 19555658 MOAD: Ki=0.48mM
    PDBbind: -logKd/Ki=3.32, Ki=0.48mM
    6128 2wks:A (2.95) BS01 CB6 4.2.1.10 GO:0003855 ... Q48255 19911771 PDBbind: -logKd/Ki=6.89, Ki=130nM
    6129 2wks:B (2.95) BS01 CB6 4.2.1.10 GO:0003855 ... Q48255 19911771 PDBbind: -logKd/Ki=6.89, Ki=130nM
    6130 2wks:B (2.95) BS02 CB6 4.2.1.10 GO:0003855 ... Q48255 19911771 PDBbind: -logKd/Ki=6.89, Ki=130nM
    6131 2wky:A (2.2) BS01 IBC ? GO:0015276 ... P22756 19588945 MOAD: Ki=2.57nM
    PDBbind: -logKd/Ki=8.59, Ki=2.57nM
    6132 2wkz:A (1.7) BS01 5AH 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P12499 19961222 PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    6133 2wkz:B (1.7) BS01 5AH 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P12499 19961222 MOAD: Ki=1.7nM
    PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    6134 2wl0:A (1.9) BS01 5AH 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P12499 19961222 MOAD: Ki=16nM
    PDBbind: -logKd/Ki=7.80, Ki=16nM
    6135 2wl0:B (1.9) BS01 5AH 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P12499 19961222 PDBbind: -logKd/Ki=7.80, Ki=16nM
    6136 2wly:A (2.4) BS01 SN5 3.2.1.14 GO:0000272 ... P07254 20209544 PDBbind: -logKd/Ki=6.60, Ki=0.25uM
    6137 2wly:A (2.4) BS02 NGT 3.2.1.14 GO:0000272 ... P07254 20209544 PDBbind: -logKd/Ki=6.60, Ki=0.25uM
    6138 2wlz:A (1.82) BS01 NGT 3.2.1.14 GO:0000272 ... P07254 20209544 PDBbind: -logKd/Ki=4.60, Ki=25uM
    6139 2wm0:A (1.9) BS01 NGT 3.2.1.14 GO:0000272 ... P07254 20209544 PDBbind: -logKd/Ki=4.52, Ki=30uM
    6140 2wmr:A (2.43) BS01 ZYR 2.7.11.1 GO:0000077 ... O14757 19572549 MOAD: ic50=52uM
    PDBbind: -logKd/Ki=4.28, IC50=52uM
    BindingDB: IC50=52000nM
    6141 2wmu:A (2.6) BS01 ZYU 2.7.11.1 GO:0000077 ... O14757 19572549 PDBbind: -logKd/Ki=4.38, IC50=42uM
    BindingDB: IC50=42000nM
    6142 2wmv:A (2.009) BS01 ZYV 2.7.11.1 GO:0000077 ... O14757 19572549 MOAD: ic50=9.2uM
    PDBbind: -logKd/Ki=5.04, IC50=9.2uM
    BindingDB: IC50=9200nM
    6143 2wmw:A (2.43) BS01 ZYW 2.7.11.1 GO:0000077 ... O14757 19572549 MOAD: ic50=0.39uM
    PDBbind: -logKd/Ki=6.41, IC50=0.39uM
    BindingDB: IC50=390nM
    6144 2wmx:A (2.45) BS01 ZY6 2.7.11.1 GO:0000077 ... O14757 19572549 MOAD: ic50=0.86uM
    PDBbind: -logKd/Ki=6.07, IC50=0.86uM
    BindingDB: IC50=890nM
    6145 2wn9:A (1.75) BS01 ZY5 ? GO:0004888 ... Q8WSF8 19696737 MOAD: Kd=3nM
    PDBbind: -logKd/Ki=8.52, Kd=3.0nM
    6146 2wn9:A (1.75) BS02 ZY5 ? GO:0004888 ... Q8WSF8 19696737 MOAD: Kd=3nM
    PDBbind: -logKd/Ki=8.52, Kd=3.0nM
    6147 2wn9:E (1.75) BS01 ZY5 ? GO:0004888 ... Q8WSF8 19696737 MOAD: Kd=3nM
    PDBbind: -logKd/Ki=8.52, Kd=3.0nM
    6148 2wn9:E (1.75) BS02 ZY5 ? GO:0004888 ... Q8WSF8 19696737 MOAD: Kd=3nM
    PDBbind: -logKd/Ki=8.52, Kd=3.0nM
    6149 2wnc:A (2.2) BS01 TKT ? GO:0004888 ... Q8WSF8 19696737 MOAD: Kd=479nM
    PDBbind: -logKd/Ki=6.32, Kd=479nM
    6150 2wnc:A (2.2) BS02 TKT ? GO:0004888 ... Q8WSF8 19696737 MOAD: Kd=479nM
    PDBbind: -logKd/Ki=6.32, Kd=479nM
    6151 2wnc:E (2.2) BS01 TKT ? GO:0004888 ... Q8WSF8 19696737 MOAD: Kd=479nM
    PDBbind: -logKd/Ki=6.32, Kd=479nM
    6152 2wnc:E (2.2) BS02 TKT ? GO:0004888 ... Q8WSF8 19696737 MOAD: Kd=479nM
    PDBbind: -logKd/Ki=6.32, Kd=479nM
    6153 2wnj:A (1.8) BS01 ZY7 ? GO:0004888 ... Q8WSF8 19696737 MOAD: Kd=330nM
    PDBbind: -logKd/Ki=6.48, Kd=330nM
    6154 2wnj:A (1.8) BS02 ZY7 ? GO:0004888 ... Q8WSF8 19696737 MOAD: Kd=330nM
    PDBbind: -logKd/Ki=6.48, Kd=330nM
    6155 2wnj:E (1.8) BS01 ZY7 ? GO:0004888 ... Q8WSF8 19696737 MOAD: Kd=330nM
    PDBbind: -logKd/Ki=6.48, Kd=330nM
    6156 2wnj:E (1.8) BS02 ZY7 ? GO:0004888 ... Q8WSF8 19696737 MOAD: Kd=330nM
    PDBbind: -logKd/Ki=6.48, Kd=330nM
    6157 2wnl:F (2.7) BS01 AN5 ? GO:0004888 ... Q8WSF8 19696737 PDBbind: -logKd/Ki=6.00, Kd=1000nM
    6158 2wnl:J (2.7) BS01 AN5 ? GO:0004888 ... Q8WSF8 19696737 PDBbind: -logKd/Ki=6.00, Kd=1000nM
    6159 2wo8:A (2.0) BS04 077 3.4.24.65 GO:0004222 ... P39900 19703773 MOAD: ic50=0.52uM
    PDBbind: -logKd/Ki=6.28, IC50=0.52uM
    BindingDB: IC50=520nM
    6160 2wo9:A (1.7) BS04 068 3.4.24.65 GO:0004222 ... P39900 19703773 MOAD: ic50=0.062uM
    PDBbind: -logKd/Ki=7.21, IC50=62nM
    BindingDB: IC50=62nM
    6161 2woa:A (2.3) BS04 576 3.4.24.65 GO:0004222 ... P39900 19703773 MOAD: ic50=1.15uM
    PDBbind: -logKd/Ki=5.94, IC50=1.15uM
    6162 2won:A (2.8) BS01 ZZE 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 20660667 PDBbind: -logKd/Ki=6.20, Kd=624nM
    6163 2woq:A (1.75) BS01 AYC 4.2.1.24 GO:0004655 ... Q59643 19822707 PDBbind: -logKd/Ki=2.88, Ki=1.33mM
    6164 2wor:A (1.7) BS02 2AN ? GO:0000302 ... P31151 19810752 MOAD: Kd=125uM
    PDBbind: -logKd/Ki=3.90, Kd=125uM
    6165 2wos:A (1.7) BS02 6AN ? GO:0000302 ... P31151 19810752 PDBbind: -logKd/Ki=3.90, Kd=125uM
    6166 2wot:A (1.85) BS01 ZZG 2.7.11.30 GO:0004672 ... P36897 19736928 MOAD: ic50=44nM
    PDBbind: -logKd/Ki=7.36, IC50=44nM
    BindingDB: IC50=44nM, EC50=55nM
    6167 2wou:A (2.3) BS01 ZZF 2.7.11.30 GO:0004672 ... P36897 19736928 MOAD: ic50=72nM
    PDBbind: -logKd/Ki=7.14, IC50=72nM
    BindingDB: EC50=22nM, IC50=72nM
    6168 2wpa:A (2.51) BS01 889 2.7.11.22 GO:0000082 ... P24941 20153204 PDBbind: -logKd/Ki=8.10, IC50=8nM
    6169 2wpb:A (2.05) BS01 ZZI 4.1.3.3 GO:0005737 ... P0A6L4 20826162 MOAD: Ki=1.3mM
    PDBbind: -logKd/Ki=2.89, Ki=1.3mM
    6170 2wpb:C (2.05) BS01 ZZI 4.1.3.3 GO:0005737 ... P0A6L4 20826162 MOAD: Ki=1.3mM
    PDBbind: -logKd/Ki=2.89, Ki=1.3mM
    6171 2wpb:D (2.05) BS01 ZZI 4.1.3.3 GO:0005737 ... P0A6L4 20826162 MOAD: Ki=1.3mM
    PDBbind: -logKd/Ki=2.89, Ki=1.3mM
    6172 2wq4:A (1.42) BS01 SFU ? N/A B4EH86 20152153 PDBbind: -logKd/Ki=2.57, Kd=2700uM
    6173 2wq4:A (1.42) BS02 SFU ? N/A B4EH86 20152153 PDBbind: -logKd/Ki=2.57, Kd=2700uM
    6174 2wq4:C (1.42) BS01 SFU ? N/A B4EH86 20152153 PDBbind: -logKd/Ki=2.57, Kd=2700uM
    6175 2wq4:C (1.42) BS02 SFU ? N/A B4EH86 20152153 PDBbind: -logKd/Ki=2.57, Kd=2700uM
    6176 2wq5:A (1.65) BS01 MIY 3.1.1.4 GO:0004623 ... P15445 20211188 MOAD: Kd=180uM
    PDBbind: -logKd/Ki=3.74, Kd=180uM
    6177 2wqb:A (2.95) BS01 QQ1 2.7.10.1 GO:0004672 ... Q02763 19854647 PDBbind: -logKd/Ki=6.27, IC50=0.54uM
    BindingDB: IC50=540nM
    6178 2wqp:A (1.75) BS01 WQP ? GO:0016051 ... Q7DDU0 19719325 MOAD: Ki=3.1uM
    PDBbind: -logKd/Ki=5.51, Ki=3.1uM
    6179 2wr8:A (1.77) BS01 SAH 3.13.2.3 GO:0016787 ... O58212 19739191 MOAD: Ki=3.6uM
    PDBbind: -logKd/Ki=5.44, Ki=3.6uM
    6180 2wsx:A (3.5) BS01 NM2 ? GO:0005886 ... P31553 20829798 PDBbind: -logKd/Ki=2.41, Kd=3.9mM
    6181 2wsx:A (3.5) BS02 NM2 ? GO:0005886 ... P31553 20829798 PDBbind: -logKd/Ki=2.41, Kd=3.9mM
    6182 2wtc:A (3.0) BS01 VGM 2.7.11.1 GO:0004672 ... O96017 20022510 PDBbind: -logKd/Ki=6.51, IC50=0.31uM
    BindingDB: IC50=310nM
    6183 2wtd:A (2.75) BS01 ZZK 2.7.11.1 GO:0004672 ... O96017 20022510 PDBbind: -logKd/Ki=6.68, IC50=0.21uM
    BindingDB: EC50=10000nM
    6184 2wti:A (2.5) BS01 WTI 2.7.11.1 GO:0004672 ... O96017 20022510 MOAD: ic50=0.092uM
    PDBbind: -logKd/Ki=7.04, IC50=92nM
    BindingDB: EC50=5000nM
    6185 2wtj:A (2.1) BS01 WTJ 2.7.11.1 GO:0004672 ... O96017 20022510 MOAD: ic50=0.7uM
    PDBbind: -logKd/Ki=6.15, IC50=0.7uM
    BindingDB: IC50=700nM
    6186 2wtv:A (2.4) BS01 ZZL 2.7.11.1 GO:0000212 ... O14965 20067443 MOAD: Ki=1.8nM
    PDBbind: -logKd/Ki=8.74, Ki=1.8nM
    BindingDB: IC50=34nM, Kd=6.5nM
    6187 2wtw:A (3.302) BS01 ZZL 2.7.11.1 GO:0000212 ... O14965 20067443 PDBbind: -logKd/Ki=8.19, Kd=6.5nM
    BindingDB: IC50=34nM, Kd=6.5nM
    6188 2wtx:C (2.2) BS02 VDO 2.4.1.15 GO:0003824 ... P31677 20077550 MOAD: Ki=1.3mM
    PDBbind: -logKd/Ki=2.89, Ki=1.3mM
    6189 2wu6:A (1.92) BS01 DKI 2.7.12.1 GO:0004672 ... P49761 21276940 MOAD: ic50=29.2nM
    PDBbind: -logKd/Ki=7.53, IC50=29.2nM
    BindingDB: IC50=29nM
    6190 2wu7:A (2.25) BS01 V25 2.7.12.1 GO:0004672 ... P49761 21276940 MOAD: ic50=530nM
    PDBbind: -logKd/Ki=6.28, IC50=530nM
    6191 2wuf:B (1.9) BS01 KEM 3.7.1.17
    3.7.1.8    		 GO:0003824 ... P9WNH5 19875455 MOAD: Kd=51uM
    PDBbind: -logKd/Ki=4.29, Kd=51uM
    6192 2wuu:A (1.42) BS01 NHW 2.3.1.97 GO:0004379 ... D0AB09 20036251 MOAD: ic50=68.7nM
    PDBbind: -logKd/Ki=7.16, IC50=68.7nM
    6193 2wva:V (2.2) BS01 TPU 4.1.1.1 GO:0000287 ... P06672 20099870 PDBbind: -logKd/Ki=10.70, Kd=20pM
    6194 2wva:V (2.2) BS04 TPU 4.1.1.1 GO:0000287 ... P06672 20099870 PDBbind: -logKd/Ki=10.70, Kd=20pM
    6195 2wva:Z (2.2) BS01 TPU 4.1.1.1 GO:0000287 ... P06672 20099870 PDBbind: -logKd/Ki=10.70, Kd=20pM
    6196 2wva:Z (2.2) BS04 TPU 4.1.1.1 GO:0000287 ... P06672 20099870 PDBbind: -logKd/Ki=10.70, Kd=20pM
    6197 2wvt:A (1.8) BS01 FHN ? GO:0004560 ... Q8A3I4 20092273 MOAD: Kd=755nM
    PDBbind: -logKd/Ki=6.12, Kd=755nM
    6198 2wvz:A (2.4) BS02 KIF ? GO:0000224 ... Q8A0N1 20081828 MOAD: Ki=96uM
    PDBbind: -logKd/Ki=4.02, Ki=96uM
    6199 2ww0:A (2.8) BS02 SWA ? GO:0000224 ... Q8A0N1 20081828 PDBbind: -logKd/Ki=5.30, Ki=5uM
    6200 2ww2:B (1.9) BS01 SWA ? GO:0000224 ... Q8A5N9 20081828 MOAD: Ki=14uM
    PDBbind: -logKd/Ki=4.85, Ki=14uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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