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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    5801 2v25:A (1.49) BS01 ASP ? N/A Q0P9X8 17631313 PDBbind: -logKd/Ki=5.72, Kd=1.9uM
    5802 2v2c:A (1.89) BS01 PGA 5.3.1.1 GO:0004807 ... P04789 18219118 MOAD: Ki=0.39mM
    PDBbind: -logKd/Ki=3.41, Ki=0.39mM
    5803 2v2h:A (1.18) BS01 PGA 5.3.1.1 GO:0004807 ... P04789 18219118 MOAD: Ki=0.17mM
    PDBbind: -logKd/Ki=3.77, Ki=0.17mM
    5804 2v2q:A (2.3) BS02 NVG 2.7.1.148 GO:0005524 ... O67060 18033714 MOAD: Ki=71.2uM
    PDBbind: -logKd/Ki=4.15, Ki=71.2uM
    5805 2v2v:A (2.4) BS04 V12 2.7.1.148 GO:0005524 ... O67060 18033714 MOAD: Ki=85.8uM
    PDBbind: -logKd/Ki=4.07, Ki=85.8uM
    5806 2v3d:A (1.96) BS01 NBV 2.4.1.-
    3.2.1.-
    3.2.1.45
    3.2.1.46    		 GO:0004336 ... P04062 17666401 MOAD: Ki=116uM
    PDBbind: -logKd/Ki=3.94, Ki=116uM
    BindingDB: IC50=400000nM, Ki=116000nM
    5807 2v3e:A (2.0) BS01 NND 2.4.1.-
    3.2.1.-
    3.2.1.45
    3.2.1.46    		 GO:0004336 ... P04062 17666401 MOAD: Ki=0.3uM
    PDBbind: -logKd/Ki=6.52, Ki=0.3uM
    BindingDB: Ki=300nM, IC50=300nM
    5808 2v3u:A (1.74) BS01 DSN ? GO:0015276 ... Q63226 17715062 MOAD: Kd=1mM
    PDBbind: -logKd/Ki=3.00, Kd=1mM
    5809 2v54:A (2.4) BS01 TYD 2.7.4.9 GO:0004550 ... P68693 18971333 PDBbind: -logKd/Ki=4.60, Ki=25uM
    5810 2v57:A (1.9) BS01 PRL ? GO:0000976 ... Q58L87 19820093 MOAD: Kd=79nM
    PDBbind: -logKd/Ki=7.10, Kd=79nM
    5811 2v58:A (2.1) BS01 LZJ 6.3.4.14 GO:0003824 ... P24182 19164768 MOAD: Kd=0.82nM
    PDBbind: -logKd/Ki=9.09, Kd=0.82nM
    BindingDB: IC50=<1nM
    5812 2v59:A (2.4) BS01 LZK 6.3.4.14 GO:0003824 ... P24182 19164768 MOAD: Kd=6.53nM
    PDBbind: -logKd/Ki=7.74, Kd=18nM
    5813 2v5a:A (2.31) BS01 LZL 6.3.4.14 GO:0003824 ... P24182 19164768 MOAD: ic50=150nM
    PDBbind: -logKd/Ki=6.82, IC50=150nM
    5814 2v5x:A (2.25) BS02 V5X 3.5.1.-
    3.5.1.98    		 GO:0000118 ... Q9BY41 17721440 MOAD: Kd=220nM
    PDBbind: -logKd/Ki=6.66, Kd=220nM
    5815 2v5x:A (2.25) BS03 V5X 3.5.1.-
    3.5.1.98    		 GO:0000118 ... Q9BY41 17721440 MOAD: Kd=220nM
    PDBbind: -logKd/Ki=6.66, Kd=220nM
    5816 2v6e:A (3.2) BS01 dna 3.1.22.- N/A Q6UAV6 17889664 PDBbind: Kd=17nM
    5817 2v6e:A (3.2) BS02 dna 3.1.22.- N/A Q6UAV6 17889664 PDBbind: Kd=17nM
    5818 2v6e:A (3.2) BS03 dna 3.1.22.- N/A Q6UAV6 17889664 PDBbind: Kd=17nM
    5819 2v6e:B (3.2) BS01 dna 3.1.22.- N/A Q6UAV6 17889664 PDBbind: Kd=17nM
    5820 2v6e:B (3.2) BS02 dna 3.1.22.- N/A Q6UAV6 17889664 PDBbind: Kd=17nM
    5821 2v6e:B (3.2) BS03 dna 3.1.22.- N/A Q6UAV6 17889664 PDBbind: Kd=17nM
    5822 2v6n:A (1.98) BS01 XP1 2.1.1.-
    2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0C6X7 18559270 PDBbind: -logKd/Ki=5.86, Ki=1.38uM
    BindingDB: Ki=1380nM
    5823 2v77:A (1.603) BS01 PAY 3.4.17.1 GO:0004181 ... P15085 18566513 MOAD: Ki=8.7uM
    PDBbind: -logKd/Ki=5.06, Ki=8.7uM
    5824 2v7a:A (2.5) BS01 627 2.7.10.2 GO:0004672 ... P00519 17804707 MOAD: Kd=0.005uM
    PDBbind: -logKd/Ki=8.30, Kd=0.005uM
    5825 2v95:A (1.93) BS01 HCY ? GO:0004867 ... P31211 17644521 PDBbind: -logKd/Ki=8.30, Kd=5.0nM
    5826 2v96:A (2.4) BS01 CFQ 3.1.1.7 GO:0001507 ... P04058 18007027 MOAD: Ki=29uM
    PDBbind: -logKd/Ki=4.54, Ki=29uM
    5827 2v96:A (2.4) BS02 CFQ 3.1.1.7 GO:0001507 ... P04058 18007027 MOAD: Ki=29uM
    PDBbind: -logKd/Ki=4.54, Ki=29uM
    5828 2va5:A (2.75) BS01 C8C 3.4.23.46 GO:0004190 ... P56817 17985862 PDBbind: -logKd/Ki=4.07, IC50=86uM
    BindingDB: IC50=130000nM
    5829 2va6:A (2.5) BS01 H24 3.4.23.46 GO:0004190 ... P56817 17985862 MOAD: ic50=0.67uM
    PDBbind: -logKd/Ki=6.17, IC50=0.67uM
    BindingDB: IC50=91000nM
    5830 2va7:A (2.2) BS01 C27 3.4.23.46 GO:0004190 ... P56817 17985862 MOAD: ic50=0.2uM
    PDBbind: -logKd/Ki=6.70, IC50=0.20uM
    BindingDB: IC50=200nM
    5831 2vaq:A (3.01) BS01 VAW 4.3.3.2 GO:0005773 ... P68175 18081287 PDBbind: -logKd/Ki=8.52, IC50=3nM
    5832 2vb8:A (1.52) BS01 TLM 2.3.1.41 GO:0004315 ... P0A953 18084068 PDBbind: -logKd/Ki=4.60, Kd=25uM
    BindingDB: IC50=12000nM
    5833 2vb8:B (1.52) BS01 TLM 2.3.1.41 GO:0004315 ... P0A953 18084068 PDBbind: -logKd/Ki=4.60, Kd=25uM
    BindingDB: IC50=12000nM
    5834 2vba:A (1.36) BS01 P4T 2.3.1.41 GO:0004315 ... P0A953 18084068 MOAD: Kd=25uM
    PDBbind: -logKd/Ki=4.60, Kd=25uM
    5835 2vba:B (1.36) BS01 P4T 2.3.1.41 GO:0004315 ... P0A953 18084068 PDBbind: -logKd/Ki=4.60, Kd=25uM
    5836 2vc7:A (2.05) BS03 HT5 3.1.8.1 GO:0004063 ... Q97VT7 18486146 MOAD: Ki=432.7uM
    PDBbind: -logKd/Ki=3.36, Ki=432.7uM
    5837 2vc7:B (2.05) BS03 HT5 3.1.8.1 GO:0004063 ... Q97VT7 18486146 MOAD: Ki=432.7uM
    PDBbind: -logKd/Ki=3.36, Ki=432.7uM
    5838 2vc9:A (2.36) BS01 NOK 3.2.1.50 N/A A0A0H2YU91 18443291 MOAD: Kd=3.6nM
    PDBbind: -logKd/Ki=8.44, Kd=3.6nM
    5839 2vcb:A (2.2) BS01 OAN 3.2.1.50 N/A A0A0H2YU91 18443291 PDBbind: -logKd/Ki=5.26, Kd=5.5uM
    5840 2vcg:A (1.9) BS02 S17 3.5.1.- GO:0000122 ... Q70I53 18054239 PDBbind: -logKd/Ki=5.77, IC50=1.69uM
    5841 2vcg:A (1.9) BS03 S17 3.5.1.- GO:0000122 ... Q70I53 18054239 PDBbind: -logKd/Ki=5.77, IC50=1.69uM
    5842 2vcg:D (1.9) BS01 S17 3.5.1.- GO:0000122 ... Q70I53 18054239 PDBbind: -logKd/Ki=5.77, IC50=1.69uM
    5843 2vcg:D (1.9) BS04 S17 3.5.1.- GO:0000122 ... Q70I53 18054239 PDBbind: -logKd/Ki=5.77, IC50=1.69uM
    5844 2vci:A (2.0) BS01 2GJ 3.6.4.10 GO:0005524 ... P07900 18020435 MOAD: ic50=0.021uM
    PDBbind: -logKd/Ki=7.68, IC50=21nM
    BindingDB: IC50=61nM, EC50=7nM, Ki=9nM
    5845 2vcj:A (2.5) BS01 2EQ 3.6.4.10 GO:0005524 ... P07900 18020435 MOAD: ic50=0.021uM
    PDBbind: -logKd/Ki=7.68, IC50=21nM
    BindingDB: IC50=<10000nM
    5846 2vcq:B (1.95) BS02 D25 2.5.1.18
    5.3.99.2    		 GO:0000287 ... O60760 18341273 MOAD: ic50=0.92uM
    PDBbind: -logKd/Ki=6.04, IC50=0.92uM
    BindingDB: IC50=920nM
    5847 2vcw:B (1.95) BS02 ZZA 2.5.1.18
    5.3.99.2    		 GO:0000287 ... O60760 18341273 MOAD: ic50=890uM
    PDBbind: -logKd/Ki=3.05, IC50=890uM
    BindingDB: Kd=140000nM, IC50=890000nM
    5848 2vcx:B (2.1) BS02 D26 2.5.1.18
    5.3.99.2    		 GO:0000287 ... O60760 18341273 MOAD: ic50=0.021uM
    PDBbind: -logKd/Ki=7.68, IC50=0.021uM
    BindingDB: Kd=51nM, IC50=21nM, EC50=110nM
    5849 2vd0:B (2.2) BS01 D27 2.5.1.18
    5.3.99.2    		 GO:0000287 ... O60760 18341273 MOAD: ic50=11.6uM
    PDBbind: -logKd/Ki=4.94, IC50=11.6uM
    BindingDB: IC50=11600nM
    5850 2vd1:B (2.25) BS01 D28 2.5.1.18
    5.3.99.2    		 GO:0000287 ... O60760 18341273 MOAD: ic50=0.138uM
    PDBbind: -logKd/Ki=6.86, IC50=0.138uM
    BindingDB: IC50=94600nM
    5851 2vd4:A (1.9) BS01 P21 2.3.1.157
    2.7.7.23    		 GO:0000287 ... P43889 18218712 MOAD: ic50=18uM
    PDBbind: -logKd/Ki=4.74, IC50=18uM
    5852 2vd7:A (2.25) BS02 PD2 1.14.11.66
    1.14.11.69    		 N/A O75164 18942826 PDBbind: -logKd/Ki=5.38, IC50=4.2uM
    BindingDB: IC50=4200nM
    5853 2ves:A (1.9) BS02 GVR 3.5.1.108 GO:0006796 ... P47205 18287278 PDBbind: -logKd/Ki=7.70, Ki=20nM
    5854 2ves:C (1.9) BS03 GVR 3.5.1.108 GO:0006796 ... P47205 18287278 PDBbind: -logKd/Ki=7.70, Ki=20nM
    5855 2veu:A (2.4) BS01 IZ1 3.1.3.48 GO:0004725 ... P18031 18037290 MOAD: ic50=100nM
    PDBbind: -logKd/Ki=7.00, IC50=100nM
    5856 2vev:A (1.8) BS01 IZ2 3.1.3.48 GO:0004725 ... P18031 18037290 MOAD: ic50=300nM
    PDBbind: -logKd/Ki=6.52, IC50=300nM
    5857 2vew:A (2.0) BS01 IZ3 3.1.3.48 GO:0004725 ... P18031 18037290 MOAD: ic50=64nM
    PDBbind: -logKd/Ki=7.19, IC50=64nM
    5858 2vex:A (2.2) BS01 IZ4 3.1.3.48 GO:0004725 ... P18031 18037290 MOAD: ic50=130nM
    PDBbind: -logKd/Ki=6.74, IC50=180nM
    5859 2vey:A (2.2) BS01 IZ5 3.1.3.48 GO:0004725 ... P18031 18037290 MOAD: ic50=43nM
    PDBbind: -logKd/Ki=7.37, IC50=43nM
    5860 2vf6:A (2.1) BS01 M0N 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 N/A PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3nM
    5861 2vfk:A (1.5) BS01 AMP N/A N/A N/A 18082768 MOAD: Kd=194uM
    PDBbind: -logKd/Ki=3.71, Kd=194uM
    5862 2vfz:A (2.4) BS01 UPF 2.4.1.87 GO:0005975 ... P14769 17493636 MOAD: Ki=245uM
    PDBbind: -logKd/Ki=3.61, Ki=245uM
    5863 2vgc:C (1.8) BS02 V35 3.4.21.1 GO:0004252 ... P00766 9425066 PDBbind: -logKd/Ki=5.24, Ki=5.76uM
    5864 2vgo:A (1.7) BS01 AD5 2.7.11.1 GO:0004672 ... Q6DE08 18483302 MOAD: ic50=500nM
    PDBbind: -logKd/Ki=6.30, IC50=500nM
    5865 2vgp:A (1.7) BS01 AD6 2.7.11.1 GO:0004672 ... Q6DE08 18307303 MOAD: ic50=577nM
    PDBbind: -logKd/Ki=6.85, IC50=0.14uM
    5866 2vh0:A (1.7) BS03 GSI 3.4.21.6 GO:0004252 ... P00742 18053714 MOAD: Ki<1nM
    PDBbind: -logKd/Ki=8.51, Ki=3.1nM
    5867 2vh6:A (1.95) BS01 GSV 3.4.21.6 GO:0004252 ... P00742 18054228 MOAD: Ki=0.2nM
    PDBbind: -logKd/Ki=9.70, Ki=0.2nM
    5868 2vhj:A (1.8) BS01 ADP ? GO:0005524 ... Q94M05 18057007 PDBbind: -logKd/Ki=3.90, Kd=125uM
    5869 2vhj:A (1.8) BS02 ADP ? GO:0005524 ... Q94M05 18057007 PDBbind: -logKd/Ki=3.90, Kd=125uM
    5870 2vhq:A (2.15) BS01 ATP ? GO:0005524 ... Q94M05 18057007 PDBbind: -logKd/Ki=3.85, Kd=140uM
    5871 2vhq:A (2.15) BS02 ATP ? GO:0005524 ... Q94M05 18057007 PDBbind: -logKd/Ki=3.85, Kd=140uM
    5872 2vi5:A (2.3) BS01 Y19 2.5.1.78 GO:0000906 ... P9WHE9 18331058 MOAD: Ki=110uM
    PDBbind: -logKd/Ki=3.96, Ki=110uM
    5873 2vi5:A (2.3) BS02 Y19 2.5.1.78 GO:0000906 ... P9WHE9 18331058 MOAD: Ki=110uM
    PDBbind: -logKd/Ki=3.96, Ki=110uM
    5874 2vi5:B (2.3) BS01 Y19 2.5.1.78 GO:0000906 ... P9WHE9 18331058 MOAD: Ki=110uM
    PDBbind: -logKd/Ki=3.96, Ki=110uM
    5875 2vi5:B (2.3) BS02 Y19 2.5.1.78 GO:0000906 ... P9WHE9 18331058 MOAD: Ki=110uM
    PDBbind: -logKd/Ki=3.96, Ki=110uM
    5876 2vie:A (1.9) BS01 VG0 3.4.23.46 GO:0004190 ... P56817 18166458 MOAD: ic50=33nM
    PDBbind: -logKd/Ki=7.48, IC50=33nM
    BindingDB: IC50=210nM
    5877 2vin:A (1.9) BS01 505 3.4.21.73 GO:0004252 ... P00749 18163548 MOAD: ic50>1mM
    PDBbind: -logKd/Ki=3.00, IC50=1mM
    BindingDB: IC50=>1000000nM
    5878 2vio:A (1.8) BS01 L1O 3.4.21.73 GO:0004252 ... P00749 18163548 MOAD: ic50=40uM
    PDBbind: -logKd/Ki=4.40, IC50=40uM
    BindingDB: IC50=40000nM
    5879 2vip:A (1.72) BS01 L1R 3.4.21.73 GO:0004252 ... P00749 18163548 MOAD: ic50=5.2uM
    PDBbind: -logKd/Ki=5.28, IC50=5.2uM
    BindingDB: IC50=5200nM
    5880 2viq:A (2.0) BS01 D55 3.4.21.73 GO:0004252 ... P00749 18163548 MOAD: ic50=1.3uM
    PDBbind: -logKd/Ki=5.89, IC50=1.3uM
    BindingDB: IC50=1300nM
    5881 2viv:A (1.72) BS01 VG2 3.4.21.73 GO:0004252 ... P00749 18163548 MOAD: ic50=520nM
    PDBbind: -logKd/Ki=6.28, IC50=520nM
    BindingDB: IC50=520nM
    5882 2viw:A (2.05) BS01 D56 3.4.21.73 GO:0004252 ... P00749 18163548 MOAD: ic50=72nM
    PDBbind: -logKd/Ki=7.14, IC50=72nM
    BindingDB: IC50=72nM
    5883 2viy:A (1.82) BS01 VG3 3.4.23.46 GO:0004190 ... P56817 18171614 MOAD: ic50=1.8uM
    PDBbind: -logKd/Ki=5.74, IC50=1.8uM
    5884 2viz:A (1.6) BS01 VG4 3.4.23.46 GO:0004190 ... P56817 18171614 MOAD: ic50=605nM
    PDBbind: -logKd/Ki=6.22, IC50=605nM
    5885 2vj1:B (2.25) BS01 XP1 2.1.1.-
    2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0C6X7 18559270 PDBbind: -logKd/Ki=5.30, IC50=5uM
    BindingDB: Ki=1380nM
    5886 2vj6:A (1.8) BS01 VG5 3.4.23.46 GO:0004190 ... P56817 18166458 MOAD: ic50=13nM
    PDBbind: -logKd/Ki=7.89, IC50=13nM
    BindingDB: IC50=310nM
    5887 2vj7:A (1.6) BS01 VG6 3.4.23.46 GO:0004190 ... P56817 18166458 MOAD: ic50=40nM
    PDBbind: -logKd/Ki=7.40, IC50=40nM
    BindingDB: IC50=200nM
    5888 2vj8:A (1.8) BS02 HA2 3.3.2.6
    3.4.11.4    		 GO:0003723 ... P09960 12207002 MOAD: Ki=0.002uM
    PDBbind: -logKd/Ki=8.70, Ki=2nM
    5889 2vj9:A (1.6) BS01 VG7 3.4.23.46 GO:0004190 ... P56817 18166458 MOAD: ic50=180nM
    PDBbind: -logKd/Ki=6.74, IC50=180nM
    BindingDB: IC50=180nM
    5890 2vjx:A (1.85) BS01 IFL 3.2.1.25 GO:0004553 ... Q8AAK6 18408714 MOAD: Ki=11uM
    PDBbind: -logKd/Ki=4.96, Ki=11uM
    BindingDB: Ki=1.1e+4nM
    5891 2vk2:A (1.2) BS01 GZL ? GO:0005534 ... P39325 19744923 MOAD: Kd=0.13uM
    PDBbind: -logKd/Ki=6.89, Kd=0.13uM
    5892 2vk6:A (1.5) BS02 DAN 3.2.1.18 GO:0004308 ... Q59310 18218621 PDBbind: -logKd/Ki=5.30, Ki=5uM
    5893 2vkm:A (2.05) BS01 BSD 3.4.23.46 GO:0004190 ... P56817 18180160 MOAD: Ki=1.8nM
    PDBbind: -logKd/Ki=8.74, Ki=1.8nM
    BindingDB: IC50=1nM, Ki=1.8nM
    5894 2vl4:A (1.9) BS01 MNM 3.2.1.25 GO:0004553 ... Q8AAK6 18408714 MOAD: Ki=975nM
    PDBbind: -logKd/Ki=6.01, Ki=975nM
    5895 2vl8:A (2.31) BS01 UDP 2.4.1.-
    3.4.22.-    		 GO:0016757 ... Q46342 18505687 PDBbind: -logKd/Ki=4.52, IC50=30uM
    5896 2vla:A (1.3) BS01 dna 3.1.21.4 N/A A3FMN7 18433771 PDBbind: Kd=7.3nM
    5897 2vla:A (1.3) BS02 dna 3.1.21.4 N/A A3FMN7 18433771 PDBbind: Kd=7.3nM
    5898 2vle:A (2.4) BS01 DZN 1.2.1.3 GO:0004029 ... P05091 18613661 PDBbind: -logKd/Ki=7.10, IC50=80nM
    BindingDB: IC50=80nM
    5899 2vle:B (2.4) BS01 DZN 1.2.1.3 GO:0004029 ... P05091 18613661 PDBbind: -logKd/Ki=7.10, IC50=80nM
    BindingDB: IC50=80nM
    5900 2vmc:A (1.9) BS02 NGA ? GO:0005737 ... P42530 18384150 PDBbind: -logKd/Ki=2.94, Kd=1.15mM
    5901 2vmd:A (1.9) BS02 MBG ? GO:0005737 ... P42530 18384150 MOAD: Kd=0.95mM
    PDBbind: -logKd/Ki=3.02, Kd=0.95mM
    5902 2vmf:A (2.1) BS01 MVL 3.2.1.25 GO:0004553 ... Q8AAK6 18408714 MOAD: Ki=1400nM
    PDBbind: -logKd/Ki=5.85, Kd=1400nM
    BindingDB: Ki=1400nM
    5903 2vnm:A (1.79) BS01 CM8 3.4.23.46 GO:0004190 ... P56817 18457381 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3nM
    5904 2vnm:A (1.79) BS02 CM8 3.4.23.46 GO:0004190 ... P56817 18457381 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3nM
    5905 2vnn:A (1.87) BS01 CM7 3.4.23.46 GO:0004190 ... P56817 18457381 MOAD: ic50=2nM
    PDBbind: -logKd/Ki=8.70, IC50=2nM
    BindingDB: IC50=2nM
    5906 2vnp:A (2.19) BS03 DED 5.3.3.2 GO:0000287 ... Q46822 18391416 MOAD: Ki=0.12nM
    PDBbind: -logKd/Ki=9.92, Ki=0.12nM
    5907 2vnt:A (2.2) BS01 QGG 3.4.21.73 GO:0004252 ... P00749 17447747 MOAD: Ki=9.9nM
    PDBbind: -logKd/Ki=8.00, Ki=9.9nM
    BindingDB: Ki=9.9nM
    5908 2vo4:A (1.75) BS02 4NM 2.5.1.18 GO:0004364 ... O49235 19014949 PDBbind: -logKd/Ki=4.94, Kd=11.6uM
    5909 2vo5:A (2.3) BS01 VBZ 3.2.1.25 GO:0004553 ... Q8AAK6 18408714 MOAD: Ki=13uM
    PDBbind: -logKd/Ki=4.89, Ki=13uM
    BindingDB: Ki=1.3e+4nM
    5910 2vo7:A (1.98) BS02 M05 2.7.11.11 GO:0001669 ... P00517 18345609 MOAD: ic50=168nM
    PDBbind: -logKd/Ki=6.77, IC50=168nM
    5911 2vo7:A (1.98) BS03 M05 2.7.11.11 GO:0001669 ... P00517 18345609 MOAD: ic50=168nM
    PDBbind: -logKd/Ki=6.77, IC50=168nM
    5912 2vot:A (1.95) BS01 NHV 3.2.1.25 GO:0004553 ... Q8AAK6 18408714 MOAD: Ki=72nM
    PDBbind: -logKd/Ki=7.14, Ki=72nM
    5913 2vpl:A (2.3) BS01 rna ? N/A P27150 18778715 PDBbind: Kd=45.4nM
    5914 2vpl:C (2.3) BS01 rna ? N/A P27150 18778715 PDBbind: Kd=45.4nM
    5915 2vpn:A (1.55) BS01 4CS ? GO:0042597 ... E1VBK1 18702523 MOAD: Kd=0.19uM
    PDBbind: -logKd/Ki=6.72, Kd=0.19uM
    5916 2vpo:A (1.8) BS01 6CS ? GO:0042597 ... E1VBK1 18702523 MOAD: Kd=3.8uM
    PDBbind: -logKd/Ki=5.42, Kd=3.8uM
    5917 2vpp:A (2.2) BS01 GEO 2.7.1.145 GO:0004136 ... Q9XZT6 19285960 PDBbind: -logKd/Ki=6.12, IC50=0.76uM
    5918 2vqj:A (2.1) BS01 TFG 3.5.1.98 N/A P56524 18614528 PDBbind: -logKd/Ki=6.44, IC50=367nM
    5919 2vqm:A (1.8) BS01 HA3 3.5.1.98 N/A P56524 18614528 MOAD: ic50=978nM
    PDBbind: -logKd/Ki=6.01, IC50=978nM
    5920 2vqt:A (2.1) BS01 15A 3.2.1.25 GO:0004553 ... Q8AAK6 18408714 MOAD: Ki=1uM
    PDBbind: -logKd/Ki=6.00, Ki=1.0uM
    5921 2vr0:C (2.8) BS05 HQO 1.10.2.- GO:0005886 ... Q72EF4 18597779 PDBbind: -logKd/Ki=4.42, Ki=38uM
    5922 2vr4:A (1.8) BS01 17B 3.2.1.25 GO:0004553 ... Q8AAK6 18408714 MOAD: Ki=2.1uM
    PDBbind: -logKd/Ki=5.68, Ki=2.1uM
    5923 2vrj:A (1.9) BS01 NCW 3.2.1.21 GO:0004553 ... Q08638 18833549 MOAD: Kd=0.5uM
    PDBbind: -logKd/Ki=6.30, Kd=0.5uM
    5924 2vrx:A (1.86) BS01 447 2.7.11.1 GO:0004672 ... Q6DE08 18559266 PDBbind: -logKd/Ki=7.35, IC50=45nM
    BindingDB: IC50=45nM
    5925 2vt3:A (2.0) BS01 ATP ? GO:0003677 ... O05521 18485070 PDBbind: -logKd/Ki=4.15, Kd=0.07mM
    5926 2vt3:B (2.0) BS01 ATP ? GO:0003677 ... O05521 18485070 PDBbind: -logKd/Ki=4.15, Kd=0.07mM
    5927 2vta:A (2.0) BS01 LZ1 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=185uM
    PDBbind: -logKd/Ki=3.73, IC50=185uM
    BindingDB: IC50=185000nM
    5928 2vtd:A (1.94) BS01 LKM 6.3.2.9 GO:0005515 ... P14900 19007109 MOAD: ic50=85uM
    PDBbind: -logKd/Ki=4.07, IC50=85uM
    BindingDB: Kd=7000nM, IC50=85000nM
    5929 2vte:A (2.2) BS01 IK4 6.3.2.9 GO:0005515 ... P14900 19007109 MOAD: ic50=122uM
    PDBbind: -logKd/Ki=3.91, IC50=122uM
    BindingDB: IC50=122000nM
    5930 2vth:A (1.9) BS01 LZ2 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=120uM
    PDBbind: -logKd/Ki=3.92, IC50=120uM
    BindingDB: IC50=120000nM
    5931 2vti:A (2.0) BS01 LZ3 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=0.66uM
    PDBbind: -logKd/Ki=6.18, IC50=660nM
    BindingDB: IC50=660nM
    5932 2vtj:A (2.2) BS01 LZ4 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=1.9uM
    PDBbind: -logKd/Ki=5.72, IC50=1.9uM
    BindingDB: IC50=9100nM
    5933 2vtl:A (2.0) BS01 LZ5 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=97uM
    PDBbind: -logKd/Ki=4.01, IC50=97uM
    BindingDB: IC50=97000nM
    5934 2vtm:A (2.25) BS01 LZM 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50~1mM
    PDBbind: -logKd/Ki=3.00, IC50=1mM
    5935 2vtn:A (2.2) BS01 LZ7 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=0.85uM
    PDBbind: -logKd/Ki=6.07, IC50=850nM
    BindingDB: IC50=850nM
    5936 2vto:A (2.19) BS01 LZ8 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=0.14uM
    PDBbind: -logKd/Ki=6.85, IC50=140nM
    BindingDB: IC50=140nM
    5937 2vtp:A (2.15) BS01 LZ9 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=0.003uM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3.0nM
    5938 2vtq:A (1.9) BS01 LZA 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=0.14uM
    PDBbind: -logKd/Ki=6.85, IC50=140nM
    BindingDB: IC50=140nM
    5939 2vtr:A (1.89) BS01 LZB 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=1.5uM
    PDBbind: -logKd/Ki=5.82, IC50=1.5uM
    BindingDB: IC50=1500nM
    5940 2vts:A (1.9) BS01 LZC 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=0.03uM
    PDBbind: -logKd/Ki=7.52, IC50=30nM
    BindingDB: IC50=30nM
    5941 2vtt:A (1.68) BS01 LZD 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=0.044uM
    PDBbind: -logKd/Ki=7.36, IC50=44nM
    BindingDB: IC50=44nM
    5942 2vu3:A (1.85) BS01 LZE 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=0.047uM
    PDBbind: -logKd/Ki=7.33, IC50=47nM
    BindingDB: IC50=47nM, Ki=510nM, Kd=30nM
    5943 2vuk:B (1.5) BS01 P83 ? GO:0000976 ... P04637 18650397 MOAD: Kd=125uM
    PDBbind: -logKd/Ki=3.90, Kd=125uM
    BindingDB: Kd=140000nM
    5944 2vur:A (2.2) BS01 YX1 3.2.1.169 N/A Q0TR53 18721751 MOAD: ic50=30uM
    PDBbind: -logKd/Ki=4.52, IC50=30uM
    5945 2vv9:A (1.9) BS01 IM9 2.7.11.22 GO:0000082 ... P24941 18617397 MOAD: ic50=0.017uM
    PDBbind: -logKd/Ki=7.77, IC50=0.017uM
    BindingDB: IC50=17nM
    5946 2vvc:A (1.95) BS01 LZF 3.4.21.6 GO:0004252 ... P00742 19200624 PDBbind: -logKd/Ki=8.52, Ki=3nM
    BindingDB: Ki=3nM
    5947 2vvn:A (1.85) BS01 NHT 3.2.1.169 N/A Q89ZI2 18587388 PDBbind: -logKd/Ki=7.30, Kd=50nM
    5948 2vvo:A (1.85) BS01 A6P 5.3.1.6 GO:0004751 ... P9WKD7 18640127 MOAD: ic50=6.3mM
    PDBbind: -logKd/Ki=2.20, IC50=6.3mM
    5949 2vvo:A (1.85) BS02 A6P 5.3.1.6 GO:0004751 ... P9WKD7 18640127 MOAD: ic50=6.3mM
    PDBbind: -logKd/Ki=2.20, IC50=6.3mM
    5950 2vvo:B (1.85) BS01 A6P 5.3.1.6 GO:0004751 ... P9WKD7 18640127 MOAD: ic50=6.3mM
    PDBbind: -logKd/Ki=2.20, IC50=6.3mM
    5951 2vvo:B (1.85) BS02 A6P 5.3.1.6 GO:0004751 ... P9WKD7 18640127 MOAD: ic50=6.3mM
    PDBbind: -logKd/Ki=2.20, IC50=6.3mM
    5952 2vvs:A (2.24) BS01 OAN 3.2.1.169 N/A Q89ZI2 18842583 MOAD: Ki=46nM
    PDBbind: -logKd/Ki=7.34, Ki=46nM
    5953 2vvt:A (1.65) BS01 I24 5.1.1.3 GO:0008360 ... Q836J0 18614367 MOAD: ic50=5.8uM
    PDBbind: -logKd/Ki=5.24, IC50=5.8uM
    BindingDB: IC50=5800nM
    5954 2vvu:A (2.3) BS01 H22 3.4.21.6 GO:0004252 ... P00742 19200624 PDBbind: -logKd/Ki=8.10, Ki=8nM
    BindingDB: Ki=8nM
    5955 2vvv:A (1.73) BS01 H21 3.4.21.6 GO:0004252 ... P00742 19200624 PDBbind: -logKd/Ki=8.22, Ki=6nM
    BindingDB: Ki=6nM
    5956 2vw1:A (2.39) BS01 DAN 3.2.1.18 GO:0004308 ... Q54727 18835278 MOAD: Ki=0.3mM
    PDBbind: -logKd/Ki=3.52, Ki=0.3mM
    5957 2vw2:A (1.7) BS01 NHE 3.2.1.18 GO:0004308 ... Q54727 18835278 PDBbind: -logKd/Ki=3.30, Ki=0.5mM
    5958 2vw2:A (1.7) BS02 NHE 3.2.1.18 GO:0004308 ... Q54727 18835278 PDBbind: -logKd/Ki=3.30, Ki=0.5mM
    5959 2vw5:A (1.9) BS01 BC6 ? GO:0005524 ... P02829 18800759 MOAD: Kd=3nM
    PDBbind: -logKd/Ki=8.52, Kd=3nM
    5960 2vwc:A (2.4) BS01 BC2 ? GO:0005524 ... P02829 18357975 MOAD: Kd=0.24uM
    PDBbind: -logKd/Ki=6.62, Kd=0.24uM
    5961 2vwj:A (2.78) BS01 dna 2.7.7.7 GO:0000166 ... P56689 18614176 PDBbind: Kd=8nM
    5962 2vwl:A (1.8) BS01 LZH 3.4.21.6 GO:0004252 ... P00742 19200624 PDBbind: -logKd/Ki=7.02, Ki=95nM
    BindingDB: Ki=95nM
    5963 2vwm:A (1.96) BS01 LZI 3.4.21.6 GO:0004252 ... P00742 19200624 PDBbind: -logKd/Ki=7.03, Ki=93nM
    BindingDB: Ki=93nM
    5964 2vwn:A (1.61) BS01 H25 3.4.21.6 GO:0004252 ... P00742 19200624 PDBbind: -logKd/Ki=8.00, Ki=10nM
    BindingDB: Ki=10nM
    5965 2vwo:A (1.6) BS01 LZG 3.4.21.6 GO:0004252 ... P00742 19200624 PDBbind: -logKd/Ki=7.51, Ki=31nM
    BindingDB: Ki=31nM
    5966 2vwu:A (2.0) BS01 7X1 2.7.10.1 GO:0004672 ... P54760 18434142 MOAD: ic50=0.35uM
    PDBbind: -logKd/Ki=6.46, IC50=0.35uM
    BindingDB: IC50=350nM
    5967 2vwv:A (1.9) BS01 7X3 2.7.10.1 GO:0004672 ... P54760 18434142 MOAD: ic50=16uM
    PDBbind: -logKd/Ki=4.80, IC50=16uM
    BindingDB: IC50=16000nM
    5968 2vww:A (1.9) BS01 7X2 2.7.10.1 GO:0004672 ... P54760 18434142 MOAD: ic50=0.24uM
    PDBbind: -logKd/Ki=6.62, IC50=0.24uM
    BindingDB: IC50=240nM
    5969 2vwx:A (1.65) BS01 7X4 2.7.10.1 GO:0004672 ... P54760 18851911 MOAD: ic50=0.04uM
    PDBbind: -logKd/Ki=7.40, IC50=0.04uM
    BindingDB: IC50=40nM
    5970 2vwy:A (1.65) BS01 7X5 2.7.10.1 GO:0004672 ... P54760 18851911 MOAD: ic50=0.09uM
    PDBbind: -logKd/Ki=7.05, IC50=0.09uM
    BindingDB: IC50=90nM
    5971 2vwz:A (1.65) BS01 7X6 2.7.10.1 GO:0004672 ... P54760 18851911 MOAD: ic50=0.794uM
    PDBbind: -logKd/Ki=6.10, IC50=0.794uM
    BindingDB: IC50=741nM
    5972 2vx0:A (2.1) BS01 7X7 2.7.10.1 GO:0004672 ... P54760 18434142 MOAD: ic50=0.58uM
    PDBbind: -logKd/Ki=6.24, IC50=0.58uM
    BindingDB: IC50=580nM
    5973 2vx1:A (1.65) BS01 7X8 2.7.10.1 GO:0004672 ... P54760 18851911 MOAD: ic50=0.22uM
    PDBbind: -logKd/Ki=6.66, IC50=0.220uM
    BindingDB: IC50=900nM
    5974 2vx9:A (1.65) BS01 RBF ? GO:0005737 ... B0R5M0 19224924 PDBbind: -logKd/Ki=7.44, Kd=36nM
    5975 2vxa:A (2.6) BS01 RBF ? GO:0000166 ... A1WUH0 19224924 PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    5976 2vxa:A (2.6) BS02 RBF ? GO:0000166 ... A1WUH0 19224924 PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    5977 2vxa:C (2.6) BS01 RBF ? GO:0000166 ... A1WUH0 19224924 PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    5978 2vxa:C (2.6) BS02 RBF ? GO:0000166 ... A1WUH0 19224924 PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    5979 2vxa:E (2.6) BS01 RBF ? GO:0000166 ... A1WUH0 19224924 PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    5980 2vxa:E (2.6) BS02 RBF ? GO:0000166 ... A1WUH0 19224924 PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    5981 2vxa:F (2.6) BS01 RBF ? GO:0000166 ... A1WUH0 19224924 PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    5982 2vxa:F (2.6) BS02 RBF ? GO:0000166 ... A1WUH0 19224924 PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    5983 2vxn:A (0.82) BS01 PGH 5.3.1.1 GO:0004807 ... P48499 20235230 PDBbind: -logKd/Ki=5.00, Kd=10uM
    5984 2vy1:A (2.104) BS01 dna ? GO:0003677 ... Q00958 18784751 PDBbind: Kd=95nM
    5985 2vye:A (4.1) BS01 dna 3.6.4.12 GO:0003677 ... Q5KU75 19074952 PDBbind: Kd=46.9nM
    5986 2vye:B (4.1) BS01 dna 3.6.4.12 GO:0003677 ... Q5KU75 19074952 PDBbind: Kd=46.9nM
    5987 2vyt:A (1.9) BS01 MLZ ? GO:0005634 ... Q9UQR0 18706910 MOAD: Kd=1.84mM
    PDBbind: -logKd/Ki=2.74, Kd=1.84mM
    5988 2vzr:A (1.95) BS02 GCU 3.2.1.165 GO:0030246 ... Q56F26 19218457 MOAD: Ka=19000M^-1
    PDBbind: -logKd/Ki=4.28, Kd=52.6uM
    5989 2w05:A (1.9) BS01 FRT 2.7.11.22 GO:0000082 ... P24941 18815031 MOAD: ic50=0.001uM
    PDBbind: -logKd/Ki=9.00, IC50=1nM
    BindingDB: IC50=1nM
    5990 2w06:A (2.04) BS01 FRV 2.7.11.22 GO:0000082 ... P24941 18815031 PDBbind: -logKd/Ki=7.08, IC50=83nM
    5991 2w08:A (1.7) BS03 TPO ? GO:0001849 ... P02743 19372378 MOAD: Kd=380uM
    PDBbind: -logKd/Ki=3.42, Kd=380uM
    5992 2w0d:A (2.0) BS06 CGS 3.4.24.65 GO:0004222 ... P39900 19239231 MOAD: ic50~2nM
    PDBbind: -logKd/Ki=8.70, IC50=2.0nM
    5993 2w0d:A (2.0) BS07 CGS 3.4.24.65 GO:0004222 ... P39900 19239231 MOAD: ic50~2nM
    PDBbind: -logKd/Ki=8.70, IC50=2.0nM
    5994 2w0j:A (2.05) BS01 ZAT 2.7.11.1 GO:0004672 ... O96017 19177354 MOAD: ic50=240nM
    PDBbind: -logKd/Ki=6.62, IC50=240nM
    5995 2w0s:A (2.918) BS03 BVP 2.7.4.9 GO:0004550 ... P68693 18971333 PDBbind: -logKd/Ki=3.30, Kd=0.5mM
    5996 2w0x:A (2.12) BS02 PD2 1.14.11.30
    1.14.11.n4    		 GO:0003714 ... Q9NWT6 20822901 MOAD: ic50=625uM
    PDBbind: -logKd/Ki=3.20, IC50=625uM
    BindingDB: IC50=8600nM
    5997 2w12:A (1.46) BS02 WR2 3.4.24.- GO:0004222 ... P83512 19485419 PDBbind: -logKd/Ki=4.65, IC50=22.2uM
    5998 2w17:A (2.15) BS01 I19 2.7.11.22 GO:0000082 ... P24941 18996007 MOAD: ic50=0.002uM
    PDBbind: -logKd/Ki=8.70, IC50=2nM
    BindingDB: IC50=2nM
    5999 2w1c:A (3.24) BS01 L0C 2.7.11.1 GO:0004672 ... O14965 19143567 PDBbind: -logKd/Ki=8.00, IC50=0.01uM
    6000 2w1d:A (2.97) BS01 L0D 2.7.11.1 GO:0004672 ... O14965 19143567 PDBbind: -logKd/Ki=6.04, IC50=0.91uM
    BindingDB: IC50=910nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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