Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    2401 1r0x:A (2.2) BS02 ATP 5.6.1.6 GO:0005524 ... P26361 14685259 MOAD: Kd=149uM
    PDBbind: -logKd/Ki=3.83, Kd=149uM
    2402 1r10:A (3.0) BS02 ATP 5.6.1.6 GO:0005524 ... P26361 14685259 PDBbind: -logKd/Ki=3.83, Kd=149uM
    2403 1r1h:A (1.95) BS02 BIR 3.4.24.11 GO:0001786 ... P08473 14747736 MOAD: Ki=1.2nM
    PDBbind: -logKd/Ki=8.92, Ki=1.2nM
    2404 1r1i:A (2.6) BS02 TI1 3.4.24.11 GO:0001786 ... P08473 14747736 PDBbind: -logKd/Ki=8.54, Ki=2.9nM
    2405 1r1j:A (2.35) BS02 OIR 3.4.24.11 GO:0001786 ... P08473 14747736 MOAD: Ki=2.3nM
    PDBbind: -logKd/Ki=8.64, Ki=2.3nM
    2406 1r4w:A (2.5) BS01 GSH 2.5.1.18 GO:0004364 ... P24473 14717589 MOAD: Kd=90uM
    PDBbind: -logKd/Ki=4.05, Kd=90uM
    2407 1r4w:B (2.5) BS01 GSH 2.5.1.18 GO:0004364 ... P24473 14717589 MOAD: Kd=90uM
    PDBbind: -logKd/Ki=4.05, Kd=90uM
    2408 1r58:A (1.9) BS03 AO5 3.4.11.18 GO:0006508 ... P50579 15012983 PDBbind: -logKd/Ki=6.96, IC50=0.11uM
    BindingDB: IC50=110nM
    2409 1r5g:A (2.0) BS03 AO1 3.4.11.18 GO:0006508 ... P50579 15012983 PDBbind: -logKd/Ki=7.52, IC50=0.03uM
    BindingDB: IC50=22nM
    2410 1r5h:A (2.4) BS03 AO2 3.4.11.18 GO:0006508 ... P50579 15012983 MOAD: ic50=0.17uM
    PDBbind: -logKd/Ki=6.74, IC50=0.18uM
    BindingDB: IC50=170nM
    2411 1r5n:A (2.9) BS01 GDP 3.6.5.- GO:0000288 ... O74718 15099522 PDBbind: -logKd/Ki=5.42, Kd=3.8uM
    2412 1r5y:A (1.2) BS02 DQU 2.4.2.29 GO:0002099 ... P28720 15050823 MOAD: Ki=0.35uM
    PDBbind: -logKd/Ki=6.46, Ki=0.35uM
    2413 1r6g:A (3.0) BS01 442 ? GO:0003677 ... P10828 15177471 PDBbind: -logKd/Ki=9.21, IC50=0.62nM
    2414 1r6n:A (2.4) BS01 434 ? GO:0006275 ... P04015 14634007 MOAD: Kd=40nM
    PDBbind: -logKd/Ki=7.40, Kd=40nM
    2415 1r6n:A (2.4) BS02 434 ? GO:0006275 ... P04015 14634007 MOAD: Kd=40nM
    PDBbind: -logKd/Ki=7.40, Kd=40nM
    2416 1r78:A (2.0) BS01 FMD 2.7.11.22 GO:0000082 ... P24941 15012993 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3nM
    2417 1r8d:A (2.7) BS01 dna ? GO:0003677 ... P71039 14985361 PDBbind: Kd=96nM
    2418 1r8d:A (2.7) BS02 dna ? GO:0003677 ... P71039 14985361 PDBbind: Kd=96nM
    2419 1r8d:B (2.7) BS01 dna ? GO:0003677 ... P71039 14985361 PDBbind: Kd=96nM
    2420 1r8d:B (2.7) BS02 dna ? GO:0003677 ... P71039 14985361 PDBbind: Kd=96nM
    2421 1r8e:A (2.4) BS01 dna ? GO:0003677 ... P39075 14985361 PDBbind: Kd=2.4nM
    2422 1rbo:L (2.3) BS01 CAP 4.1.1.39 GO:0000287 ... P00875 8955130 MOAD: Kd=0.19pM
    PDBbind: -logKd/Ki=12.72, Kd=0.19pM
    2423 1rbp:A (2.0) BS01 RTL ? GO:0001654 ... P02753 2217163 MOAD: Kd=0.19uM
    PDBbind: -logKd/Ki=6.72, Kd=0.19uM
    2424 1rd4:A (2.4) BS01 L08 ? N/A P20701 14992576 MOAD: Kd=18.3nM
    PDBbind: -logKd/Ki=7.74, Kd=18.3nM
    BindingDB: Kd=18nM
    2425 1rdi:1 (1.8) BS01 MFU ? N/A P08661 8557671 MOAD: Ki=8.8mM
    PDBbind: -logKd/Ki=2.06, Ki=8.8mM
    2426 1rdj:1 (1.8) BS01 MFB ? N/A P08661 8557671 MOAD: Ki=21.7mM
    PDBbind: -logKd/Ki=1.66, Ki=21.7mM
    2427 1rdl:1 (1.7) BS01 MMA ? N/A P08661 8557671 MOAD: Ki=5.7mM
    PDBbind: -logKd/Ki=2.24, Ki=5.7mM
    2428 1rdt:A (2.4) BS02 L79 ? GO:0003677 ... P19793 15056000 MOAD: Ki=6nM
    PDBbind: -logKd/Ki=6.70, Ki=200nM
    2429 1re1:A (2.5) BS01 NA3 3.4.22.56 GO:0004197 ... P42574 15115390 PDBbind: -logKd/Ki=5.21, IC50=6117nM
    BindingDB: IC50=6000nM
    2430 1re1:B (2.5) BS01 NA3 3.4.22.56 GO:0004197 ... P42574 15115390 PDBbind: -logKd/Ki=5.21, IC50=6117nM
    BindingDB: IC50=6000nM
    2431 1re8:A (2.1) BS01 BD2 2.7.11.11 GO:0000122 ... P05132 14705934 MOAD: Ki=0.3nM
    PDBbind: -logKd/Ki=9.52, Ki=0.3nM
    2432 1rej:A (2.2) BS01 B1L 2.7.11.11 GO:0000122 ... P05132 14705934 MOAD: Ki=5nM
    PDBbind: -logKd/Ki=8.30, Ki=5nM
    2433 1rek:A (2.3) BS01 B8L 2.7.11.11 GO:0000122 ... P05132 14705934 MOAD: Ki=200nM
    PDBbind: -logKd/Ki=6.70, Ki=200nM
    2434 1rev:A (2.6) BS01 TB9 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 8535785 PDBbind: -logKd/Ki=7.48, Ki=33nM
    2435 1rgk:A (1.87) BS01 2AM 4.6.1.24 GO:0001411 ... P00651 1350642 MOAD: Kd=49.1uM
    PDBbind: -logKd/Ki=4.31, Kd=49.1uM
    2436 1rgl:A (2.0) BS01 2GP 4.6.1.24 GO:0001411 ... P00651 1350642 MOAD: Kd=37uM
    PDBbind: -logKd/Ki=4.43, Kd=37uM
    2437 1rhm:A (2.5) BS01 NA4 3.4.22.56 GO:0004197 ... P42574 15115390 PDBbind: -logKd/Ki=5.76, IC50=1735nM
    BindingDB: IC50=1735nM
    2438 1rhm:B (2.5) BS01 NA4 3.4.22.56 GO:0004197 ... P42574 15115390 PDBbind: -logKd/Ki=5.76, IC50=1735nM
    BindingDB: IC50=1735nM
    2439 1rhq:A (3.0) BS01 0ZZ 3.4.22.56 GO:0004197 ... P42574 15115390 PDBbind: -logKd/Ki=7.75, IC50=17.7nM
    2440 1rhq:B (3.0) BS01 0ZZ 3.4.22.56 GO:0004197 ... P42574 15115390 PDBbind: -logKd/Ki=7.75, IC50=17.7nM
    2441 1rhr:A (3.0) BS01 CNE 3.4.22.56 GO:0004197 ... P42574 15115390 PDBbind: -logKd/Ki=8.10, IC50=7.95nM
    BindingDB: IC50=8nM
    2442 1rhr:B (3.0) BS01 CNE 3.4.22.56 GO:0004197 ... P42574 15115390 PDBbind: -logKd/Ki=8.10, IC50=7.95nM
    BindingDB: IC50=8nM
    2443 1rhu:A (2.51) BS01 3CY 3.4.22.56 GO:0004197 ... P42574 15115390 PDBbind: -logKd/Ki=8.52, IC50=3.00nM
    BindingDB: IC50=3nM
    2444 1rhu:B (2.51) BS01 3CY 3.4.22.56 GO:0004197 ... P42574 15115390 PDBbind: -logKd/Ki=8.52, IC50=3.00nM
    BindingDB: IC50=3nM
    2445 1rin:A (2.6) BS01 MAN ? GO:0030246 ... P02867 8486683 PDBbind: -logKd/Ki=3.15, Kd=0.7mM
    2446 1rin:B (2.6) BS01 MAN ? GO:0030246 ... P02867 8486683 PDBbind: -logKd/Ki=3.15, Kd=0.7mM
    2447 1riw:B (2.04) BS03 OSC 3.4.21.5 GO:0004252 ... P00734 15137772 PDBbind: -logKd/Ki=7.55, IC50=28nM
    BindingDB: IC50=28nM
    2448 1riw:C (2.04) BS02 OSC 3.4.21.5 GO:0004252 ... P00734 15137772 MOAD: ic50=28nM
    PDBbind: -logKd/Ki=7.55, IC50=28nM
    BindingDB: IC50=28nM
    2449 1rjk:A (1.99) BS02 VDZ ? GO:0003677 ... P13053 15065852 PDBbind: -logKd/Ki=10.00, Ki=0.1nM
    BindingDB: Ki=0.1nM
    2450 1rkj:A (-1.00) BS01 rna ? GO:0003676 ... P08199 15033352 PDBbind: Kd=1.1uM
    2451 1rm8:A (1.8) BS05 BAT 3.4.24.- GO:0004222 ... P51512 14741217 PDBbind: -logKd/Ki=9.00, Ki=1nM
    2452 1rmz:A (1.34) BS06 NGH 3.4.24.65 GO:0004222 ... P39900 15809432 PDBbind: -logKd/Ki=8.00, Kd=10nM
    BindingDB: Ki=4.3nM
    2453 1rne:A (2.4) BS01 C60 3.4.23.15 GO:0004190 ... P00797 1807356 MOAD: ic50=2nM
    PDBbind: -logKd/Ki=8.70, IC50=2nM
    BindingDB: IC50=0.830000nM, Ki=0.7nM
    2454 1rnm:E (2.0) BS01 C5P 4.6.1.18 GO:0003676 ... P61823 N/A PDBbind: -logKd/Ki=3.07, Ki=844.2uM
    2455 1rnt:A (1.9) BS01 2GP 4.6.1.24 GO:0001411 ... P00651 N/A MOAD: Kd=6.5uM
    PDBbind: -logKd/Ki=5.19, Kd=6.5uM
    2456 1ro6:A (2.0) BS03 ROL 3.1.4.53 GO:0004114 ... Q07343 15003452 MOAD: Ki~375nM
    PDBbind: -logKd/Ki=6.46, Ki=350nM
    2457 1ro7:A (1.8) BS01 CSF 2.4.99.- N/A Q9LAK3 14730352 PDBbind: -logKd/Ki=3.18, Ki=657uM
    2458 1ros:A (2.0) BS06 DEO 3.4.24.65 GO:0004222 ... P39900 15289103 MOAD: ic50=0.0017uM
    PDBbind: -logKd/Ki=8.77, IC50=1.7nM
    2459 1rp7:A (2.09) BS02 TZD 1.2.4.1 GO:0000287 ... P0AFG8 14992577 MOAD: Ki>0.003uM
    PDBbind: -logKd/Ki=8.52, Ki=0.003uM
    2460 1rp7:A (2.09) BS03 TZD 1.2.4.1 GO:0000287 ... P0AFG8 14992577 MOAD: Ki>0.003uM
    PDBbind: -logKd/Ki=8.52, Ki=0.003uM
    2461 1rp7:B (2.09) BS01 TZD 1.2.4.1 GO:0000287 ... P0AFG8 14992577 MOAD: Ki>0.003uM
    PDBbind: -logKd/Ki=8.52, Ki=0.003uM
    2462 1rp7:B (2.09) BS03 TZD 1.2.4.1 GO:0000287 ... P0AFG8 14992577 MOAD: Ki>0.003uM
    PDBbind: -logKd/Ki=8.52, Ki=0.003uM
    2463 1rpf:A (2.2) BS01 C3P 4.6.1.18 GO:0003676 ... P61823 7756988 PDBbind: -logKd/Ki=3.99, Ki=103uM
    BindingDB: Ki=103000nM
    2464 1rpj:A (1.8) BS01 ALL ? GO:0015752 ... P39265 10064713 MOAD: Kd=0.33uM
    PDBbind: -logKd/Ki=6.48, Kd=0.33uM
    2465 1rpu:A (2.5) BS01 rna ? GO:0003723 ... Q66104 14697199 PDBbind: Kd=0.17nM
    2466 1rpu:A (2.5) BS02 rna ? GO:0003723 ... Q66104 14697199 PDBbind: Kd=0.17nM
    2467 1rpu:B (2.5) BS01 rna ? GO:0003723 ... Q66104 14697199 PDBbind: Kd=0.17nM
    2468 1rpu:B (2.5) BS02 rna ? GO:0003723 ... Q66104 14697199 PDBbind: Kd=0.17nM
    2469 1rql:B (2.4) BS02 VSO 3.11.1.1 GO:0000287 ... O31156 14670958 MOAD: Ki=1.79mM
    PDBbind: -logKd/Ki=2.75, Ki=1.79mM
    2470 1rr6:A (2.5) BS01 IMH 2.4.2.1 GO:0000255 ... P00491 14982926 PDBbind: -logKd/Ki=10.25, Kd=56pM
    2471 1rri:A (2.0) BS01 A45 4.1.2.25
    5.1.99.8    		 GO:0004150 ... P56740 15027862 MOAD: ic50=1.5uM
    PDBbind: -logKd/Ki=5.82, IC50=1.5uM
    2472 1rrw:A (2.21) BS01 9MG 4.1.2.25
    5.1.99.8    		 GO:0004150 ... P56740 15027862 MOAD: ic50=28uM
    PDBbind: -logKd/Ki=4.55, IC50=28uM
    2473 1rry:A (2.7) BS01 204 4.1.2.25
    5.1.99.8    		 GO:0004150 ... P56740 15027862 PDBbind: -logKd/Ki=4.10, IC50=80uM
    2474 1rs2:A (2.31) BS01 209 4.1.2.25
    5.1.99.8    		 GO:0004150 ... P56740 15027862 MOAD: ic50=50uM
    PDBbind: -logKd/Ki=4.30, IC50=50uM
    2475 1rs4:A (2.7) BS01 45P 4.1.2.25
    5.1.99.8    		 GO:0004150 ... P56740 15027862 PDBbind: -logKd/Ki=7.17, IC50=0.068uM
    2476 1rsd:A (2.5) BS01 PSB 4.1.2.25
    5.1.99.8    		 GO:0004150 ... P56740 15027862 MOAD: ic50=0.3uM
    PDBbind: -logKd/Ki=6.52, IC50=0.30uM
    2477 1rsi:A (2.2) BS01 977 4.1.2.25
    5.1.99.8    		 GO:0004150 ... P56740 15027862 MOAD: ic50=38uM
    PDBbind: -logKd/Ki=4.42, IC50=38uM
    2478 1rt1:A (2.55) BS01 MKC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 8648598 PDBbind: -logKd/Ki=8.10, IC50=8nM
    2479 1rt2:A (2.55) BS01 TNK 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 8648598 PDBbind: -logKd/Ki=8.22, IC50=6nM
    2480 1rt9:A (2.3) BS01 IMH 2.4.2.1 GO:0000255 ... P00491 N/A PDBbind: -logKd/Ki=10.25, Ki=56pM
    2481 1rth:A (2.2) BS01 U05 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 7540934 MOAD: ic50=0.4uM
    PDBbind: -logKd/Ki=6.40, IC50=0.4uM
    2482 1rti:A (3.0) BS01 HEF 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 7540934 PDBbind: -logKd/Ki=4.77, IC50=17uM
    2483 1rtl:A (2.75) BS04 CPX 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... P26664 14627400 PDBbind: -logKd/Ki=5.59, IC50=2.6uM
    2484 1ru1:A (1.4) BS03 APC 2.7.6.3 GO:0000287 ... P26281 14769023 PDBbind: -logKd/Ki=4.74, Kd=18uM
    2485 1ru2:A (1.48) BS03 APC 2.7.6.3 GO:0000287 ... P26281 14769023 MOAD: Kd=0.32uM
    PDBbind: -logKd/Ki=6.49, Kd=0.32uM
    2486 1rv1:A (2.3) BS01 IMZ 2.3.2.27 GO:0005634 ... Q00987 14704432 MOAD: ic50=0.14uM
    PDBbind: -logKd/Ki=6.85, IC50=0.14uM
    BindingDB: IC50=140nM
    2487 1rv1:A (2.3) BS02 IMZ 2.3.2.27 GO:0005634 ... Q00987 14704432 MOAD: ic50=0.14uM
    PDBbind: -logKd/Ki=6.85, IC50=0.14uM
    BindingDB: IC50=140nM
    2488 1rv1:A (2.3) BS03 IMZ 2.3.2.27 GO:0005634 ... Q00987 14704432 MOAD: ic50=0.14uM
    PDBbind: -logKd/Ki=6.85, IC50=0.14uM
    BindingDB: IC50=140nM
    2489 1rv1:C (2.3) BS01 IMZ 2.3.2.27 GO:0005634 ... Q00987 14704432 MOAD: ic50=0.14uM
    PDBbind: -logKd/Ki=6.85, IC50=0.14uM
    BindingDB: IC50=140nM
    2490 1rw8:A (2.4) BS01 580 2.7.11.30 GO:0004672 ... P36897 15177479 MOAD: ic50=0.175uM
    PDBbind: -logKd/Ki=6.76, IC50=0.175uM
    BindingDB: IC50=1320nM
    2491 1rwq:A (2.2) BS01 5AP 3.4.14.5 GO:0001618 ... P27487 15006388 MOAD: ic50=0.0001uM
    PDBbind: -logKd/Ki=10.00, IC50=0.1nM
    BindingDB: IC50=0.1nM
    2492 1rww:A (2.8) BS01 OQB 3.4.22.36 GO:0004197 ... P29466 16274992 PDBbind: -logKd/Ki=8.30, Ki=5nM
    BindingDB: IC50=5nM, Ki=5nM
    2493 1rww:B (2.8) BS01 OQB 3.4.22.36 GO:0004197 ... P29466 16274992 PDBbind: -logKd/Ki=8.30, Ki=5nM
    BindingDB: IC50=5nM, Ki=5nM
    2494 1rwx:A (1.85) BS01 YBH 3.4.22.36 GO:0004197 ... P29466 16274992 PDBbind: -logKd/Ki=7.37, Ki=43nM
    2495 1rwx:B (1.85) BS01 YBH 3.4.22.36 GO:0004197 ... P29466 16274992 PDBbind: -logKd/Ki=7.37, Ki=43nM
    2496 1rxp:A (1.7) BS02 169 3.4.21.4 GO:0004175 ... P00760 15081015 PDBbind: -logKd/Ki=7.14, IC50=72nM
    2497 1ryf:A (1.75) BS01 GDP 3.6.5.2 GO:0003924 ... P63000 14625275 PDBbind: -logKd/Ki=8.80, Kd=1.6nM
    2498 1ryh:A (1.75) BS01 GNP 3.6.5.2 GO:0003924 ... P63000 14625275 PDBbind: -logKd/Ki=7.56, Kd=27.6nM
    2499 1s03:G (2.7) BS01 rna ? GO:0000028 ... P0A7W7 15146079 PDBbind: Kd=0.2uM
    2500 1s03:H (2.7) BS01 rna ? GO:0000028 ... P0A7W7 15146079 PDBbind: Kd=0.2uM
    2501 1s17:A (1.95) BS01 GNR 3.5.1.88 GO:0006412 ... Q9I7A8 15006385 MOAD: ic50<5nM
    PDBbind: -logKd/Ki=8.30, IC50<5nM
    2502 1s19:A (2.1) BS01 MC9 ? GO:0003677 ... P11473 15055995 PDBbind: -logKd/Ki=9.51, Kd=0.31nM
    BindingDB: Kd=0.31nM
    2503 1s26:A (3.0) BS01 APC 4.6.1.1 GO:0005576 ... P40136 15063758 PDBbind: -logKd/Ki=3.07, Ki=0.85mM
    2504 1s38:A (1.81) BS02 MAQ 2.4.2.29 GO:0002099 ... P28720 N/A MOAD: Ki=7uM
    PDBbind: -logKd/Ki=5.15, Ki=7.0uM
    2505 1s39:A (1.95) BS02 AQO 2.4.2.29 GO:0002099 ... P28720 N/A MOAD: Ki=20nM
    PDBbind: -logKd/Ki=7.70, Ki=20nM
    2506 1s40:A (-1.00) BS01 dna ? GO:0000723 ... P32797 15066429 PDBbind: Kd=0.3nM
    2507 1s4d:A (2.7) BS01 SAH 2.1.1.107 GO:0004851 ... P21631 15522295 PDBbind: -logKd/Ki=6.49, Ki=0.32uM
    2508 1s4d:B (2.7) BS01 SAH 2.1.1.107 GO:0004851 ... P21631 15522295 PDBbind: -logKd/Ki=6.49, Ki=0.32uM
    2509 1s50:A (1.65) BS01 GLU ? GO:0015276 ... P42260 15721240 MOAD: Ki=1.4uM
    PDBbind: -logKd/Ki=7.20, Ki=0.063uM
    2510 1s5z:A (2.0) BS01 SON 2.7.4.6 GO:0004550 ... P22887 16787337 PDBbind: -logKd/Ki=3.21, Kd=0.62mM
    2511 1s63:B (1.9) BS05 778 2.5.1.58 GO:0003824 ... P49356 15248757 MOAD: Ki=0.9nM
    PDBbind: -logKd/Ki=9.05, Ki=0.9nM
    BindingDB: IC50=2nM
    2512 1s64:B (2.55) BS02 778 2.5.1.59 GO:0003824 ... P53610 15248757 PDBbind: -logKd/Ki=8.40, Ki=4nM
    2513 1s89:A (2.22) BS01 PGA 4.2.3.3 GO:0005737 ... P0A731 15049687 MOAD: Ki=5.8uM
    PDBbind: -logKd/Ki=5.24, Ki=5.8uM
    2514 1s89:F (2.22) BS01 PGA 4.2.3.3 GO:0005737 ... P0A731 15049687 MOAD: Ki=5.8uM
    PDBbind: -logKd/Ki=5.24, Ki=5.8uM
    2515 1s9t:A (1.8) BS01 QUS ? GO:0015276 ... P42260 15721240 MOAD: Ki=253nM
    PDBbind: -logKd/Ki=6.82, IC50=0.15uM
    BindingDB: Ki=134nM
    2516 1sb1:H (1.9) BS03 165 3.4.21.5 GO:0004252 ... P00734 15051174 MOAD: Ki=128nM
    PDBbind: -logKd/Ki=6.89, Ki=0.128uM
    2517 1sbg:A (2.3) BS01 IM1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 7918383 MOAD: Ki=18nM
    PDBbind: -logKd/Ki=7.74, Ki=18nM
    2518 1sbg:B (2.3) BS01 IM1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 7918383 PDBbind: -logKd/Ki=7.74, Ki=18nM
    2519 1sbr:A (2.3) BS02 VIB ? GO:0030975 ... O34911 15451668 MOAD: Kd~10uM
    PDBbind: -logKd/Ki=5.00, Kd=10uM
    2520 1sbr:A (2.3) BS03 VIB ? GO:0030975 ... O34911 15451668 MOAD: Kd~10uM
    PDBbind: -logKd/Ki=5.00, Kd=10uM
    2521 1sbr:B (2.3) BS01 VIB ? GO:0030975 ... O34911 15451668 MOAD: Kd~10uM
    PDBbind: -logKd/Ki=5.00, Kd=10uM
    2522 1sbr:B (2.3) BS02 VIB ? GO:0030975 ... O34911 15451668 MOAD: Kd~10uM
    PDBbind: -logKd/Ki=5.00, Kd=10uM
    2523 1sc7:A (3.0) BS01 dna 5.6.2.1 GO:0003677 ... P11387 15801827 PDBbind: IC50=4.9uM
    2524 1sc7:A (3.0) BS02 dna 5.6.2.1 GO:0003677 ... P11387 15801827 PDBbind: IC50=4.9uM
    2525 1sc7:A (3.0) BS03 dna 5.6.2.1 GO:0003677 ... P11387 15801827 PDBbind: IC50=4.9uM
    2526 1sc8:U (2.4) BS01 2IN 3.4.21.73 GO:0004252 ... P00749 15150279 MOAD: Ki=0.036uM
    PDBbind: -logKd/Ki=7.44, Ki=0.036uM
    BindingDB: Ki=36nM
    2527 1sdt:A (1.3) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15066177 PDBbind: -logKd/Ki=9.27, Ki=540pM
    2528 1sdt:B (1.3) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15066177 MOAD: Ki=540pM
    PDBbind: -logKd/Ki=9.27, Ki=540pM
    2529 1sdu:A (1.25) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15066177 PDBbind: -logKd/Ki=10.07, Ki=86pM
    2530 1sdu:B (1.25) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15066177 MOAD: Ki=86pM
    PDBbind: -logKd/Ki=10.07, Ki=86pM
    2531 1sdv:A (1.4) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15066177 PDBbind: -logKd/Ki=8.74, Ki=1810pM
    2532 1sdv:B (1.4) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15066177 MOAD: Ki=1810pM
    PDBbind: -logKd/Ki=8.74, Ki=1810pM
    2533 1seu:A (3.0) BS01 dna 5.6.2.1 GO:0003677 ... P11387 15801827 PDBbind: IC50=0.03uM
    2534 1seu:A (3.0) BS02 dna 5.6.2.1 GO:0003677 ... P11387 15801827 PDBbind: IC50=0.03uM
    2535 1seu:A (3.0) BS03 dna 5.6.2.1 GO:0003677 ... P11387 15801827 PDBbind: IC50=0.03uM
    2536 1sgu:A (1.9) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15379553 PDBbind: -logKd/Ki=5.37, Ki=4235nM
    2537 1sgu:B (1.9) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15379553 MOAD: Ki=4235nM
    PDBbind: -logKd/Ki=5.37, Ki=4235nM
    2538 1sh9:A (2.5) BS01 RIT 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15379553 PDBbind: -logKd/Ki=6.03, Ki=932nM
    2539 1sh9:B (2.5) BS01 RIT 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15379553 MOAD: Ki=932nM
    PDBbind: -logKd/Ki=6.03, Ki=932nM
    2540 1si2:A (2.6) BS01 rna ? GO:0003723 ... Q9UL18 15152257 PDBbind: Kd=0.89nM
    2541 1si3:A (2.6) BS01 rna ? GO:0003723 ... Q9UL18 15152257 PDBbind: Kd=2.18nM
    2542 1siv:A (2.5) BS01 PSI 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P05896 8241159 PDBbind: -logKd/Ki=8.08, Ki=8.4nM
    2543 1siv:B (2.5) BS01 PSI 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P05896 8241159 MOAD: Ki=8.4nM
    PDBbind: -logKd/Ki=8.08, Ki=8.4nM
    2544 1sj0:A (1.9) BS01 E4D ? N/A P03372 15084115 MOAD: ic50=0.8nM
    PDBbind: -logKd/Ki=9.10, IC50=0.8nM
    BindingDB: IC50=0.8nM
    2545 1skj:A (2.0) BS01 UR2 2.7.10.2 N/A P00524 9371236 MOAD: ic50=7uM
    PDBbind: -logKd/Ki=5.15, IC50=7.0uM
    2546 1sl3:A (1.81) BS02 170 3.4.21.5 GO:0004252 ... P00734 15163182 MOAD: Ki=1.4pM
    PDBbind: -logKd/Ki=11.85, Ki=1.4pM
    BindingDB: Ki=0.001400nM
    2547 1sm2:A (2.3) BS01 STU 2.7.10.2 GO:0004672 ... Q08881 14766749 MOAD: Ki<10nM
    PDBbind: -logKd/Ki=8.00, Ki<10nM
    2548 1snk:A (2.4) BS01 MYE 3.4.22.38 GO:0006508 ... P43235 15177446 PDBbind: -logKd/Ki=9.60, IC50=0.25nM
    BindingDB: IC50=0.250000nM
    2549 1so2:A (2.4) BS03 666 3.1.4.17 GO:0004114 ... Q13370 15147193 MOAD: ic50=0.27nM
    PDBbind: -logKd/Ki=9.57, IC50=0.27nM
    2550 1sqa:A (2.0) BS01 UI1 3.4.21.73 GO:0004252 ... P00749 15149645 MOAD: Ki=0.00062uM
    PDBbind: -logKd/Ki=9.21, Ki=0.62nM
    BindingDB: IC50=620nM, Ki=0.620000nM
    2551 1sqb:C (2.69) BS03 AZO 1.10.2.2 GO:0005739 ... P00157 15312779 PDBbind: -logKd/Ki=7.95, IC50=11.2nM
    2552 1sqi:A (2.15) BS02 869 1.13.11.27 GO:0000139 ... P32755 15301540 MOAD: ic50<20nM
    PDBbind: -logKd/Ki=7.70, IC50<20nM
    2553 1sqn:A (1.451) BS01 NDR ? N/A P06401 15189034 MOAD: Kd=0.4nM
    PDBbind: -logKd/Ki=9.40, Kd=0.4nM
    BindingDB: Kd=0.4nM, Ki=1.9nM, IC50=3.2nM, EC50=2.2nM
    2554 1sqo:A (1.84) BS01 UI2 3.4.21.73 GO:0004252 ... P00749 15149645 MOAD: Ki=0.035uM
    PDBbind: -logKd/Ki=7.46, Ki=0.035uM
    BindingDB: Ki=32nM
    2555 1sqp:C (2.7) BS03 MYX ? GO:0005739 ... P00157 15312779 PDBbind: -logKd/Ki=8.20, IC50=6.3nM
    2556 1sqq:C (3.0) BS04 OST ? GO:0005739 ... P00157 15312779 PDBbind: -logKd/Ki=7.82, Kd=15nM
    2557 1sqt:A (1.9) BS01 UI3 3.4.21.73 GO:0004252 ... P00749 15149645 MOAD: Ki=0.63uM
    PDBbind: -logKd/Ki=6.20, Ki=0.63uM
    BindingDB: Ki=630nM
    2558 1sr7:A (1.46) BS01 MOF ? N/A P06401 15189034 MOAD: Kd=0.08nM
    PDBbind: -logKd/Ki=10.10, Kd=0.08nM
    BindingDB: Kd=0.08nM
    2559 1sre:A (1.78) BS01 HAB ? GO:0009374 ... P22629 N/A PDBbind: -logKd/Ki=3.85, Kd=0.14mM
    2560 1srg:A (1.8) BS01 MHB ? GO:0009374 ... P22629 N/A MOAD: Ka=200000M^-1
    PDBbind: -logKd/Ki=5.30, Kd=5uM
    2561 1sri:A (1.65) BS01 DMB ? GO:0009374 ... P22629 N/A MOAD: Ka=1200000M^-1
    PDBbind: -logKd/Ki=6.08, Kd=0.83uM
    2562 1sri:B (1.65) BS01 DMB ? GO:0009374 ... P22629 N/A MOAD: Ka=1200000M^-1
    PDBbind: -logKd/Ki=6.08, Kd=0.83uM
    2563 1ssp:E (1.9) BS01 dna 3.2.2.27 GO:0004844 ... P13051 9724657 PDBbind: Kd=48nM
    2564 1ssq:A (1.85) BS01 CYS 2.3.1.30 GO:0005737 ... P43886 15147185 MOAD: Ki=1uM
    PDBbind: -logKd/Ki=6.00, Ki=1uM
    2565 1stc:E (2.3) BS02 STU 2.7.11.11 GO:0001669 ... P00517 9438863 MOAD: Ki=8nM
    PDBbind: -logKd/Ki=8.10, Ki=8nM
    2566 1std:A (2.9) BS01 BFS 4.2.1.94 GO:0005575 ... P56221 7866745 PDBbind: -logKd/Ki=10.33, Ki=47pM
    BindingDB: Ki=47nM
    2567 1stp:A (2.6) BS01 BTN ? GO:0005576 ... P22629 2911722 PDBbind: -logKd/Ki=13.40, Kd=40fM
    BindingDB: Kd=1.000000nM
    2568 1sv3:A (1.35) BS01 ANN 3.1.1.4 GO:0004623 ... P59071 16596639 PDBbind: -logKd/Ki=4.35, Kd=45uM
    2569 1sve:A (2.49) BS02 I01 2.7.11.11 GO:0001669 ... P00517 14998327 MOAD: ic50=5nM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    BindingDB: IC50=5nM
    2570 1svg:A (2.02) BS02 I04 2.7.11.11 GO:0001669 ... P00517 14998327 MOAD: ic50=2nM
    PDBbind: -logKd/Ki=8.70, IC50=2nM
    BindingDB: IC50=2nM
    2571 1svh:A (2.3) BS02 I08 2.7.11.11 GO:0001669 ... P00517 14998327 MOAD: ic50=360nM
    PDBbind: -logKd/Ki=6.44, IC50=360nM
    BindingDB: IC50=360nM
    2572 1sw1:A (1.9) BS03 PBE ? GO:0022857 ... O29280 15308642 MOAD: Kd=50nM
    PDBbind: -logKd/Ki=7.30, Kd=50nM
    2573 1swg:A (1.8) BS01 BTN ? GO:0009374 ... P22629 9568892 MOAD: Kd=43.9nM
    PDBbind: -logKd/Ki=7.36, Kd=43.9nM
    BindingDB: Kd=1.000000nM
    2574 1swg:D (1.8) BS01 BTN ? GO:0009374 ... P22629 9568892 MOAD: Kd=43.9nM
    PDBbind: -logKd/Ki=7.36, Kd=43.9nM
    BindingDB: Kd=1.000000nM
    2575 1swi:C (2.6) BS01 BNZ ? GO:0003700 ... P03069 8646536 PDBbind: -logKd/Ki=3.10, Kd=800uM
    2576 1swk:A (2.0) BS01 BTN ? GO:0009374 ... P22629 9636711 MOAD: Ka=100000000000000M^-1
    PDBbind: -logKd/Ki=12.00, Kd~1pM
    BindingDB: Kd=1.000000nM
    2577 1swk:D (2.0) BS01 BTN ? GO:0009374 ... P22629 9636711 MOAD: Ka=100000000000000M^-1
    PDBbind: -logKd/Ki=12.00, Kd~1pM
    BindingDB: Kd=1.000000nM
    2578 1swn:A (2.2) BS01 BTN ? GO:0009374 ... P22629 9636711 MOAD: Ka=100000000000000M^-1
    PDBbind: -logKd/Ki=12.00, Kd~1pM
    BindingDB: Kd=1.000000nM
    2579 1swn:D (2.2) BS01 BTN ? GO:0009374 ... P22629 9636711 MOAD: Ka=100000000000000M^-1
    PDBbind: -logKd/Ki=12.00, Kd~1pM
    BindingDB: Kd=1.000000nM
    2580 1swp:A (2.0) BS01 BTN ? GO:0009374 ... P22629 9636711 MOAD: Ka=100000000M^-1
    PDBbind: -logKd/Ki=11.00, Kd~10pM
    BindingDB: Kd=1.000000nM
    2581 1swp:D (2.0) BS01 BTN ? GO:0009374 ... P22629 9636711 MOAD: Ka=100000000M^-1
    PDBbind: -logKd/Ki=11.00, Kd~10pM
    BindingDB: Kd=1.000000nM
    2582 1swr:A (1.9) BS01 BTN ? GO:0009374 ... P22629 9636711 MOAD: Kd=0.12uM
    PDBbind: -logKd/Ki=6.92, Kd=0.12uM
    BindingDB: Kd=1.000000nM
    2583 1swr:D (1.9) BS01 BTN ? GO:0009374 ... P22629 9636711 MOAD: Kd=0.12uM
    PDBbind: -logKd/Ki=6.92, Kd=0.12uM
    BindingDB: Kd=1.000000nM
    2584 1syh:A (1.8) BS01 CPW ? GO:0015276 ... P19491 15591246 MOAD: Ki=393nM
    PDBbind: -logKd/Ki=6.41, Ki=393nM
    BindingDB: Ki=223nM, EC50=13900nM
    2585 1syi:A (2.1) BS01 CPW ? GO:0015276 ... P19491 15591246 MOAD: Ki=3330nM
    PDBbind: -logKd/Ki=5.44, Ki=3590nM
    BindingDB: Ki=223nM, EC50=13900nM
    2586 1syo:A (2.2) BS01 M6P ? GO:0005537 ... P08169 15169779 MOAD: Kd~1nM
    PDBbind: -logKd/Ki=9.00, Kd~1nM
    2587 1syo:B (2.2) BS01 M6P ? GO:0005537 ... P08169 15169779 MOAD: Kd~1nM
    PDBbind: -logKd/Ki=9.00, Kd~1nM
    2588 1sz0:A (2.1) BS01 M6P ? GO:0005537 ... P08169 15169779 MOAD: Kd~1nM
    PDBbind: -logKd/Ki=9.00, Kd~1nM
    2589 1sz0:B (2.1) BS01 M6P ? GO:0005537 ... P08169 15169779 MOAD: Kd~1nM
    PDBbind: -logKd/Ki=9.00, Kd~1nM
    2590 1szd:A (1.5) BS03 APR 2.3.1.286 GO:0017136 ... P53686 15150415 MOAD: Kd=29.16uM
    PDBbind: -logKd/Ki=4.54, Kd=29.16uM
    2591 1szm:A (2.5) BS01 BI4 2.7.11.11 GO:0001669 ... P00517 14996846 MOAD: ic50=2.94uM
    PDBbind: -logKd/Ki=5.53, IC50=2.94uM
    2592 1t13:D (2.9) BS01 INI 2.5.1.78 GO:0000906 ... P61711 16165152 PDBbind: -logKd/Ki=7.38, Kd=0.042uM
    2593 1t13:D (2.9) BS02 INI 2.5.1.78 GO:0000906 ... P61711 16165152 PDBbind: -logKd/Ki=7.38, Kd=0.042uM
    2594 1t13:E (2.9) BS01 INI 2.5.1.78 GO:0000906 ... P61711 16165152 PDBbind: -logKd/Ki=7.38, Kd=0.042uM
    2595 1t13:E (2.9) BS02 INI 2.5.1.78 GO:0000906 ... P61711 16165152 PDBbind: -logKd/Ki=7.38, Kd=0.042uM
    2596 1t1r:B (2.3) BS02 IMB 1.1.1.267 GO:0008299 ... P45568 15339150 MOAD: ic50=4uM
    PDBbind: -logKd/Ki=5.40, IC50=4uM
    BindingDB: IC50=4000nM
    2597 1t1s:A (2.4) BS03 CBQ 1.1.1.267 GO:0008299 ... P45568 15339150 MOAD: ic50=7uM
    PDBbind: -logKd/Ki=5.15, IC50=7uM
    BindingDB: IC50=7000nM
    2598 1t2t:A (2.5) BS01 dna 3.1.-.- GO:0003677 ... P13299 15361856 PDBbind: Kd=5.3nM
    2599 1t2t:A (2.5) BS02 dna 3.1.-.- GO:0003677 ... P13299 15361856 PDBbind: Kd=5.3nM
    2600 1t31:A (1.9) BS02 OHH 3.4.21.39 GO:0002003 ... P23946 15741158 MOAD: Ki=2.3nM
    PDBbind: -logKd/Ki=8.64, Ki=2.3nM
    BindingDB: Ki=2.3nM, IC50=4.5nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218