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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 19354 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    201 1dqx:C (2.4) BS02 BMP 4.1.1.23 GO:0004590 ... P03962 10681417 MOAD: Ki=9pM
    BindingDB: Ki=0.0090nM
    202 1dqx:D (2.4) BS01 BMP 4.1.1.23 GO:0004590 ... P03962 10681417 MOAD: Ki=9pM
    BindingDB: Ki=0.0090nM
    203 1dqx:D (2.4) BS02 BMP 4.1.1.23 GO:0004590 ... P03962 10681417 MOAD: Ki=9pM
    BindingDB: Ki=0.0090nM
    204 1dra:A (1.9) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 1998681 BindingDB: IC50=8.8nM, EC50=1nM
    205 1dra:B (1.9) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 1998681 BindingDB: IC50=8.8nM, EC50=1nM
    206 1drb:A (1.96) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 1998681 BindingDB: IC50=8.8nM, EC50=1nM
    207 1drb:B (1.96) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 1998681 BindingDB: IC50=8.8nM, EC50=1nM
    208 1dre:A (2.6) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 9012674 BindingDB: IC50=8.8nM, EC50=1nM
    209 1dvj:A (1.5) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 10681441 MOAD: Ki=0.51mM
    BindingDB: Ki=12400nM
    210 1dvj:B (1.5) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 10681441 MOAD: Ki=0.51mM
    BindingDB: Ki=12400nM
    211 1dvj:C (1.5) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 10681441 MOAD: Ki=0.51mM
    BindingDB: Ki=12400nM
    212 1dvj:D (1.5) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 10681441 MOAD: Ki=0.51mM
    BindingDB: Ki=12400nM
    213 1dvs:A (2.0) BS01 STL ? GO:0005179 ... P02766 10742177 BindingDB: Kd=470nM
    214 1dvx:A (2.0) BS01 DIF ? GO:0005179 ... P02766 10742177 BindingDB: Kd=1000nM, IC50=140000nM
    215 1dwd:H (3.0) BS03 MID 3.4.21.5 GO:0004252 ... P00734 1939071 PDBbind: -logKd/Ki=8.18, Ki=6.6nM
    BindingDB: Ki=6nM, IC50=690nM, EC50=750nM
    216 1dx6:A (2.3) BS01 GNT 3.1.1.7 GO:0001507 ... P04058 10606746 MOAD: ic50=652nM
    PDBbind: -logKd/Ki=6.19, IC50=652nM
    BindingDB: IC50=1069nM, Ki=1.9e+2nM
    217 1dyr:A (1.86) BS02 TOP 1.5.1.3 GO:0004146 ... P16184 7866743 MOAD: ic50=20uM
    BindingDB: IC50=12000nM, Ki=280000nM
    218 1e1v:A (1.95) BS01 CMG 2.7.11.22 GO:0000082 ... P24941 10956187 MOAD: Ki=12uM
    PDBbind: -logKd/Ki=4.92, Ki=12uM
    BindingDB: IC50=17000nM
    219 1e1x:A (1.85) BS01 NW1 2.7.11.22 GO:0000082 ... P24941 10956187 MOAD: Ki=1.3uM
    PDBbind: -logKd/Ki=5.89, Ki=1.3uM
    BindingDB: IC50=2200nM, Ki=1300nM
    220 1e1y:A (2.23) BS01 CPB 2.4.1.1 GO:0000166 ... P00489 10924512 MOAD: ic50=2.5uM
    PDBbind: -logKd/Ki=5.60, IC50=2.5uM
    BindingDB: IC50=1200nM
    221 1e3g:A (2.4) BS01 R18 ? N/A P10275 10840043 PDBbind: -logKd/Ki=9.00, Kd=0.99nM
    BindingDB: Kd=0.99nM, IC50=0.302000nM, EC50=0.013000nM, Ki=0.400000nM
    222 1e3k:A (2.8) BS01 R18 ? N/A P06401 10840043 BindingDB: Ki=0.490000nM
    223 1e3k:B (2.8) BS01 R18 ? N/A P06401 10840043 BindingDB: Ki=0.490000nM
    224 1e7b:A (2.38) BS01 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    225 1e7b:A (2.38) BS02 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    226 1e7b:B (2.38) BS01 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    227 1e7b:B (2.38) BS02 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    228 1e7b:B (2.38) BS03 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    229 1e7c:A (2.4) BS01 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    230 1e7c:A (2.4) BS02 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    231 1e7c:A (2.4) BS03 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    232 1e7c:A (2.4) BS04 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    233 1e7c:A (2.4) BS05 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    234 1e7w:A (1.75) BS02 MTX 1.5.1.33 GO:0004155 ... Q01782 11373620 BindingDB: Ki=180nM
    235 1e7w:B (1.75) BS02 MTX 1.5.1.33 GO:0004155 ... Q01782 11373620 BindingDB: Ki=180nM
    236 1e9h:A (2.5) BS01 INR 2.7.11.22 GO:0000082 ... P24941 11377199 MOAD: ic50=35nM
    PDBbind: -logKd/Ki=7.46, IC50=35nM
    BindingDB: IC50=3e+2nM
    237 1e9h:C (2.5) BS01 INR 2.7.11.22 GO:0000082 ... P24941 11377199 MOAD: ic50=35nM
    BindingDB: IC50=3e+2nM
    238 1eb2:A (2.0) BS02 BPO 3.4.21.4 GO:0004175 ... P00760 11881991 MOAD: Ki=16nM
    PDBbind: -logKd/Ki=6.01, Ki=980nM
    BindingDB: Ki=980nM
    239 1ecv:A (1.95) BS01 878 3.1.3.48 GO:0004725 ... P18031 10702277 MOAD: Ki=14uM
    PDBbind: -logKd/Ki=4.85, Ki=14uM
    BindingDB: Ki=71449632607551nM
    240 1ed5:A (1.8) BS02 NRG 1.14.13.39 GO:0004517 ... P29473 11695891 BindingDB: IC50=1200nM, Ki=750nM
    241 1ed5:B (1.8) BS03 NRG 1.14.13.39 GO:0004517 ... P29473 11695891 BindingDB: IC50=1200nM, Ki=750nM
    242 1ef3:A (2.8) BS02 FID 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 10882376 BindingDB: IC50=35nM, Kd=16nM
    243 1ef3:B (2.8) BS02 FID 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 10882376 BindingDB: IC50=35nM, Kd=16nM
    244 1ek2:A (3.0) BS01 CDU 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34914 10747889 PDBbind: -logKd/Ki=8.20, Ki=6.3nM
    BindingDB: IC50=50nM
    245 1ek2:B (3.0) BS01 CDU 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34914 10747889 BindingDB: IC50=50nM
    246 1el3:A (1.7) BS02 I84 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 10771421 BindingDB: IC50=108nM
    247 1em6:A (2.2) BS02 CP4 2.4.1.1 GO:0000166 ... P06737 10980448 MOAD: ic50=6nM
    PDBbind: -logKd/Ki=8.22, IC50=6nM
    BindingDB: IC50=6.0nM
    248 1em6:B (2.2) BS01 CP4 2.4.1.1 GO:0000166 ... P06737 10980448 PDBbind: -logKd/Ki=8.22, IC50=6nM
    BindingDB: IC50=6.0nM
    249 1eou:A (2.1) BS02 SMS 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11802772 MOAD: ic50=36nM
    PDBbind: -logKd/Ki=7.44, IC50=36nM
    BindingDB: IC50=36nM, Kd=10nM, Ki=12nM
    250 1ep4:A (2.5) BS01 S11 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 10799511 BindingDB: IC50=47nM
    251 1eqg:A (2.61) BS02 IBP 1.14.99.1 GO:0004601 ... P05979 11318639 BindingDB: IC50=2900nM, Ki=9000nM
    252 1eqg:B (2.61) BS02 IBP 1.14.99.1 GO:0004601 ... P05979 11318639 BindingDB: IC50=2900nM, Ki=9000nM
    253 1eqh:A (2.7) BS02 FLP 1.14.99.1 GO:0004601 ... P05979 11318639 BindingDB: IC50=150nM, Ki=1000nM
    254 1eqh:B (2.7) BS02 FLP 1.14.99.1 GO:0004601 ... P05979 11318639 BindingDB: IC50=150nM, Ki=1000nM
    255 1ere:A (3.1) BS01 EST ? N/A P03372 9338790 BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    256 1ere:B (3.1) BS01 EST ? N/A P03372 9338790 BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    257 1ere:C (3.1) BS01 EST ? N/A P03372 9338790 BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    258 1ere:D (3.1) BS01 EST ? N/A P03372 9338790 BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    259 1ere:E (3.1) BS01 EST ? N/A P03372 9338790 BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    260 1ere:F (3.1) BS01 EST ? N/A P03372 9338790 BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    261 1erm:A (1.7) BS01 BJI 3.5.2.6 GO:0005515 ... P62593 10820001 BindingDB: Ki=110nM
    262 1err:A (2.6) BS01 RAL ? N/A P03372 9338790 PDBbind: -logKd/Ki=8.11, IC50=7.7nM
    BindingDB: IC50=1.8nM, EC50=2.4nM, Ki=0.37nM
    263 1err:B (2.6) BS01 RAL ? N/A P03372 9338790 BindingDB: IC50=1.8nM, EC50=2.4nM, Ki=0.37nM
    264 1eta:1 (1.7) BS01 T44 ? GO:0005179 ... P02766 8428915 BindingDB: IC50=10500nM
    265 1eta:2 (1.7) BS01 T44 ? GO:0005179 ... P02766 8428915 BindingDB: IC50=10500nM
    266 1etb:1 (1.7) BS01 T44 ? GO:0005179 ... P02766 8428915 BindingDB: IC50=10500nM
    267 1etb:2 (1.7) BS01 T44 ? GO:0005179 ... P02766 8428915 BindingDB: IC50=10500nM
    268 1ets:H (2.3) BS01 MID 3.4.21.5 GO:0004252 ... P00735 1518046 MOAD: Ki=6nM
    PDBbind: -logKd/Ki=8.22, Ki=6nM
    BindingDB: Ki=6nM
    269 1eve:A (2.5) BS01 E20 3.1.1.7 GO:0001507 ... P04058 10368299 MOAD: ic50=5.7nM
    PDBbind: -logKd/Ki=8.24, IC50=5.7nM
    BindingDB: IC50=23nM, Ki=3.3nM
    270 1exv:A (2.4) BS03 700 2.4.1.1 GO:0000166 ... P06737 10980448 MOAD: ic50=45nM
    PDBbind: -logKd/Ki=7.35, IC50=45nM
    BindingDB: IC50=45nM
    271 1exv:A (2.4) BS04 700 2.4.1.1 GO:0000166 ... P06737 10980448 MOAD: ic50=45nM
    PDBbind: -logKd/Ki=7.35, IC50=45nM
    BindingDB: IC50=45nM
    272 1exv:B (2.4) BS01 700 2.4.1.1 GO:0000166 ... P06737 10980448 MOAD: ic50=45nM
    PDBbind: -logKd/Ki=7.35, IC50=45nM
    BindingDB: IC50=45nM
    273 1exv:B (2.4) BS04 700 2.4.1.1 GO:0000166 ... P06737 10980448 MOAD: ic50=45nM
    PDBbind: -logKd/Ki=7.35, IC50=45nM
    BindingDB: IC50=45nM
    274 1eyj:A (2.28) BS04 AMP 3.1.3.11 GO:0005737 ... P00636 10913263 BindingDB: IC50=1300nM
    275 1eyj:B (2.28) BS04 AMP 3.1.3.11 GO:0005737 ... P00636 10913263 BindingDB: IC50=1300nM
    276 1eyk:A (2.23) BS04 AMP 3.1.3.11 GO:0005737 ... P00636 10913263 BindingDB: IC50=1300nM
    277 1eyk:B (2.23) BS04 AMP 3.1.3.11 GO:0005737 ... P00636 10913263 BindingDB: IC50=1300nM
    278 1ezq:A (2.2) BS02 RPR 3.4.21.6 GO:0004252 ... P00742 10966741 MOAD: Ki=0.9nM
    PDBbind: -logKd/Ki=9.05, Ki=0.9nM
    BindingDB: Ki=0.9nM
    279 1f0q:A (2.63) BS01 EMO 2.7.11.1 GO:0004672 ... P28523 10882732 PDBbind: -logKd/Ki=6.00, IC50=1uM
    BindingDB: Ki=1850nM
    280 1f0r:A (2.1) BS02 815 3.4.21.6 GO:0004252 ... P00742 10966741 MOAD: Ki=22nM
    PDBbind: -logKd/Ki=7.66, Ki=22nM
    BindingDB: Ki=22nM
    281 1f0s:A (2.1) BS02 PR2 3.4.21.6 GO:0004252 ... P00742 10966741 MOAD: Ki=18nM
    PDBbind: -logKd/Ki=7.74, Ki=18nM
    BindingDB: Ki=18nM
    282 1f0t:A (1.8) BS02 PR1 3.4.21.4 GO:0004252 ... P00760 10966741 MOAD: Ki=1000nM
    PDBbind: -logKd/Ki=6.00, Ki=1000nM
    BindingDB: Ki=1000nM
    283 1f0u:A (1.9) BS02 RPR 3.4.21.4 GO:0004252 ... P00760 10966741 MOAD: Ki=69nM
    PDBbind: -logKd/Ki=7.16, Ki=69nM
    BindingDB: Ki=69nM
    284 1f40:A (-1.00) BS01 GPI 5.2.1.8 GO:0000413 ... P62942 10951192 PDBbind: -logKd/Ki=6.00, Kd=1uM
    BindingDB: Ki=7.5nM, IC50=1240nM
    285 1f57:A (1.75) BS02 DCY 3.4.17.1 GO:0004181 ... P00730 10955996 MOAD: Ki=2.3uM
    PDBbind: -logKd/Ki=5.64, Ki=2.3uM
    BindingDB: Ki=2300nM
    286 1f5f:A (1.7) BS04 DHT ? N/A P04278 10859323 BindingDB: IC50=3.8nM, Kd=0.182000nM
    287 1f5l:A (2.1) BS01 AMR 3.4.21.73 GO:0004252 ... P00749 10926521 MOAD: Ki=5.3uM
    PDBbind: -logKd/Ki=5.28, Ki=5.3uM
    BindingDB: IC50=7000nM, Ki=7000nM
    288 1f86:A (1.1) BS01 T44 ? GO:0005179 ... P02766 11243784 BindingDB: IC50=10500nM
    289 1f86:B (1.1) BS01 T44 ? GO:0005179 ... P02766 11243784 BindingDB: IC50=10500nM
    290 1f8b:A (1.8) BS02 DAN 3.2.1.18 GO:0004308 ... P03472 11274459 MOAD: Ki=4uM
    PDBbind: -logKd/Ki=5.40, Ki=4.0uM
    BindingDB: IC50=13000nM
    291 1f92:A (2.6) BS01 UKP 3.4.21.73 GO:0004252 ... P00749 10926521 PDBbind: -logKd/Ki=6.19, Ki=0.64uM
    BindingDB: Ki=640nM
    292 1fap:A (2.7) BS01 RAP 5.2.1.8 GO:0000413 ... P62942 8662507 BindingDB: IC50=0.600000nM, EC50=30nM, Ki=0.20nM
    293 1fap:B (2.7) BS01 RAP 2.7.11.1 GO:0044877 ... P42345 8662507 BindingDB: IC50=>10000nM, Kd=0.600000nM
    294 1fax:A (3.0) BS02 DX9 3.4.21.6 GO:0004252 ... P00742 8939944 PDBbind: -logKd/Ki=7.39, Ki=41nM
    BindingDB: Ki=41nM, IC50=70nM
    295 1fbp:A (2.5) BS03 AMP 3.1.3.11 GO:0005737 ... P00636 2164670 BindingDB: IC50=1300nM
    296 1fbp:B (2.5) BS03 AMP 3.1.3.11 GO:0005737 ... P00636 2164670 BindingDB: IC50=1300nM
    297 1fby:A (2.25) BS01 9CR ? GO:0003677 ... P19793 10835357 MOAD: Kd=1.5nM
    BindingDB: EC50=100nM, Ki=583nM, IC50=32nM, Kd=240nM
    298 1fby:B (2.25) BS01 9CR ? GO:0003677 ... P19793 10835357 MOAD: Kd=1.5nM
    BindingDB: EC50=100nM, Ki=583nM, IC50=32nM, Kd=240nM
    299 1fcx:A (1.47) BS01 184 ? GO:0003677 ... P13631 10964567 MOAD: Kd=64nM
    PDBbind: -logKd/Ki=7.19, Kd=64nM
    BindingDB: Kd=64nM
    300 1fcy:A (1.3) BS01 564 ? GO:0003677 ... P13631 10964567 MOAD: Kd=3nM
    PDBbind: -logKd/Ki=8.52, Kd=3nM
    BindingDB: Kd=3nM
    301 1ffy:A (2.2) BS03 MRC 6.1.1.5 GO:0000049 ... P41972 10446055 BindingDB: IC50=20000nM
    302 1fgi:A (2.5) BS01 SU1 2.7.10.1 GO:0004672 ... P11362 9139660 PDBbind: -logKd/Ki=5.00, IC50=10uM
    BindingDB: IC50=30nM
    303 1fgi:B (2.5) BS01 SU1 2.7.10.1 GO:0004672 ... P11362 9139660 BindingDB: IC50=30nM
    304 1fj4:A (2.35) BS01 TLM 2.3.1.41 GO:0004315 ... P0A953 11050088 MOAD: Kd=26uM
    PDBbind: -logKd/Ki=4.59, Kd=26uM
    BindingDB: IC50=12000nM
    305 1fj4:B (2.35) BS01 TLM 2.3.1.41 GO:0004315 ... P0A953 11050088 MOAD: Kd=26uM
    PDBbind: -logKd/Ki=4.59, Kd=26uM
    BindingDB: IC50=12000nM
    306 1fj4:C (2.35) BS01 TLM 2.3.1.41 GO:0004315 ... P0A953 11050088 MOAD: Kd=26uM
    BindingDB: IC50=12000nM
    307 1fj4:D (2.35) BS01 TLM 2.3.1.41 GO:0004315 ... P0A953 11050088 MOAD: Kd=26uM
    BindingDB: IC50=12000nM
    308 1fj9:A (2.5) BS05 AMP 3.1.3.11 GO:0005737 ... P00636 10998248 BindingDB: IC50=1300nM
    309 1fj9:B (2.5) BS05 AMP 3.1.3.11 GO:0005737 ... P00636 10998248 BindingDB: IC50=1300nM
    310 1fjs:A (1.92) BS02 Z34 3.4.21.6 GO:0004252 ... P00742 11027132 MOAD: Ki=0.11nM
    PDBbind: -logKd/Ki=9.96, Ki=0.11nM
    BindingDB: Ki=0.11nM
    311 1fk9:A (2.5) BS01 EFZ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 11080630 BindingDB: IC50=25nM, Ki=30nM
    312 1fkb:A (1.7) BS01 RAP 5.2.1.8 GO:0000413 ... P62942 N/A MOAD: Kd=0.2nM
    PDBbind: -logKd/Ki=9.70, Kd=0.2nM
    BindingDB: IC50=0.600000nM, EC50=30nM, Ki=0.20nM
    313 1fkf:A (1.7) BS01 FK5 5.2.1.8 GO:0000413 ... P62942 1709302 MOAD: Kd=0.4nM
    PDBbind: -logKd/Ki=9.40, Kd=0.4nM
    BindingDB: Kd=0.200000nM, EC50=0.900000nM, Ki=0.40nM, IC50=2.3nM
    314 1fkg:A (2.0) BS01 SB3 5.2.1.8 GO:0000413 ... P62942 N/A MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    BindingDB: Ki=17nM
    315 1fkj:A (1.7) BS01 FK5 5.2.1.8 GO:0000413 ... P62942 15299838 BindingDB: Kd=0.200000nM, EC50=0.900000nM, Ki=0.40nM, IC50=2.3nM
    316 1fko:A (2.9) BS01 EFZ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 11080630 BindingDB: IC50=25nM, Ki=30nM
    317 1fls:A (-1.00) BS04 WAY 3.4.24.- GO:0004222 ... P45452 10986126 PDBbind: -logKd/Ki=7.48, IC50=33nM
    BindingDB: IC50=8nM
    318 1fm1:A (-1.00) BS04 WAY 3.4.24.- GO:0004222 ... P45452 10986126 BindingDB: IC50=8nM
    319 1fm6:A (2.1) BS02 9CR ? GO:0003677 ... P19793 10882139 BindingDB: EC50=100nM, Ki=583nM, IC50=32nM, Kd=240nM
    320 1fm6:D (2.1) BS02 BRL ? GO:0003677 ... P37231 10882139 BindingDB: EC50=40nM, IC50=1.000000nM, Ki=8nM, Kd=0.145000nM
    321 1fm6:U (2.1) BS02 9CR ? GO:0003677 ... P19793 10882139 BindingDB: EC50=100nM, Ki=583nM, IC50=32nM, Kd=240nM
    322 1fm6:X (2.1) BS02 BRL ? GO:0003677 ... P37231 10882139 BindingDB: EC50=40nM, IC50=1.000000nM, Ki=8nM, Kd=0.145000nM
    323 1fm9:A (2.1) BS02 9CR ? GO:0003677 ... P19793 10882139 BindingDB: EC50=100nM, Ki=583nM, IC50=32nM, Kd=240nM
    324 1fm9:D (2.1) BS02 570 ? GO:0003677 ... P37231 10882139 MOAD: Ki=1nM
    PDBbind: -logKd/Ki=9.00, Ki=1nM
    BindingDB: Ki=1.1nM, EC50=0.338844nM, IC50=25nM
    325 1foj:A (2.1) BS03 7NI 1.14.13.39 GO:0004517 ... P29473 11695891 BindingDB: IC50=35000nM
    326 1foj:B (2.1) BS03 7NI 1.14.13.39 GO:0004517 ... P29473 11695891 BindingDB: IC50=35000nM
    327 1fpd:A (2.1) BS04 AMP 3.1.3.11 GO:0005737 ... P00636 7703244 BindingDB: IC50=1300nM
    328 1fpd:B (2.1) BS04 AMP 3.1.3.11 GO:0005737 ... P00636 7703244 BindingDB: IC50=1300nM
    329 1fpe:A (2.2) BS04 AMP 3.1.3.11 GO:0005737 ... P00636 7703244 BindingDB: IC50=1300nM
    330 1fpe:B (2.2) BS04 AMP 3.1.3.11 GO:0005737 ... P00636 7703244 BindingDB: IC50=1300nM
    331 1fpf:A (2.1) BS04 AMP 3.1.3.11 GO:0005737 ... P00636 7703244 BindingDB: IC50=1300nM
    332 1fpf:B (2.1) BS04 AMP 3.1.3.11 GO:0005737 ... P00636 7703244 BindingDB: IC50=1300nM
    333 1fpg:A (2.3) BS04 AMP 3.1.3.11 GO:0005737 ... P00636 7703244 BindingDB: IC50=1300nM
    334 1fpg:B (2.3) BS04 AMP 3.1.3.11 GO:0005737 ... P00636 7703244 BindingDB: IC50=1300nM
    335 1fpi:A (2.3) BS04 AMP 3.1.3.11 GO:0005737 ... P00636 7568043 PDBbind: -logKd/Ki=5.89, IC50=1.3uM
    BindingDB: IC50=1300nM
    336 1fpi:B (2.3) BS04 AMP 3.1.3.11 GO:0005737 ... P00636 7568043 BindingDB: IC50=1300nM
    337 1fpj:A (2.2) BS02 AMP 3.1.3.11 GO:0005737 ... P00636 7568043 BindingDB: IC50=1300nM
    338 1fpj:B (2.2) BS02 AMP 3.1.3.11 GO:0005737 ... P00636 7568043 BindingDB: IC50=1300nM
    339 1fpl:A (2.3) BS04 AMP 3.1.3.11 GO:0005737 ... P00636 7568043 BindingDB: IC50=1300nM
    340 1fpl:B (2.3) BS04 AMP 3.1.3.11 GO:0005737 ... P00636 7568043 BindingDB: IC50=1300nM
    341 1frp:A (2.0) BS03 AMP 3.1.3.11 GO:0005737 ... P00636 7809062 BindingDB: IC50=1300nM
    342 1frp:B (2.0) BS03 AMP 3.1.3.11 GO:0005737 ... P00636 7809062 BindingDB: IC50=1300nM
    343 1fs4:A (2.38) BS01 CRA 2.4.1.1 GO:0000166 ... P00489 16222658 BindingDB: Ki=16000nM
    344 1fsa:A (2.3) BS03 AMP 3.1.3.11 GO:0005737 ... P00636 8931152 BindingDB: IC50=1300nM
    345 1fsa:B (2.3) BS03 AMP 3.1.3.11 GO:0005737 ... P00636 8931152 BindingDB: IC50=1300nM
    346 1fsw:A (1.9) BS01 CTB 3.5.2.6 GO:0008800 ... P00811 11182316 PDBbind: -logKd/Ki=6.49, Ki=0.32uM
    BindingDB: Ki=3.2e+2nM
    347 1fsw:B (1.9) BS01 CTB 3.5.2.6 GO:0008800 ... P00811 11182316 BindingDB: Ki=3.2e+2nM
    348 1fsy:A (1.75) BS01 105 3.5.2.6 GO:0008800 ... P00811 11182316 PDBbind: -logKd/Ki=6.82, Ki=0.15uM
    BindingDB: Ki=150nM
    349 1fsy:B (1.75) BS01 105 3.5.2.6 GO:0008800 ... P00811 11182316 BindingDB: Ki=150nM
    350 1fta:A (2.3) BS01 AMP 3.1.3.11 GO:0000122 ... P09467 7961695 PDBbind: -logKd/Ki=6.36, IC50=0.44uM
    BindingDB: IC50=3200nM
    351 1fta:B (2.3) BS01 AMP 3.1.3.11 GO:0000122 ... P09467 7961695 BindingDB: IC50=3200nM
    352 1fta:C (2.3) BS01 AMP 3.1.3.11 GO:0000122 ... P09467 7961695 PDBbind: -logKd/Ki=6.36, IC50=0.44uM
    BindingDB: IC50=3200nM
    353 1fta:D (2.3) BS01 AMP 3.1.3.11 GO:0000122 ... P09467 7961695 BindingDB: IC50=3200nM
    354 1ftk:A (1.6) BS01 KAI ? GO:0015276 ... P19491 11086992 MOAD: ic50=14.5uM
    PDBbind: -logKd/Ki=4.84, IC50=14.5uM
    BindingDB: EC50=380000nM, Ki=3690nM
    355 1ftm:A (1.7) BS02 AMQ ? GO:0015276 ... P19491 11086992 MOAD: Kd=24.8nM
    PDBbind: -logKd/Ki=7.61, Kd=24.8nM
    BindingDB: Ki=17nM
    356 1ftm:B (1.7) BS03 AMQ ? GO:0015276 ... P19491 11086992 MOAD: Kd=24.8nM
    BindingDB: Ki=17nM
    357 1ftm:C (1.7) BS02 AMQ ? GO:0015276 ... P19491 11086992 MOAD: Kd=24.8nM
    BindingDB: Ki=17nM
    358 1fu7:A (2.36) BS01 CR1 2.4.1.1 GO:0000166 ... P00489 16222658 BindingDB: Ki=210000nM
    359 1fu8:A (2.35) BS01 CR6 2.4.1.1 GO:0000166 ... P00489 16222658 BindingDB: Ki=310000nM
    360 1fvt:A (2.2) BS01 106 2.7.11.22 GO:0000082 ... P24941 11141566 PDBbind: -logKd/Ki=7.22, IC50=60nM
    BindingDB: IC50=60nM
    361 1fw0:A (1.9) BS01 KAI ? GO:0015276 ... P19491 11086992 PDBbind: -logKd/Ki=5.43, Ki=3690nM
    BindingDB: EC50=380000nM, Ki=3690nM
    362 1g05:B (2.45) BS06 BBH 3.4.24.17 GO:0004222 ... P08254 11327577 MOAD: ic50=3.1nM
    PDBbind: -logKd/Ki=8.51, IC50=3.1nM
    BindingDB: IC50=3.1nM
    363 1g2l:A (1.9) BS02 T87 3.4.21.6 GO:0004252 ... P00742 11342132 MOAD: Ki=57nM
    PDBbind: -logKd/Ki=7.24, Ki=57nM
    BindingDB: Ki=57nM
    364 1g2m:A (3.02) BS02 R11 3.4.21.6 GO:0004252 ... P00742 11342132 PDBbind: -logKd/Ki=7.40, Ki=40nM
    BindingDB: Ki=40nM
    365 1g30:B (2.0) BS03 T87 3.4.21.5 GO:0004252 ... P00734 11342132 MOAD: Ki=140nM
    PDBbind: -logKd/Ki=6.85, Ki=140nM
    BindingDB: Ki=140nM
    366 1g32:B (1.9) BS03 R11 3.4.21.5 GO:0004252 ... P00734 11342132 MOAD: Ki=780nM
    PDBbind: -logKd/Ki=6.11, Ki=780nM
    BindingDB: Ki=780nM
    367 1g36:A (1.9) BS02 R11 3.4.21.4 GO:0004175 ... P00760 11342132 MOAD: Ki=67nM
    PDBbind: -logKd/Ki=7.17, Ki=67nM
    BindingDB: Ki=67nM
    368 1g49:B (1.9) BS06 111 3.4.24.17 GO:0004222 ... P08254 11150165 MOAD: ic50=16nM
    PDBbind: -logKd/Ki=7.80, IC50=16nM
    BindingDB: IC50=16nM
    369 1g4k:A (2.0) BS06 HQQ 3.4.24.17 GO:0004222 ... P08254 11316871 PDBbind: -logKd/Ki=5.70, IC50=2.0uM
    BindingDB: IC50=2000nM
    370 1g4k:B (2.0) BS06 HQQ 3.4.24.17 GO:0004222 ... P08254 11316871 BindingDB: IC50=2000nM
    371 1g4k:C (2.0) BS06 HQQ 3.4.24.17 GO:0004222 ... P08254 11316871 BindingDB: IC50=2000nM
    372 1g4o:A (1.96) BS02 BSB 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A MOAD: Kd=5.6nM
    PDBbind: -logKd/Ki=8.25, Kd=5.6nM
    BindingDB: Kd=1.1nM
    373 1g50:A (2.9) BS01 EST ? N/A P03372 11437591 PDBbind: -logKd/Ki=6.28, Kd=0.53uM
    BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    374 1g50:B (2.9) BS01 EST ? N/A P03372 11437591 BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    375 1g50:C (2.9) BS01 EST ? N/A P03372 11437591 BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    376 1g5s:A (2.61) BS01 I17 2.7.11.22 GO:0000082 ... P24941 11170642 PDBbind: -logKd/Ki=7.32, IC50=48nM
    BindingDB: IC50=48nM
    377 1g6s:A (1.5) BS01 S3P 2.5.1.19 GO:0003824 ... P0A6D3 11171958 PDBbind: -logKd/Ki=5.15, Kd=7uM
    BindingDB: Kd=7000nM
    378 1g6t:A (1.6) BS02 S3P 2.5.1.19 GO:0003824 ... P0A6D3 11171958 BindingDB: Kd=7000nM
    379 1ga9:A (2.1) BS01 ETP 3.5.2.6 GO:0008800 ... P00811 11410378 PDBbind: -logKd/Ki=7.08, Ki=83nM
    BindingDB: Ki=80nM
    380 1ga9:B (2.1) BS01 ETP 3.5.2.6 GO:0008800 ... P00811 11410378 BindingDB: Ki=80nM
    381 1gbn:B (2.3) BS01 GBC 2.6.1.13 GO:0004587 ... P04181 9309222 BindingDB: Ki=2.1nM
    382 1gbn:C (2.3) BS01 GBC 2.6.1.13 GO:0004587 ... P04181 9309222 BindingDB: Ki=2.1nM
    383 1gcz:A (1.9) BS01 YZ9 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 11170644 MOAD: Ki=7.4uM
    PDBbind: -logKd/Ki=5.13, Ki=7.4uM
    BindingDB: Ki=7400nM
    384 1gcz:A (1.9) BS02 YZ9 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 11170644 MOAD: Ki=7.4uM
    PDBbind: -logKd/Ki=5.13, Ki=7.4uM
    BindingDB: Ki=7400nM
    385 1gcz:B (1.9) BS01 YZ9 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 11170644 MOAD: Ki=7.4uM
    BindingDB: Ki=7400nM
    386 1gcz:B (1.9) BS02 YZ9 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 11170644 MOAD: Ki=7.4uM
    BindingDB: Ki=7400nM
    387 1gcz:C (1.9) BS01 YZ9 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 11170644 MOAD: Ki=7.4uM
    PDBbind: -logKd/Ki=5.13, Ki=7.4uM
    BindingDB: Ki=7400nM
    388 1gcz:C (1.9) BS02 YZ9 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 11170644 MOAD: Ki=7.4uM
    PDBbind: -logKd/Ki=5.13, Ki=7.4uM
    BindingDB: Ki=7400nM
    389 1gfw:A (2.8) BS01 MSI 3.4.22.56 GO:0004197 ... P42574 10821855 PDBbind: -logKd/Ki=7.82, Ki=15nM
    BindingDB: Ki=15nM, IC50=114nM, EC50=7670nM
    390 1gfw:B (2.8) BS01 MSI 3.4.22.56 GO:0004197 ... P42574 10821855 PDBbind: -logKd/Ki=7.82, Ki=15nM
    BindingDB: Ki=15nM, IC50=114nM, EC50=7670nM
    391 1gfy:A (2.13) BS01 COL 3.1.3.48 GO:0004725 ... P18031 10748206 PDBbind: -logKd/Ki=5.08, Ki=8.32uM
    BindingDB: Ki=8317.64nM
    392 1gfz:A (2.3) BS03 CFF 2.4.1.1 GO:0000166 ... P00489 10924512 MOAD: Ki~0.15mM
    PDBbind: -logKd/Ki=4.00, Ki=0.1mM
    BindingDB: IC50=114000nM
    393 1gg8:A (2.31) BS01 GLG 2.4.1.1 GO:0000166 ... P00489 8180201 MOAD: Ki=1mM
    BindingDB: Ki=370000nM
    394 1ggn:A (2.36) BS01 GLS 2.4.1.1 GO:0000166 ... P00489 11741774 MOAD: Ki=3.1uM
    PDBbind: -logKd/Ki=5.51, Ki=3.1uM
    BindingDB: Ki=3100nM, IC50=3100nM
    395 1gi2:A (1.38) BS02 122 3.4.21.4 GO:0004175 ... P00760 11292354 BindingDB: Ki=3600nM
    396 1gi4:A (1.37) BS03 122 3.4.21.4 GO:0004175 ... P00760 11292354 MOAD: Ki=0.065uM
    PDBbind: -logKd/Ki=7.19, Ki=0.065uM
    BindingDB: Ki=3600nM
    397 1gi6:A (1.49) BS02 124 3.4.21.4 GO:0004175 ... P00760 11292354 MOAD: Ki=1.7uM
    PDBbind: -logKd/Ki=6.22, Ki=0.60uM
    BindingDB: Ki=1700nM
    398 1gih:A (2.8) BS01 1PU 2.7.11.22 GO:0000082 ... P24941 11335721 BindingDB: IC50=80nM
    399 1gii:A (2.0) BS01 1PU 2.7.11.22 GO:0000082 ... P24941 11335721 BindingDB: IC50=80nM
    400 1gj4:H (1.81) BS03 132 3.4.21.5 GO:0004252 ... P00734 11731301 PDBbind: -logKd/Ki=4.07, Ki=85uM
    BindingDB: Ki=60000nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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