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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    401 1c8k:A (1.76) BS02 CPB 2.4.1.1 GO:0000166 ... P00489 10924512 MOAD: ic50=1uM
    PDBbind: -logKd/Ki=6.00, IC50=1uM
    BindingDB: IC50=1200nM
    402 1c8l:A (2.3) BS02 BIN 2.4.1.1 GO:0000166 ... P00489 11368311 MOAD: ic50=6.9nM
    PDBbind: -logKd/Ki=8.16, IC50=6.9nM
    403 1c8l:A (2.3) BS03 CFF 2.4.1.1 GO:0000166 ... P00489 11368311 MOAD: ic50=0.45mM
    BindingDB: IC50=114000nM
    404 1c8v:A (2.2) BS01 HE1 4.2.1.20 GO:0000162 ... P00929 10504236 MOAD: ic50=472nM
    PDBbind: -logKd/Ki=6.33, IC50=472nM
    405 1c9d:A (2.3) BS01 HF1 4.2.1.20 GO:0000162 ... P00929 10504236 MOAD: ic50=499nM
    PDBbind: -logKd/Ki=6.30, IC50=499nM
    406 1c9h:A (2.0) BS01 RAP 5.2.1.8 GO:0002027 ... P68106 10713512 BindingDB: Kd=0.200000nM
    407 1ca8:B (2.1) BS03 0KV 3.4.21.5 GO:0004252 ... P00734 9724521 PDBbind: -logKd/Ki=9.49, Ki=0.32nM
    BindingDB: IC50=0.67nM
    408 1cah:A (1.88) BS02 BCT 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 1474587 BindingDB: Ki=85000000nM
    409 1cam:A (1.7) BS02 BCT 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 7901850 BindingDB: Ki=85000000nM
    410 1can:A (1.9) BS01 NO3 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 1336460 BindingDB: Ki=35000000nM
    411 1caq:A (1.8) BS06 DPS 3.4.24.17 GO:0004222 ... P08254 10422833 MOAD: Ki=19nM
    PDBbind: -logKd/Ki=7.72, Ki=19nM
    412 1cbr:A (2.9) BS01 REA ? GO:0005501 ... P62965 7704533 PDBbind: -logKd/Ki=9.40, Kd=0.4nM
    BindingDB: Kd=>200nM
    413 1cbr:B (2.9) BS01 REA ? GO:0005501 ... P62965 7704533 PDBbind: -logKd/Ki=9.40, Kd=0.4nM
    BindingDB: Kd=>200nM
    414 1cbx:A (2.0) BS02 BZS 3.4.17.1 GO:0004181 ... P00730 1738164 MOAD: Ki=0.45uM
    PDBbind: -logKd/Ki=6.35, Ki=0.45uM
    BindingDB: Ki=500nM
    415 1ce5:A (1.9) BS02 BEN 3.4.21.4 GO:0004175 ... P00760 10651279 MOAD: Ki=18.4uM
    PDBbind: -logKd/Ki=4.74, Ki=18.4uM
    416 1cea:A (2.06) BS01 ACA 3.4.21.7 N/A P00747 8611560 MOAD: Kd~11uM
    PDBbind: -logKd/Ki=4.96, Kd=11uM
    BindingDB: Ki=53000000nM, Kd=9000nM, IC50=105000nM
    417 1cea:B (2.06) BS01 ACA 3.4.21.7 N/A P00747 8611560 MOAD: Kd~11uM
    PDBbind: -logKd/Ki=4.96, Kd=11uM
    BindingDB: Ki=53000000nM, Kd=9000nM, IC50=105000nM
    418 1ceb:A (2.07) BS01 AMH 3.4.21.7 N/A P00747 8611560 MOAD: Kd~1uM
    PDBbind: -logKd/Ki=6.00, Kd=1uM
    BindingDB: Kd=1100nM, IC50=3100nM, Ki=25000000nM
    419 1ceb:B (2.07) BS01 AMH 3.4.21.7 N/A P00747 8611560 MOAD: Kd~1uM
    BindingDB: Kd=1100nM, IC50=3100nM, Ki=25000000nM
    420 1cet:A (2.05) BS01 CLQ 1.1.1.27 GO:0003824 ... Q27743 10187806 MOAD: Ki=1.3mM
    PDBbind: -logKd/Ki=2.89, Ki=1.3mM
    421 1cfv:H (2.1) BS01 E3G ? GO:0002250 ... P18524 9261086 MOAD: Ka~100000000M^-1
    422 1cgl:A (2.4) BS04 0ED 3.4.24.7 GO:0004222 ... P03956 8278810 MOAD: Ki=135nM
    PDBbind: -logKd/Ki=6.87, Ki=0.135uM
    423 1cgl:A (2.4) BS05 0ED 3.4.24.7 GO:0004222 ... P03956 8278810 MOAD: Ki=135nM
    PDBbind: -logKd/Ki=6.87, Ki=0.135uM
    424 1cgl:B (2.4) BS01 0ED 3.4.24.7 GO:0004222 ... P03956 8278810 MOAD: Ki=135nM
    425 1cgl:B (2.4) BS05 0ED 3.4.24.7 GO:0004222 ... P03956 8278810 MOAD: Ki=135nM
    426 1ch8:A (2.5) BS02 GPX 6.3.4.4 GO:0000166 ... P0A7D4 10364182 PDBbind: -logKd/Ki=7.00, Ki=0.1uM
    427 1chm:A (1.9) BS01 CMS 3.5.3.3 GO:0016787 ... P38488 1696320 MOAD: Ki=0.22mM
    428 1chm:A (1.9) BS02 CMS 3.5.3.3 GO:0016787 ... P38488 1696320 MOAD: Ki=0.22mM
    429 1chm:B (1.9) BS01 CMS 3.5.3.3 GO:0016787 ... P38488 1696320 MOAD: Ki=0.22mM
    430 1chm:B (1.9) BS02 CMS 3.5.3.3 GO:0016787 ... P38488 1696320 MOAD: Ki=0.22mM
    431 1cil:A (1.6) BS02 ETS 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 8142888 MOAD: Ki=0.372nM
    PDBbind: -logKd/Ki=9.43, Ki=0.37nM
    BindingDB: Ki=9nM, IC50=26.61nM, Kd=0.043000nM
    432 1cim:A (2.1) BS02 PTS 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 8142888 MOAD: Ki=1.52nM
    PDBbind: -logKd/Ki=8.82, Ki=1.52nM
    BindingDB: Ki=1.5nM
    433 1cin:A (2.1) BS02 MTS 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 8142888 MOAD: Ki=1.88nM
    PDBbind: -logKd/Ki=8.73, Ki=1.88nM
    BindingDB: Ki=1.9nM
    434 1cit:A (2.7) BS01 dna ? GO:0003700 ... P22829 10331876 PDBbind: Kd=1nM
    435 1cit:A (2.7) BS02 dna ? GO:0003700 ... P22829 10331876 PDBbind: Kd=1nM
    436 1ciz:A (1.64) BS06 DPS 3.4.24.17 GO:0004222 ... P08254 10422833 MOAD: Ki=36nM
    PDBbind: -logKd/Ki=7.44, Ki=36nM
    437 1cj1:A (3.0) BS01 C78 ? N/A P62993 10395476 PDBbind: -logKd/Ki=8.80, IC50=1.6nM
    438 1cjb:A (2.0) BS01 IRP 2.4.2.22
    2.4.2.8    		 GO:0000166 ... P20035 10433693 MOAD: Kd=1nM
    439 1cjb:B (2.0) BS01 IRP 2.4.2.22
    2.4.2.8    		 GO:0000166 ... P20035 10433693 MOAD: Kd=1nM
    440 1cjb:C (2.0) BS01 IRP 2.4.2.22
    2.4.2.8    		 GO:0000166 ... P20035 10433693 MOAD: Kd=1nM
    441 1cjb:D (2.0) BS01 IRP 2.4.2.22
    2.4.2.8    		 GO:0000166 ... P20035 10433693 MOAD: Kd=1nM
    442 1ckp:A (2.05) BS01 PVB 2.7.11.22 GO:0000082 ... P24941 9677190 BindingDB: IC50=6nM
    443 1clu:A (1.7) BS01 DBG 3.6.5.2 GO:0003924 ... P01112 10359839 MOAD: Kd=5.4nM
    PDBbind: -logKd/Ki=8.27, Kd=5.4nM
    444 1cm0:A (2.3) BS01 COA 2.3.1.48
    2.3.1.57    		 GO:0004402 ... Q92831 10393169 BindingDB: IC50=41910nM
    445 1cm0:B (2.3) BS01 COA 2.3.1.48
    2.3.1.57    		 GO:0004402 ... Q92831 10393169 BindingDB: IC50=41910nM
    446 1cnw:A (2.0) BS02 EG1 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 7608893 MOAD: Kd=19nM
    PDBbind: -logKd/Ki=7.72, Kd=19nM
    447 1cnx:A (1.9) BS02 EG2 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 7608893 MOAD: Kd=43nM
    PDBbind: -logKd/Ki=7.37, Kd=43nM
    448 1cny:A (2.3) BS02 EG3 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 7608893 MOAD: Kd=14nM
    PDBbind: -logKd/Ki=7.85, Kd=14nM
    449 1cp6:A (1.9) BS03 BUB 3.4.11.10 GO:0006508 ... Q01693 10413478 MOAD: Ki=10uM
    PDBbind: -logKd/Ki=5.00, Ki=10uM
    450 1cps:A (2.25) BS02 CPM 3.4.17.1 GO:0004181 ... P00730 1527041 MOAD: Ki=0.22uM
    PDBbind: -logKd/Ki=6.66, Ki=0.22uM
    451 1cqe:A (3.1) BS02 FLP 1.14.99.1 GO:0004601 ... P05979 8121489 BindingDB: IC50=150nM, Ki=1000nM
    452 1cqe:B (3.1) BS02 FLP 1.14.99.1 GO:0004601 ... P05979 8121489 BindingDB: IC50=150nM, Ki=1000nM
    453 1cqp:A (2.6) BS02 803 ? N/A P20701 10493852 PDBbind: -logKd/Ki=5.62, IC50=2.4uM
    BindingDB: Kd=12900nM, IC50=2400nM
    454 1cqp:A (2.6) BS03 803 ? N/A P20701 10493852 PDBbind: -logKd/Ki=5.62, IC50=2.4uM
    BindingDB: Kd=12900nM, IC50=2400nM
    455 1cqp:B (2.6) BS01 803 ? N/A P20701 10493852 BindingDB: Kd=12900nM, IC50=2400nM
    456 1cqp:B (2.6) BS03 803 ? N/A P20701 10493852 BindingDB: Kd=12900nM, IC50=2400nM
    457 1cr6:A (2.8) BS01 CPU 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34914 10485878 PDBbind: -logKd/Ki=8.51, Ki=3.1nM
    458 1cs4:A (2.5) BS04 101 4.6.1.1 GO:0009190 ... P30803 11087399 PDBbind: -logKd/Ki=5.57, IC50=2.7uM
    459 1cs4:B (2.5) BS03 101 4.6.1.1 GO:0009190 ... P26769 11087399 MOAD: ic50=2.7uM
    PDBbind: -logKd/Ki=5.57, IC50=2.7uM
    460 1csh:A (1.65) BS02 AMX 2.3.3.1 GO:0004108 ... P23007 8011640 MOAD: Ki=28nM
    PDBbind: -logKd/Ki=7.55, Ki=28nM
    461 1csi:A (1.7) BS02 CMX 2.3.3.1 GO:0004108 ... P23007 8011640 MOAD: Ki=1.6nM
    PDBbind: -logKd/Ki=8.80, Ki=1.6nM
    462 1csr:A (1.7) BS02 FAM 2.3.3.1 GO:0004108 ... P23007 7492547 MOAD: Ki=42nM
    PDBbind: -logKd/Ki=7.38, Ki=42nM
    463 1css:A (1.7) BS02 FCX 2.3.3.1 GO:0004108 ... P23007 7492547 MOAD: Ki=0.8uM
    PDBbind: -logKd/Ki=6.10, Ki=0.8uM
    464 1ct8:A (2.2) BS01 TAA ? GO:0005576 ... P01837 10574796 PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    465 1ct8:B (2.2) BS01 TAA ? N/A P01868 10574796 MOAD: Kd=0.3uM
    PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    466 1ct8:B (2.2) BS02 TAA ? N/A P01868 10574796 MOAD: Kd=0.3uM
    PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    467 1ct8:C (2.2) BS01 TAA ? GO:0005576 ... P01837 10574796 PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    468 1ct8:D (2.2) BS01 TAA ? N/A P01868 10574796 MOAD: Kd=0.3uM
    PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    469 1ct8:D (2.2) BS02 TAA ? N/A P01868 10574796 MOAD: Kd=0.3uM
    PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    470 1ctr:A (2.45) BS05 TFP ? GO:0000086 ... P0DP23 7803388 PDBbind: -logKd/Ki=6.00, Kd=1uM
    BindingDB: Kd=1000nM
    471 1ctt:A (2.2) BS02 DHZ 3.5.4.5 GO:0001884 ... P0ABF6 7718553 MOAD: Ki=30uM
    PDBbind: -logKd/Ki=4.52, Ki=30uM
    472 1ctu:A (2.3) BS02 ZEB 3.5.4.5 GO:0001884 ... P0ABF6 7718553 MOAD: Ki=1.2pM
    PDBbind: -logKd/Ki=11.92, Ki=1.2pM
    473 1cva:A (2.25) BS02 AZI 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 8262987 BindingDB: Ki=1500000nM
    474 1cw2:A (2.0) BS01 HSP 4.2.1.20 GO:0000162 ... P00929 10504236 MOAD: ic50=715nM
    PDBbind: -logKd/Ki=6.15, IC50=715nM
    475 1cws:A (2.0) BS01 WO4 3.1.3.48 GO:0004725 ... P30305 10543950 BindingDB: IC50=30000nM
    476 1cx9:A (2.3) BS01 NHP 4.2.1.20 GO:0000162 ... P00929 10504236 MOAD: ic50=178nM
    PDBbind: -logKd/Ki=6.75, IC50=178nM
    477 1czc:A (2.5) BS02 GUA 2.6.1.1 GO:0003824 ... P00509 10731702 MOAD: Kd=1.5mM
    PDBbind: -logKd/Ki=2.82, Kd=1.5mM
    478 1czh:A (1.86) BS01 FMN ? GO:0009055 ... P10340 10610792 MOAD: Ka=3500000000M^-1
    479 1czk:A (1.9) BS01 FMN ? GO:0009055 ... P10340 10610792 MOAD: Kd=1.5nM
    PDBbind: -logKd/Ki=8.82, Kd=1.5nM
    480 1czl:A (1.8) BS01 FMN ? GO:0009055 ... P10340 10610792 MOAD: Ka=1400000000M^-1
    PDBbind: -logKd/Ki=9.15, Kd=0.71nM
    481 1czo:A (1.85) BS01 FMN ? GO:0009055 ... P10340 10610792 MOAD: Ka=35000M^-1
    PDBbind: -logKd/Ki=4.55, Kd=28uM
    482 1czr:A (1.9) BS01 FMN ? GO:0009055 ... P10340 10610792 MOAD: Kd=1nM
    PDBbind: -logKd/Ki=9.00, Kd=1.0nM
    483 1d04:A (1.85) BS01 FMN ? GO:0009055 ... P10340 10610792 MOAD: Ka=38000M^-1
    PDBbind: -logKd/Ki=4.59, Kd=26uM
    484 1d09:A (2.1) BS01 PAL 2.1.3.2 GO:0004070 ... P0A786 10651286 MOAD: Ki=27nM
    PDBbind: -logKd/Ki=7.57, Ki=27nM
    485 1d09:C (2.1) BS01 PAL 2.1.3.2 GO:0004070 ... P0A786 10651286 MOAD: Ki=27nM
    486 1d0c:A (1.65) BS03 INE 1.14.13.39 GO:0004517 ... P29473 11695891 BindingDB: IC50=2000nM
    487 1d0c:A (1.65) BS04 INE 1.14.13.39 GO:0004517 ... P29473 11695891 BindingDB: IC50=2000nM
    488 1d0c:A (1.65) BS05 INE 1.14.13.39 GO:0004517 ... P29473 11695891 BindingDB: IC50=2000nM
    489 1d0c:B (1.65) BS02 INE 1.14.13.39 GO:0004517 ... P29473 11695891 BindingDB: IC50=2000nM
    490 1d0c:B (1.65) BS03 INE 1.14.13.39 GO:0004517 ... P29473 11695891 BindingDB: IC50=2000nM
    491 1d0c:B (1.65) BS05 INE 1.14.13.39 GO:0004517 ... P29473 11695891 BindingDB: IC50=2000nM
    492 1d0o:A (1.95) BS03 INE 1.14.13.39 GO:0004517 ... P29473 11695891 BindingDB: IC50=2000nM
    493 1d0o:A (1.95) BS04 INE 1.14.13.39 GO:0004517 ... P29473 11695891 BindingDB: IC50=2000nM
    494 1d0o:A (1.95) BS05 INE 1.14.13.39 GO:0004517 ... P29473 11695891 BindingDB: IC50=2000nM
    495 1d0o:B (1.95) BS02 INE 1.14.13.39 GO:0004517 ... P29473 11695891 BindingDB: IC50=2000nM
    496 1d0o:B (1.95) BS03 INE 1.14.13.39 GO:0004517 ... P29473 11695891 BindingDB: IC50=2000nM
    497 1d0o:B (1.95) BS05 INE 1.14.13.39 GO:0004517 ... P29473 11695891 BindingDB: IC50=2000nM
    498 1d1p:A (2.2) BS01 EPE 3.1.3.2
    3.1.3.48    		 GO:0003993 ... P40347 10684639 PDBbind: -logKd/Ki=3.60, Ki=0.25mM
    499 1d1w:A (2.0) BS04 ATQ 1.14.13.39 GO:0004517 ... P29473 11051558 MOAD: Ki=0.35uM
    500 1d1w:B (2.0) BS05 ATQ 1.14.13.39 GO:0004517 ... P29473 11051558 MOAD: Ki=0.35uM
    501 1d2e:A (1.94) BS01 GDP ? GO:0003746 ... P49410 10715211 MOAD: Kd=1uM
    PDBbind: -logKd/Ki=6.00, Kd=1uM
    502 1d2e:B (1.94) BS01 GDP ? GO:0003746 ... P49410 10715211 MOAD: Kd=1uM
    503 1d2e:C (1.94) BS01 GDP ? GO:0003746 ... P49410 10715211 MOAD: Kd=1uM
    504 1d2e:D (1.94) BS01 GDP ? GO:0003746 ... P49410 10715211 MOAD: Kd=1uM
    505 1d2s:A (1.55) BS02 DHT ? N/A P04278 10675319 PDBbind: -logKd/Ki=9.74, Kd=0.182nM
    BindingDB: IC50=3.8nM, Kd=0.182000nM
    506 1d3d:B (2.04) BS03 BZT 3.4.21.5 GO:0004252 ... P00734 10739244 MOAD: Ka=1240000000M^-1
    PDBbind: -logKd/Ki=9.09, Kd=0.81nM
    BindingDB: Ki=2.1nM
    507 1d3g:A (1.6) BS01 BRE 1.3.5.2 GO:0004151 ... Q02127 10673429 BindingDB: IC50=7nM
    508 1d3h:A (1.8) BS01 A26 1.3.5.2 GO:0004151 ... Q02127 10673429 BindingDB: IC50=300nM
    509 1d3p:B (2.1) BS03 BT3 3.4.21.5 GO:0004252 ... P00734 10739244 MOAD: Ka=24300000M^-1
    PDBbind: -logKd/Ki=7.39, Kd=41nM
    510 1d3q:B (2.9) BS03 BT2 3.4.21.5 GO:0004252 ... P00734 10739244 PDBbind: -logKd/Ki=6.54, Kd=0.29uM
    511 1d3t:B (3.0) BS03 BT1 3.4.21.5 GO:0004252 ... P00734 10739244 BindingDB: Ki=374nM
    512 1d3v:A (1.7) BS03 ABH 3.5.3.1 GO:0000050 ... P07824 10542097 MOAD: Kd=0.11uM
    PDBbind: -logKd/Ki=6.96, Kd=0.11uM
    513 1d3v:B (1.7) BS03 ABH 3.5.3.1 GO:0000050 ... P07824 10542097 MOAD: Kd=0.11uM
    514 1d4h:A (1.81) BS01 BEH 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 PDBbind: -logKd/Ki=10.00, Ki=0.10nM
    515 1d4h:B (1.81) BS01 BEH 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 MOAD: Ki=0.1nM
    PDBbind: -logKd/Ki=10.00, Ki=0.10nM
    516 1d4i:A (1.81) BS01 BEG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 MOAD: Ki=1.4nM
    PDBbind: -logKd/Ki=8.85, Ki=1.40nM
    517 1d4i:B (1.81) BS01 BEG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 PDBbind: -logKd/Ki=8.85, Ki=1.40nM
    518 1d4j:A (1.81) BS01 MSC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 PDBbind: -logKd/Ki=8.36, Ki=4.40nM
    519 1d4j:B (1.81) BS01 MSC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 MOAD: Ki=4.4nM
    PDBbind: -logKd/Ki=8.36, Ki=4.40nM
    520 1d4k:A (1.85) BS01 PI8 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 11000004 MOAD: Ki=0.6nM
    PDBbind: -logKd/Ki=9.22, Ki=0.6nM
    521 1d4k:B (1.85) BS01 PI8 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 11000004 PDBbind: -logKd/Ki=9.22, Ki=0.6nM
    522 1d4l:A (1.75) BS01 PI9 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 11000004 MOAD: Ki=1.7nM
    PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    523 1d4l:B (1.75) BS01 PI9 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 11000004 PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    524 1d4p:B (2.07) BS03 BPP 3.4.21.5 GO:0004252 ... P00734 9232642 MOAD: Ka=2000000M^-1
    PDBbind: -logKd/Ki=6.30, Kd=0.5uM
    525 1d4s:A (2.5) BS01 TPV 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 8893827 MOAD: Ki=0.008nM
    526 1d4y:A (1.97) BS01 TPV 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 8893827 MOAD: Ki=0.008nM
    PDBbind: -logKd/Ki=11.10, Ki=0.008nM
    527 1d4y:B (1.97) BS01 TPV 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 8893827 PDBbind: -logKd/Ki=11.10, Ki=0.008nM
    528 1d5j:A (2.6) BS06 MM3 3.4.24.17 GO:0004222 ... P08254 10579818 PDBbind: -logKd/Ki=9.15, IC50=0.7nM
    529 1d6h:A (2.15) BS01 COA 2.3.1.74 GO:0009058 ... P30074 10653632 MOAD: Kd=128nM
    530 1d6n:A (2.7) BS02 PPO 2.4.2.8 GO:0000166 ... P00492 10338013 PDBbind: -logKd/Ki=4.50, Ki=31.5uM
    531 1d6s:A (2.3) BS02 PLP 2.5.1.47 GO:0004124 ... P0A1E3 10452898 PDBbind: -logKd/Ki=4.11, Kd=78uM
    532 1d6v:H (2.0) BS01 HOP ? N/A P01857 10651626 MOAD: Kd=670nM
    PDBbind: -logKd/Ki=6.17, Kd=670nM
    533 1d6v:L (2.0) BS01 HOP ? GO:0002250 ... P01834 10651626 PDBbind: -logKd/Ki=6.17, Kd=670nM
    534 1d6w:A (2.0) BS02 00R 3.4.21.5 GO:0004252 ... P00734 10713516 MOAD: Ki=1100nM
    PDBbind: -logKd/Ki=5.96, Ki=1100nM
    535 1d7i:A (1.9) BS01 DSS 5.2.1.8 GO:0000413 ... P62942 10656803 MOAD: Kd=250uM
    PDBbind: -logKd/Ki=3.60, Kd=250uM
    536 1d7i:B (1.9) BS01 DSS 5.2.1.8 GO:0000413 ... P62942 10656803 MOAD: Kd=250uM
    537 1d7j:A (1.85) BS01 BUQ 5.2.1.8 GO:0000413 ... P62942 10656803 MOAD: Kd=500uM
    PDBbind: -logKd/Ki=3.30, Kd=500uM
    538 1d7j:B (1.85) BS01 BUQ 5.2.1.8 GO:0000413 ... P62942 10656803 MOAD: Kd=500uM
    539 1d7x:A (2.0) BS06 SPC 3.4.24.17 GO:0004222 ... P08254 10639284 PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=19nM
    540 1d7x:B (2.0) BS06 SPC 3.4.24.17 GO:0004222 ... P08254 10639284 PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=19nM
    541 1d8a:A (2.2) BS02 TCL 1.3.1.9 GO:0004318 ... P0AEK4 10201369 BindingDB: IC50=430nM
    542 1d8a:B (2.2) BS02 TCL 1.3.1.9 GO:0004318 ... P0AEK4 10201369 BindingDB: IC50=430nM
    543 1d8f:B (2.4) BS06 SPI 3.4.24.17 GO:0004222 ... P08254 10669564 MOAD: ic50=18nM
    PDBbind: -logKd/Ki=7.74, IC50=18nM
    BindingDB: IC50=18nM
    544 1d8m:B (2.44) BS06 BBH 3.4.24.17 GO:0004222 ... P08254 11327577 PDBbind: -logKd/Ki=8.51, IC50=3.1nM
    BindingDB: IC50=3.1nM
    545 1d9i:A (2.3) BS02 00P 3.4.21.5 GO:0004252 ... P00734 10713516 MOAD: Ki=0.78nM
    PDBbind: -logKd/Ki=9.11, Ki=0.78nM
    546 1daj:A (2.3) BS02 MOT 1.5.1.3 GO:0004146 ... P16184 15299851 MOAD: Ki=6.5nM
    547 1dar:A (2.4) BS01 GDP ? GO:0003746 ... Q5SHN5 8736554 MOAD: Kd=11uM
    PDBbind: -logKd/Ki=4.96, Kd=11uM
    548 1db1:A (1.8) BS01 VDX ? GO:0003677 ... P11473 10678179 MOAD: Kd=0.55nM
    PDBbind: -logKd/Ki=9.26, Kd=0.55nM
    BindingDB: EC50=10nM, IC50=1.1nM, Kd=0.065nM
    549 1db4:A (2.2) BS03 8IN 3.1.1.4 GO:0004623 ... P14555 7664108 PDBbind: -logKd/Ki=7.24, IC50=0.057uM
    BindingDB: IC50=57.0nM
    550 1db5:A (2.8) BS03 6IN 3.1.1.4 GO:0004623 ... P14555 7664108 PDBbind: -logKd/Ki=6.82, IC50=0.152uM
    BindingDB: IC50=69000nM
    551 1dbb:H (2.7) BS01 STR ? N/A P01868 8496956 PDBbind: -logKd/Ki=9.00, Kd=1nM
    552 1dbb:L (2.7) BS01 STR N/A N/A N/A 8496956 PDBbind: -logKd/Ki=9.00, Kd=1nM
    553 1dbj:H (2.7) BS01 AE2 ? N/A P01868 8413674 PDBbind: -logKd/Ki=7.68, IC50=21nM
    554 1dbk:H (3.0) BS01 ANO ? N/A P01868 8413674 PDBbind: -logKd/Ki=8.10, IC50=8nM
    555 1dbt:A (2.4) BS01 U5P 4.1.1.23 GO:0004590 ... P25971 10681442 MOAD: Ki=0.46mM
    556 1dbt:A (2.4) BS02 U5P 4.1.1.23 GO:0004590 ... P25971 10681442 MOAD: Ki=0.46mM
    557 1dbt:B (2.4) BS01 U5P 4.1.1.23 GO:0004590 ... P25971 10681442 MOAD: Ki=0.46mM
    558 1dbt:B (2.4) BS02 U5P 4.1.1.23 GO:0004590 ... P25971 10681442 MOAD: Ki=0.46mM
    559 1dbt:C (2.4) BS01 U5P 4.1.1.23 GO:0004590 ... P25971 10681442 MOAD: Ki=0.46mM
    560 1dcy:A (2.7) BS03 I3N 3.1.1.4 GO:0004623 ... P14555 7664108 BindingDB: IC50=13600nM
    561 1dd7:A (2.25) BS03 1PM 1.14.13.39 GO:0004517 ... P29477 10677491 MOAD: ic50=28nM
    562 1ddr:A (2.45) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 9260285 BindingDB: IC50=8.8nM, EC50=1nM
    563 1ddr:B (2.45) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 9260285 BindingDB: IC50=8.8nM, EC50=1nM
    564 1dds:A (2.2) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 9260285 BindingDB: IC50=8.8nM, EC50=1nM
    565 1dds:B (2.2) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 9260285 BindingDB: IC50=8.8nM, EC50=1nM
    566 1deh:B (2.2) BS03 NAD 1.1.1.105 GO:0001523 ... P00325 8663387 MOAD: Kd=1.9uM
    567 1det:A (1.8) BS01 2GP 4.6.1.24 GO:0001411 ... P00651 8679590 MOAD: Kd=50uM
    PDBbind: -logKd/Ki=4.30, Kd=50uM
    568 1df1:A (2.35) BS04 ITU 1.14.13.39 GO:0004517 ... P29477 10562539 BindingDB: Ki=5.2nM
    569 1df1:B (2.35) BS03 ITU 1.14.13.39 GO:0004517 ... P29477 10562539 BindingDB: Ki=5.2nM
    570 1df7:A (1.7) BS02 MTX 1.5.1.3 GO:0004146 ... P9WNX1 10623528 MOAD: Ki=11nM
    BindingDB: IC50=8.8nM
    571 1df8:A (1.51) BS01 BTN ? GO:0009374 ... P22629 10850797 MOAD: Kd=0.2nM
    PDBbind: -logKd/Ki=9.70, Kd=0.20nM
    BindingDB: Kd=1.000000nM
    572 1df8:B (1.51) BS01 BTN ? GO:0009374 ... P22629 10850797 MOAD: Kd=0.2nM
    BindingDB: Kd=1.000000nM
    573 1dfo:A (2.4) BS02 FFO 2.1.2.1 GO:0003824 ... P0A825 10656824 PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    574 1dfo:A (2.4) BS04 FFO 2.1.2.1 GO:0003824 ... P0A825 10656824 PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    575 1dfo:B (2.4) BS02 FFO 2.1.2.1 GO:0003824 ... P0A825 10656824 PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    576 1dfo:B (2.4) BS04 FFO 2.1.2.1 GO:0003824 ... P0A825 10656824 PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    577 1dfo:B (2.4) BS05 FFO 2.1.2.1 GO:0003824 ... P0A825 10656824 PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    578 1dg5:A (2.0) BS02 TOP 1.5.1.3 GO:0004146 ... P9WNX1 10623528 MOAD: Ki=88uM
    BindingDB: IC50=88000nM
    579 1dg7:A (1.8) BS01 WRB 1.5.1.3 GO:0004146 ... P9WNX1 10623528 MOAD: Ki=187nM
    580 1dgm:A (1.8) BS02 ADN 2.7.1.20 GO:0004001 ... Q9TVW2 10794412 PDBbind: -logKd/Ki=5.05, Ki=8.9uM
    BindingDB: Ki=8900nM
    581 1dh3:A (3.0) BS01 dna ? GO:0003677 ... Q01147 10952992 PDBbind: Kd=1.4nM
    582 1dh3:C (3.0) BS01 dna ? GO:0003677 ... Q01147 10952992 PDBbind: Kd=1.4nM
    583 1dhi:A (1.9) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 8265622 MOAD: Kd=55nM
    PDBbind: -logKd/Ki=7.26, Kd=55nM
    BindingDB: IC50=8.8nM, EC50=1nM
    584 1dhi:B (1.9) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 8265622 MOAD: Kd=55nM
    PDBbind: -logKd/Ki=7.26, Kd=55nM
    BindingDB: IC50=8.8nM, EC50=1nM
    585 1dhj:A (1.8) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 8265622 MOAD: Kd=281nM
    PDBbind: -logKd/Ki=6.55, Kd=281nM
    BindingDB: IC50=8.8nM, EC50=1nM
    586 1dhj:B (1.8) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 8265622 MOAD: Kd=281nM
    PDBbind: -logKd/Ki=6.55, Kd=281nM
    BindingDB: IC50=8.8nM, EC50=1nM
    587 1di8:A (2.2) BS01 DTQ 2.7.11.22 GO:0000082 ... P24941 10633045 MOAD: ic50=1uM
    PDBbind: -logKd/Ki=6.00, IC50=1uM
    BindingDB: IC50=1000nM
    588 1di9:A (2.6) BS01 MSQ 2.7.11.24 GO:0000077 ... Q16539 10633045 PDBbind: -logKd/Ki=5.30, IC50=5uM
    589 1dia:A (2.2) BS02 L24 1.5.1.5
    3.5.4.9
    6.3.4.3    		 GO:0003824 ... P11586 10828945 MOAD: Ki=455uM
    590 1dib:A (2.7) BS02 L34 1.5.1.5
    3.5.4.9
    6.3.4.3    		 GO:0003824 ... P11586 10828945 BindingDB: IC50=96nM
    591 1dif:A (1.7) BS01 A85 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 8551523 PDBbind: -logKd/Ki=10.66, Ki=22pM
    592 1dif:B (1.7) BS01 A85 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 8551523 MOAD: Ki=22pM
    PDBbind: -logKd/Ki=10.66, Ki=22pM
    593 1dig:A (2.2) BS02 L37 1.5.1.5
    3.5.4.9
    6.3.4.3    		 GO:0003824 ... P11586 10828945 MOAD: Ki=431uM
    594 1dih:A (2.2) BS01 NDP 1.17.1.8 GO:0005737 ... P04036 7893645 MOAD: Kd=2.12uM
    595 1dis:A (-1.00) BS01 BDM 1.5.1.3 GO:0004146 ... P00381 7547901 PDBbind: -logKd/Ki=11.00, Ki<0.01nM
    596 1djx:A (2.3) BS03 I3P 3.1.4.11 GO:0004435 ... P10688 9048554 MOAD: Kd=1.7uM
    597 1djx:B (2.3) BS03 I3P 3.1.4.11 GO:0004435 ... P10688 9048554 MOAD: Kd=1.7uM
    598 1dl7:H (2.35) BS01 NCH ? GO:0002250 ... P01820 10859335 PDBbind: -logKd/Ki=6.49, Kd=0.32uM
    599 1dl7:L (2.35) BS01 NCH ? GO:0002250 ... P01724 10859335 MOAD: Kd=0.32uM
    PDBbind: -logKd/Ki=6.49, Kd=0.32uM
    600 1dlr:A (2.3) BS02 MXA 1.5.1.3 GO:0000900 ... P00374 7890613 MOAD: Ki=16.4nM
    BindingDB: IC50=0.61nM, Ki=0.025nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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