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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    31601 5cu0:A (2.18) BS03 54G 2.7.11.1 GO:0004672 ... P68400 28495381 BindingDB: Kd=58000nM
    31602 5cu0:B (2.18) BS03 54G 2.7.11.1 GO:0004672 ... P68400 28495381 BindingDB: Kd=58000nM
    31603 5cu2:A (1.705) BS04 54G 2.7.11.1 GO:0004672 ... P68400 28495381 PDBbind: -logKd/Ki=4.24, Kd=58uM
    BindingDB: Kd=58000nM
    31604 5cu2:B (1.705) BS03 54G 2.7.11.1 GO:0004672 ... P68400 28495381 BindingDB: Kd=58000nM
    31605 5cu3:A (1.787) BS01 54S 2.7.11.1 GO:0004672 ... P68400 28451126 MOAD: Kd=0.32uM
    BindingDB: Kd=320nM, IC50=670nM
    31606 5cu3:B (1.787) BS01 54S 2.7.11.1 GO:0004672 ... P68400 28451126 MOAD: Kd=0.32uM
    BindingDB: Kd=320nM, IC50=670nM
    31607 5cu4:A (1.56) BS01 54S 2.7.11.1 GO:0004672 ... P68400 28451126 MOAD: Kd=0.32uM
    PDBbind: -logKd/Ki=6.49, Kd=0.320uM
    BindingDB: Kd=320nM, IC50=670nM
    31608 5cuh:A (1.83) BS06 LTQ 3.4.24.35 GO:0004222 ... P14780 26871660 PDBbind: -logKd/Ki=4.62, IC50=24uM
    BindingDB: IC50=24000nM
    31609 5cuh:B (1.83) BS06 LTQ 3.4.24.35 GO:0004222 ... P14780 26871660 BindingDB: IC50=24000nM
    31610 5cuq:A (1.696) BS01 NSC 3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0004482 ... C0LMU0 26726314 MOAD: ic50=7.7uM
    PDBbind: -logKd/Ki=5.92, IC50=1.2uM
    31611 5cuq:B (1.696) BS01 NSC 3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0004482 ... C0LMU0 26726314 MOAD: ic50=7.7uM
    31612 5cuu:A (2.96) BS01 4GA 3.6.1.1 GO:0000287 ... Q4JH30 N/A PDBbind: -logKd/Ki=4.37, IC50=42.3uM
    31613 5cw8:A (2.6) BS01 55X ? GO:0000976 ... P96856 26858250 PDBbind: -logKd/Ki=7.22, Kd=60nM
    31614 5cw8:B (2.6) BS01 55X ? GO:0000976 ... P96856 26858250 PDBbind: -logKd/Ki=7.22, Kd=60nM
    31615 5cwa:A (2.1) BS01 0GA 4.1.3.27 GO:0000162 ... P9WFX2 26527146 MOAD: ic50=17uM
    PDBbind: -logKd/Ki=4.77, IC50=17uM
    31616 5cxa:A (1.3) BS06 55L 3.4.24.65 GO:0004222 ... P39900 27996256 PDBbind: -logKd/Ki=8.05, Kd=9nM
    31617 5cxh:A (1.9) BS01 55M 2.7.10.2 GO:0004672 ... P43405 26320624 MOAD: ic50=5nM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    BindingDB: IC50=132nM
    31618 5cxi:A (2.0) BS01 5TW ? GO:0000976 ... P96856 26858250 MOAD: Kd=280nM
    PDBbind: -logKd/Ki=6.55, Kd=280nM
    31619 5cxi:B (2.0) BS01 5TW ? GO:0000976 ... P96856 26858250 MOAD: Kd=280nM
    PDBbind: -logKd/Ki=6.55, Kd=280nM
    31620 5cxk:A (1.9) BS02 BCT 4.2.1.1 GO:0004089 ... A0A086SLX8 26627652 BindingDB: Ki=5900000nM
    31621 5cxk:B (1.9) BS02 BCT 4.2.1.1 GO:0004089 ... A0A086SLX8 26627652 BindingDB: Ki=5900000nM
    31622 5cxk:C (1.9) BS02 BCT 4.2.1.1 GO:0004089 ... A0A086SLX8 26627652 BindingDB: Ki=5900000nM
    31623 5cxk:D (1.9) BS02 BCT 4.2.1.1 GO:0004089 ... A0A086SLX8 26627652 BindingDB: Ki=5900000nM
    31624 5cxk:G (1.9) BS02 BCT 4.2.1.1 GO:0004089 ... A0A086SLX8 26627652 BindingDB: Ki=5900000nM
    31625 5cxk:H (1.9) BS02 BCT 4.2.1.1 GO:0004089 ... A0A086SLX8 26627652 BindingDB: Ki=5900000nM
    31626 5cxz:A (1.7) BS01 55U 2.7.10.2 GO:0004672 ... P43405 26320624 MOAD: ic50=552nM
    PDBbind: -logKd/Ki=6.26, IC50=552nM
    BindingDB: IC50=34nM
    31627 5cy3:A (1.76) BS01 55Y 2.7.10.2 GO:0004672 ... P43405 26320624 MOAD: ic50=16nM
    PDBbind: -logKd/Ki=7.80, IC50=16nM
    BindingDB: IC50=16nM
    31628 5cy9:A (1.55) BS01 E0A ? N/A O60885 26731490 MOAD: Kd=0.218uM
    PDBbind: -logKd/Ki=6.66, Kd=0.218uM
    BindingDB: Kd=218nM, IC50=730nM
    31629 5cyi:A (2.0) BS01 55S 2.7.11.22 GO:0000082 ... P24941 26320860 PDBbind: -logKd/Ki=5.88, Kd=1.31uM
    BindingDB: IC50=160nM, Kd=720nM
    31630 5cyi:C (2.0) BS01 55S 2.7.11.22 GO:0000082 ... P24941 26320860 BindingDB: IC50=160nM, Kd=720nM
    31631 5cyv:A (1.52) BS01 WCA ? GO:0003700 ... Q0S6D0 26400178 PDBbind: -logKd/Ki=4.96, Kd=11uM
    31632 5cyv:A (1.52) BS02 WCA ? GO:0003700 ... Q0S6D0 26400178 PDBbind: -logKd/Ki=4.96, Kd=11uM
    31633 5cyv:B (1.52) BS01 WCA ? GO:0003700 ... Q0S6D0 26400178 MOAD: Kd=11uM
    PDBbind: -logKd/Ki=4.96, Kd=11uM
    31634 5cyv:B (1.52) BS02 WCA ? GO:0003700 ... Q0S6D0 26400178 MOAD: Kd=11uM
    PDBbind: -logKd/Ki=4.96, Kd=11uM
    31635 5czb:A (1.96) BS01 55W 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 27520942 MOAD: ic50=0.0257uM
    PDBbind: -logKd/Ki=8.00, IC50=0.0099uM
    31636 5czb:B (1.96) BS01 55W 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 27520942 MOAD: ic50=0.0257uM
    31637 5czk:A (2.39) BS01 57Z 3.2.1.31 GO:0004553 ... P05804 26364932 MOAD: Ki=1.9uM
    BindingDB: Ki=1.9e+3nM
    31638 5czk:B (2.39) BS01 57Z 3.2.1.31 GO:0004553 ... P05804 26364932 MOAD: Ki=1.9uM
    BindingDB: Ki=1.9e+3nM
    31639 5czm:A (1.303) BS06 R47 3.4.24.65 GO:0004222 ... P39900 27996256 PDBbind: -logKd/Ki=8.32, Kd=4.8nM
    BindingDB: Ki=0.260000nM
    31640 5d0c:A (1.49) BS01 E0B ? N/A O60885 26731490 MOAD: Kd=2.34uM
    PDBbind: -logKd/Ki=5.63, Kd=2.340uM
    BindingDB: Kd=2340nM, IC50=3180nM
    31641 5d0r:A (2.24) BS01 B1T 4.6.1.1 GO:0009190 ... Q96PN6 26961873 MOAD: Kd=0.43uM
    PDBbind: -logKd/Ki=6.37, Kd=0.43uM
    31642 5d10:A (2.7) BS01 563 2.7.10.2 GO:0004672 ... P00523 26275028 PDBbind: -logKd/Ki=7.14, IC50=0.072uM
    31643 5d11:A (2.3) BS01 56G 2.7.10.2 GO:0004672 ... P00523 26275028 PDBbind: -logKd/Ki=7.55, IC50=0.028uM
    31644 5d12:A (3.0) BS01 G97 2.7.10.2 GO:0004672 ... P00523 26275028 PDBbind: -logKd/Ki=7.37, IC50=0.043uM
    31645 5d1b:A (2.9) BS02 TSN 3.5.1.-
    3.5.1.98    		 GO:0000118 ... Q9BY41 26463496 BindingDB: IC50=90nM, Ki=45nM, Kd=3.9e+2nM
    31646 5d1b:A (2.9) BS03 TSN 3.5.1.-
    3.5.1.98    		 GO:0000118 ... Q9BY41 26463496 BindingDB: IC50=90nM, Ki=45nM, Kd=3.9e+2nM
    31647 5d1b:B (2.9) BS01 TSN 3.5.1.-
    3.5.1.98    		 GO:0000118 ... Q9BY41 26463496 BindingDB: IC50=90nM, Ki=45nM, Kd=3.9e+2nM
    31648 5d1b:B (2.9) BS03 TSN 3.5.1.-
    3.5.1.98    		 GO:0000118 ... Q9BY41 26463496 BindingDB: IC50=90nM, Ki=45nM, Kd=3.9e+2nM
    31649 5d1j:A (1.8) BS01 56H 2.7.11.22 GO:0000082 ... P24941 15027863 MOAD: ic50=48nM
    PDBbind: -logKd/Ki=7.32, IC50=48nM
    BindingDB: IC50=48nM, Kd=69nM, Ki=38nM
    31650 5d1n:A (2.713) BS01 SAH ? N/A C7Q5P8 26609134 PDBbind: -logKd/Ki=5.57, Kd=2.7uM
    31651 5d1r:A (2.0) BS02 56S ? GO:0000976 ... P9WMC9 26396194 PDBbind: -logKd/Ki=4.84, Kd=14.4uM
    31652 5d1r:B (2.0) BS01 56S ? GO:0000976 ... P9WMC9 26396194 PDBbind: -logKd/Ki=4.84, Kd=14.4uM
    31653 5d1s:A (2.1) BS01 56Q 3.4.24.83 GO:0008237 ... P15917 26492514 MOAD: ic50=9.6uM
    PDBbind: -logKd/Ki=5.02, IC50=9.6uM
    BindingDB: IC50=37000nM
    31654 5d1t:A (2.2) BS02 56R 3.4.24.83 GO:0008237 ... P15917 26492514 MOAD: ic50=1.7uM
    PDBbind: -logKd/Ki=5.77, IC50=1.7uM
    31655 5d1u:A (2.8503) BS01 56P 3.4.24.83 GO:0008237 ... P15917 26492514 PDBbind: -logKd/Ki=5.96, IC50=1.1uM
    31656 5d1w:A (3.59) BS01 PLM ? GO:0000976 ... O05892 26396194 PDBbind: -logKd/Ki=5.12, Kd=7.5uM
    31657 5d21:A (1.9) BS02 56N ? GO:0005737 ... Q05097 26416170 PDBbind: -logKd/Ki=8.38, Kd=4.2nM
    31658 5d24:A (1.65) BS01 L26 ? N/A O60885 26731611 MOAD: Kd=5.8uM
    PDBbind: -logKd/Ki=5.24, Kd=5.8uM
    BindingDB: Kd=5800nM
    31659 5d25:A (1.7) BS01 56M ? N/A O60885 26731611 MOAD: Kd=0.46uM
    PDBbind: -logKd/Ki=6.30, Kd=0.50uM
    BindingDB: Kd=460nM
    31660 5d26:A (1.82) BS01 L28 ? N/A O60885 26731611 MOAD: Kd=0.81uM
    PDBbind: -logKd/Ki=6.09, Kd=0.81uM
    BindingDB: Kd=810nM
    31661 5d29:A (1.8) BS04 5Q1 3.4.17.21 GO:0004180 ... Q04609 27074627 MOAD: ic50=97nM
    PDBbind: -logKd/Ki=7.01, IC50=97nM
    BindingDB: IC50=97nM
    31662 5d2a:A (2.134) BS04 ZDC ? GO:0030246 ... Q9HYN5 29896342 PDBbind: -logKd/Ki=5.59, Kd=2570nM
    31663 5d2a:B (2.134) BS03 ZDC ? GO:0030246 ... Q9HYN5 29896342 PDBbind: -logKd/Ki=5.59, Kd=2570nM
    31664 5d2r:A (1.9) BS04 56W ? GO:0046872 ... B5ZAD9 26735022 MOAD: Ki=1.5uM
    PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    31665 5d39:A (3.2) BS01 dna ? GO:0003677 ... P42226 27803324 PDBbind: Kd=1.8uM
    31666 5d39:A (3.2) BS02 dna ? GO:0003677 ... P42226 27803324 PDBbind: Kd=1.8uM
    31667 5d39:B (3.2) BS01 dna ? GO:0003677 ... P42226 27803324 PDBbind: Kd=1.8uM
    31668 5d39:B (3.2) BS02 dna ? GO:0003677 ... P42226 27803324 PDBbind: Kd=1.8uM
    31669 5d39:C (3.2) BS01 dna ? GO:0003677 ... P42226 27803324 PDBbind: Kd=1.8uM
    31670 5d39:C (3.2) BS02 dna ? GO:0003677 ... P42226 27803324 PDBbind: Kd=1.8uM
    31671 5d39:D (3.2) BS01 dna ? GO:0003677 ... P42226 27803324 PDBbind: Kd=1.8uM
    31672 5d39:D (3.2) BS02 dna ? GO:0003677 ... P42226 27803324 PDBbind: Kd=1.8uM
    31673 5d3c:A (1.314) BS06 56O 3.4.24.65 GO:0004222 ... P39900 27996256 PDBbind: -logKd/Ki=10.40, Kd=40pM
    31674 5d3f:B (2.74) BS02 FSC ? GO:0000122 ... P63104 26888287 BindingDB: Kd=700nM
    31675 5d3g:A (2.3) BS01 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 26296781 PDBbind: Kd=163pM
    31676 5d3g:C (2.3) BS01 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 26296781 PDBbind: Kd=163pM
    31677 5d3h:A (1.7) BS01 57G ? N/A O60885 26731611 MOAD: Kd=7.9uM
    PDBbind: -logKd/Ki=5.10, Kd=7.9uM
    BindingDB: Kd=7900nM
    31678 5d3j:A (1.7) BS01 L33 ? N/A O60885 26731611 MOAD: Kd=5.7uM
    PDBbind: -logKd/Ki=5.24, Kd=5.7uM
    BindingDB: Kd=5700nM
    31679 5d3l:A (1.5) BS01 57F ? N/A O60885 26731611 MOAD: Kd=0.88uM
    PDBbind: -logKd/Ki=6.06, Kd=0.88uM
    BindingDB: Kd=880nM
    31680 5d3n:A (2.15) BS01 L40 ? N/A O60885 26731611 MOAD: Kd=9.2uM
    PDBbind: -logKd/Ki=5.04, Kd=9.2uM
    BindingDB: Kd=9200nM
    31681 5d3p:A (1.95) BS01 57E ? N/A O60885 26731611 MOAD: Kd=7.4uM
    PDBbind: -logKd/Ki=5.13, Kd=7.4uM
    31682 5d3s:A (1.75) BS01 579 ? N/A O60885 26731611 MOAD: Kd=1.3uM
    PDBbind: -logKd/Ki=5.89, Kd=1.3uM
    BindingDB: Kd=1300nM
    31683 5d3t:A (1.93) BS01 56Y ? N/A O60885 26731611 MOAD: Kd=12uM
    PDBbind: -logKd/Ki=4.92, Kd=12uM
    BindingDB: Kd=12000nM
    31684 5d3u:A (1.45) BS02 TRP ? GO:0004497 ... C9ZDC6 27102675 MOAD: Kd=2.6uM
    31685 5d3u:B (1.45) BS02 TRP ? GO:0004497 ... C9ZDC6 27102675 MOAD: Kd=2.6uM
    31686 5d3x:A (1.69) BS01 4IP ? N/A Q8TCU6 27150042 MOAD: Kd=440nM
    PDBbind: -logKd/Ki=6.36, Kd=440nM
    31687 5d3x:B (1.69) BS01 4IP ? N/A Q8TCU6 27150042 MOAD: Kd=440nM
    31688 5d3y:A (1.95) BS01 4IP ? N/A Q8TCU6 27150042 MOAD: Kd=440nM
    31689 5d3y:B (1.95) BS01 4IP ? N/A Q8TCU6 27150042 MOAD: Kd=440nM
    31690 5d40:A (1.51) BS02 TRP ? GO:0004497 ... C9ZDC6 27102675 MOAD: Kd=4.9uM
    31691 5d40:B (1.51) BS02 TRP ? GO:0004497 ... C9ZDC6 27102675 MOAD: Kd=4.9uM
    31692 5d41:A (2.31) BS03 57N 2.7.10.1 GO:0004672 ... P00533 27251290 MOAD: ic50=0.024uM
    BindingDB: IC50=>50000nM
    31693 5d45:A (1.65) BS01 57P ? GO:0005324 ... P15090 27096055 MOAD: Ki=0.12uM
    PDBbind: -logKd/Ki=6.92, Ki=0.12uM
    BindingDB: Ki=120nM
    31694 5d47:A (1.7) BS01 L19 ? GO:0005324 ... P15090 27096055 MOAD: Ki=0.1uM
    PDBbind: -logKd/Ki=7.00, Ki=0.10uM
    BindingDB: Ki=100nM
    31695 5d48:A (1.81) BS01 L96 ? GO:0005324 ... P15090 27096055 MOAD: Ki=0.03uM
    PDBbind: -logKd/Ki=7.52, Ki=0.03uM
    BindingDB: Ki=30nM
    31696 5d4a:A (1.7) BS01 57Q ? GO:0005324 ... P15090 27096055 PDBbind: -logKd/Ki=5.85, Ki>1.4uM
    BindingDB: Ki=>1400nM
    31697 5d4r:A (2.07) BS01 dna ? GO:0003700 ... P96711 26511320 PDBbind: Kd=247.6nM
    31698 5d4r:A (2.07) BS02 dna ? GO:0003700 ... P96711 26511320 PDBbind: Kd=247.6nM
    31699 5d4r:B (2.07) BS01 dna ? GO:0003700 ... P96711 26511320 PDBbind: Kd=247.6nM
    31700 5d4r:B (2.07) BS02 dna ? GO:0003700 ... P96711 26511320 PDBbind: Kd=247.6nM
    31701 5d4s:A (1.972) BS01 dna ? GO:0003700 ... P96711 26511320 PDBbind: Kd=277nM
    31702 5d4s:A (1.972) BS02 dna ? GO:0003700 ... P96711 26511320 PDBbind: Kd=277nM
    31703 5d4s:B (1.972) BS01 dna ? GO:0003700 ... P96711 26511320 PDBbind: Kd=277nM
    31704 5d4s:B (1.972) BS02 dna ? GO:0003700 ... P96711 26511320 PDBbind: Kd=277nM
    31705 5d6e:A (1.49) BS01 94A 3.4.11.18 GO:0006508 ... P50579 26686773 PDBbind: -logKd/Ki=4.30, IC50>50uM
    31706 5d6f:A (1.55) BS01 57R 3.4.11.18 GO:0006508 ... P50579 26686773 PDBbind: -logKd/Ki=4.37, IC50=43uM
    31707 5d6j:A (2.25) BS01 ATP 6.2.1.20 GO:0005524 ... A0R618 26628098 MOAD: Kd=36uM
    PDBbind: -logKd/Ki=4.44, Kd=36uM
    31708 5d6p:A (2.05) BS01 57U 5.6.2.2 GO:0003677 ... P0A0K8 26460684 MOAD: ic50=2.5uM
    PDBbind: -logKd/Ki=5.60, IC50=2.5uM
    BindingDB: IC50=2500nM
    31709 5d6p:B (2.05) BS01 57U 5.6.2.2 GO:0003677 ... P0A0K8 26460684 MOAD: ic50=2.5uM
    BindingDB: IC50=2500nM
    31710 5d6q:B (1.5) BS01 57V 5.6.2.2 GO:0003677 ... P0A0K8 26460684 MOAD: ic50=5.8uM
    PDBbind: -logKd/Ki=5.24, IC50=5.8uM
    BindingDB: IC50=5800nM
    31711 5d75:A (1.83) BS01 FK5 5.2.1.8 GO:0003755 ... Q00688 26749369 MOAD: Ki=200nM
    PDBbind: -logKd/Ki=6.70, Ki=200nM
    31712 5d7a:A (2.9) BS01 58C 2.7.11.1 GO:0004672 ... Q9UKE5 27562646 PDBbind: -logKd/Ki=7.68, IC50=21nM
    31713 5d7c:A (1.55) BS01 57W 5.6.2.2 GO:0003677 ... P0A0K8 26460684 MOAD: ic50=0.14uM
    PDBbind: -logKd/Ki=6.85, IC50=0.14uM
    BindingDB: IC50=140nM
    31714 5d7c:B (1.55) BS01 57W 5.6.2.2 GO:0003677 ... P0A0K8 26460684 MOAD: ic50=0.14uM
    BindingDB: IC50=140nM
    31715 5d7d:A (1.6) BS01 57X 5.6.2.2 GO:0003677 ... P0A0K8 26487916 BindingDB: IC50=6.0nM
    31716 5d7d:B (1.6) BS03 57X 5.6.2.2 GO:0003677 ... P0A0K8 26487916 BindingDB: IC50=6.0nM
    31717 5d7p:A (1.76) BS03 OCZ 2.3.1.-
    2.3.1.286    		 GO:0017136 ... Q8IXJ6 26625292 MOAD: ic50=20uM
    BindingDB: IC50=19600nM
    31718 5d7p:A (1.76) BS04 OCZ 2.3.1.-
    2.3.1.286    		 GO:0017136 ... Q8IXJ6 26625292 MOAD: ic50=20uM
    BindingDB: IC50=19600nM
    31719 5d7p:B (1.76) BS03 OCZ 2.3.1.-
    2.3.1.286    		 GO:0017136 ... Q8IXJ6 26625292 MOAD: ic50=20uM
    BindingDB: IC50=19600nM
    31720 5d7p:B (1.76) BS04 OCZ 2.3.1.-
    2.3.1.286    		 GO:0017136 ... Q8IXJ6 26625292 MOAD: ic50=20uM
    BindingDB: IC50=19600nM
    31721 5d7q:A (2.01) BS03 4I5 2.3.1.-
    2.3.1.286    		 GO:0017136 ... Q8IXJ6 26625292 MOAD: ic50=2.8uM
    BindingDB: IC50=2770nM
    31722 5d7q:A (2.01) BS04 4I5 2.3.1.-
    2.3.1.286    		 GO:0017136 ... Q8IXJ6 26625292 MOAD: ic50=2.8uM
    BindingDB: IC50=2770nM
    31723 5d7q:B (2.01) BS03 4I5 2.3.1.-
    2.3.1.286    		 GO:0017136 ... Q8IXJ6 26625292 MOAD: ic50=2.8uM
    BindingDB: IC50=2770nM
    31724 5d7q:B (2.01) BS04 4I5 2.3.1.-
    2.3.1.286    		 GO:0017136 ... Q8IXJ6 26625292 MOAD: ic50=2.8uM
    BindingDB: IC50=2770nM
    31725 5d7r:A (1.55) BS02 57Y 5.6.2.2 GO:0003677 ... P0A0K8 26487916 MOAD: ic50=0.013uM
    PDBbind: -logKd/Ki=7.89, IC50=0.013uM
    31726 5d7r:B (1.55) BS03 57Y 5.6.2.2 GO:0003677 ... P0A0K8 26487916 MOAD: ic50=0.013uM
    31727 5d7x:A (1.35) BS01 XZ8 ? N/A P55201 26982797 MOAD: Kd=15uM
    PDBbind: -logKd/Ki=4.82, Kd=15uM
    BindingDB: Kd=15000nM
    31728 5d8u:A (2.29) BS03 0N8 3.1.-.- GO:0003723 ... C3W5S0 26976575 MOAD: Kd=949nM
    31729 5d9f:A (1.91) BS01 58G 2.1.1.228 GO:0002939 ... P43912 N/A BindingDB: IC50=631nM
    31730 5d9j:A (1.85) BS03 0N8 3.1.-.- GO:0003723 ... C3W5S0 26976575 MOAD: Kd=22nM
    31731 5d9k:A (2.55) BS01 584 2.7.11.1 GO:0004672 ... P51812 26270416 PDBbind: -logKd/Ki=8.40, IC50=0.004uM
    BindingDB: IC50=4.0nM
    31732 5d9k:B (2.55) BS01 584 2.7.11.1 GO:0004672 ... P51812 26270416 BindingDB: IC50=4.0nM
    31733 5d9l:A (2.15) BS01 583 2.7.11.1 GO:0004672 ... P51812 26270416 MOAD: ic50=0.024uM
    PDBbind: -logKd/Ki=7.62, IC50=0.024uM
    31734 5d9p:A (1.8) BS01 NBG ? GO:0000272 ... O06842 26507654 PDBbind: -logKd/Ki=3.20, Kd=0.63mM
    31735 5d9y:A (1.971) BS01 dna 1.14.11.80 GO:0006211 ... Q6N021 26524525 PDBbind: Kd=0.9uM
    31736 5d9y:A (1.971) BS02 dna 1.14.11.80 GO:0006211 ... Q6N021 26524525 PDBbind: Kd=0.9uM
    31737 5da3:A (1.7) BS01 58V 2.7.10.2 GO:0004672 ... Q13882 27993680 MOAD: ic50=80nM
    PDBbind: -logKd/Ki=7.10, IC50=80nM
    BindingDB: IC50=>600nM
    31738 5dab:A (2.1) BS03 58W 1.14.11.-
    1.14.11.53    		 GO:0001659 ... Q9C0B1 N/A BindingDB: Kd=13000nM, IC50=4950nM
    31739 5db0:A (1.5) BS01 58P ? GO:0005634 ... O00255 26744767 MOAD: ic50=46nM
    PDBbind: -logKd/Ki=7.43, IC50=37nM
    31740 5db0:A (1.5) BS02 6E6 ? GO:0005634 ... O00255 26744767 MOAD: ic50=42nM
    31741 5db1:A (1.86) BS01 58O ? GO:0005634 ... O00255 26744767 MOAD: ic50=22nM
    PDBbind: -logKd/Ki=7.66, IC50=22nM
    31742 5db2:A (1.54) BS01 58R ? GO:0005634 ... O00255 26744767 MOAD: ic50=25nM
    PDBbind: -logKd/Ki=7.60, IC50=25nM
    31743 5db3:A (1.71) BS01 58Q ? GO:0005634 ... O00255 26744767 MOAD: ic50=12nM
    PDBbind: -logKd/Ki=7.92, IC50=12nM
    31744 5dbm:A (1.86) BS01 58N 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92793 27056325 MOAD: Kd=0.35uM
    PDBbind: -logKd/Ki=6.46, Kd=0.35uM
    BindingDB: IC50=456nM
    31745 5dbm:B (1.86) BS01 58N 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92793 27056325 MOAD: Kd=0.35uM
    BindingDB: IC50=456nM
    31746 5dbm:C (1.86) BS01 58N 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92793 27056325 MOAD: Kd=0.35uM
    BindingDB: IC50=456nM
    31747 5dby:A (2.35) BS01 DIF ? GO:0003677 ... P35747 26652101 MOAD: Ka=39000M^-1
    31748 5dby:A (2.35) BS02 NPS ? GO:0003677 ... P35747 26652101 MOAD: Ka=7730000M^-1
    31749 5dcz:A (2.23) BS02 59B 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 N/A PDBbind: -logKd/Ki=9.30, IC50=0.5nM
    31750 5dd9:A (1.62) BS01 59K ? GO:0005634 ... O00255 26288158 MOAD: ic50=779nM
    PDBbind: -logKd/Ki=6.11, IC50=779nM
    BindingDB: IC50=779nM
    31751 5dda:A (1.83) BS01 59M ? GO:0005634 ... O00255 26288158 MOAD: ic50=1653nM
    PDBbind: -logKd/Ki=5.78, IC50=1653nM
    BindingDB: IC50=1653nM
    31752 5ddb:A (1.54) BS01 59Q ? GO:0005634 ... O00255 26288158 MOAD: ic50=82nM
    PDBbind: -logKd/Ki=7.09, IC50=82nM
    BindingDB: IC50=82nM
    31753 5ddc:A (1.62) BS01 59V ? GO:0005634 ... O00255 26288158 MOAD: ic50=92nM
    PDBbind: -logKd/Ki=7.04, IC50=92nM
    BindingDB: IC50=92nM
    31754 5ddd:A (2.14) BS01 59X ? GO:0005634 ... O00255 26288158 MOAD: ic50=260nM
    PDBbind: -logKd/Ki=6.59, IC50=260nM
    BindingDB: IC50=260nM
    31755 5dde:A (1.78) BS01 5A0 ? GO:0005634 ... O00255 26288158 MOAD: ic50=65nM
    PDBbind: -logKd/Ki=7.19, IC50=65nM
    BindingDB: IC50=65nM
    31756 5dde:A (1.78) BS02 5A0 ? GO:0005634 ... O00255 26288158 MOAD: ic50=65nM
    PDBbind: -logKd/Ki=7.19, IC50=65nM
    BindingDB: IC50=65nM
    31757 5ddf:A (1.66) BS01 5A1 ? GO:0005634 ... O00255 26288158 MOAD: ic50=674nM
    PDBbind: -logKd/Ki=6.17, IC50=674nM
    BindingDB: IC50=674nM
    31758 5de1:A (2.25) BS02 59D 1.1.1.42 GO:0000287 ... O75874 26436839 MOAD: ic50=46nM
    BindingDB: IC50=15nM, EC50=85nM
    31759 5de1:B (2.25) BS02 59D 1.1.1.42 GO:0000287 ... O75874 26436839 MOAD: ic50=46nM
    BindingDB: IC50=15nM, EC50=85nM
    31760 5del:A (2.2) BS02 D59 1.3.5.2 GO:0004152 ... Q08210 25945708 MOAD: ic50=16nM
    BindingDB: IC50=151nM, Ki=30nM
    31761 5deu:A (1.801) BS01 dna 1.14.11.80 GO:0006211 ... Q6N021 26524525 PDBbind: Kd=1.08uM
    31762 5deu:A (1.801) BS02 dna 1.14.11.80 GO:0006211 ... Q6N021 26524525 PDBbind: Kd=1.08uM
    31763 5dew:A (1.9) BS01 59N 2.7.11.1 GO:0004672 ... Q13153 N/A BindingDB: Ki=1.9nM, IC50=124nM
    31764 5dew:B (1.9) BS01 59N 2.7.11.1 GO:0004672 ... Q13153 N/A BindingDB: Ki=1.9nM, IC50=124nM
    31765 5dex:B (2.4) BS01 5E0 ? GO:0015276 ... Q00959 28760974 MOAD: Ki=22.6nM
    PDBbind: -logKd/Ki=7.65, Ki=22.6nM
    31766 5dey:A (2.1) BS01 59T 2.7.11.1 GO:0004672 ... Q13153 26713112 MOAD: Ki=3.7nM
    PDBbind: -logKd/Ki=8.43, Ki=3.7nM
    BindingDB: Ki=3.7nM, IC50=69nM
    31767 5dey:B (2.1) BS01 59T 2.7.11.1 GO:0004672 ... Q13153 26713112 MOAD: Ki=3.7nM
    BindingDB: Ki=3.7nM, IC50=69nM
    31768 5df1:A (1.75) BS02 58X 1.3.1.122 GO:0005737 ... K7WDL7 26551396 MOAD: Ki=4uM
    31769 5df1:B (1.75) BS02 58X 1.3.1.122 GO:0005737 ... K7WDL7 26551396 MOAD: Ki=4uM
    31770 5dfc:A (1.5) BS01 EAM ? N/A P25440 26367539 BindingDB: IC50=32.5nM, Ki=74nM, Kd=100nM
    31771 5dfd:A (1.5) BS01 59E ? N/A P25440 26367539 BindingDB: Kd=45nM
    31772 5dfp:A (2.2) BS01 59U 2.7.11.1 GO:0004672 ... Q13153 26713112 MOAD: Ki=22nM
    PDBbind: -logKd/Ki=7.66, Ki=22nM
    BindingDB: Ki=22nM, IC50=222nM
    31773 5dg6:A (2.35) BS01 V66 2.7.7.48
    3.4.22.66
    3.6.1.15    		 GO:0004197 ... Q83883 26823007 PDBbind: -logKd/Ki=5.07, IC50=8.6uM
    31774 5dgj:A (1.0) BS01 V64 2.7.7.48
    3.4.22.66
    3.6.1.15    		 GO:0004197 ... Q83883 26823007 PDBbind: -logKd/Ki=4.73, IC50=18.5uM
    31775 5dgm:F (2.86) BS01 59Z 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 26457482 PDBbind: -logKd/Ki=6.40, IC50=0.4uM
    31776 5dgn:F (2.08) BS01 59Y 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 26381451 MOAD: ic50=1.2uM
    31777 5dgu:A (1.22) BS01 5B7 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 26462551 MOAD: Ki=0.0045nM
    PDBbind: -logKd/Ki=11.35, Ki=0.0045nM
    31778 5dgu:B (1.22) BS01 5B7 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 26462551 PDBbind: -logKd/Ki=11.35, Ki=0.0045nM
    31779 5dgw:A (1.62) BS01 5B5 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 26462551 MOAD: Ki=0.009nM
    PDBbind: -logKd/Ki=11.05, Ki=0.009nM
    31780 5dgw:B (1.62) BS01 5B5 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 26462551 PDBbind: -logKd/Ki=11.05, Ki=0.009nM
    31781 5dgz:A (2.502) BS01 L20 2.7.11.1 GO:0004672 ... P11309 26459208 MOAD: Ki=14nM
    PDBbind: -logKd/Ki=7.85, Ki=14nM
    31782 5dh3:A (2.468) BS01 5BS 2.7.11.1 GO:0004672 ... Q13188 27535619 MOAD: ic50=38.1nM
    PDBbind: -logKd/Ki=7.42, IC50=38.1nM
    31783 5dh3:B (2.468) BS01 5BS 2.7.11.1 GO:0004672 ... Q13188 27535619 MOAD: ic50=38.1nM
    31784 5dh4:A (2.2) BS02 5AV 3.1.4.17 GO:0004114 ... Q9Y233 26602277 MOAD: Ki=58nM
    PDBbind: -logKd/Ki=7.24, Ki=58nM
    BindingDB: Ki=58nM
    31785 5dh4:B (2.2) BS02 5AV 3.1.4.17 GO:0004114 ... Q9Y233 26602277 MOAD: Ki=58nM
    BindingDB: Ki=58nM
    31786 5dh5:A (2.0) BS02 5AY 3.1.4.17 GO:0004114 ... Q9Y233 26602277 MOAD: Ki=0.23nM
    PDBbind: -logKd/Ki=9.64, Ki=0.23nM
    BindingDB: Ki=0.32nM
    31787 5dh5:B (2.0) BS02 5AY 3.1.4.17 GO:0004114 ... Q9Y233 26602277 MOAD: Ki=0.23nM
    BindingDB: Ki=0.32nM
    31788 5dhg:A (3.0) BS01 DGV ? GO:0001626 ... P0ABE7
    P41146    		 26526853 PDBbind: -logKd/Ki=9.14, Ki=0.72nM
    31789 5dhh:A (3.004) BS01 DGW ? GO:0001626 ... P0ABE7
    P41146    		 26526853 PDBbind: -logKd/Ki=9.18, Ki=0.66nM
    31790 5dhj:A (2.457) BS01 5E5 2.7.11.1 GO:0004672 ... P11309 26459208 MOAD: Ki=0.2uM
    PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    31791 5dhp:A (2.27) BS01 5AQ 2.7.1.23 GO:0003951 ... Q8Y8D7 27783975 MOAD: Ki=140uM
    PDBbind: -logKd/Ki=3.85, Ki=140uM
    31792 5dhp:A (2.27) BS02 5AQ 2.7.1.23 GO:0003951 ... Q8Y8D7 27783975 MOAD: Ki=140uM
    PDBbind: -logKd/Ki=3.85, Ki=140uM
    31793 5dhp:B (2.27) BS01 5AQ 2.7.1.23 GO:0003951 ... Q8Y8D7 27783975 MOAD: Ki=140uM
    31794 5dhp:C (2.27) BS01 5AQ 2.7.1.23 GO:0003951 ... Q8Y8D7 27783975 MOAD: Ki=140uM
    31795 5dhp:C (2.27) BS02 5AQ 2.7.1.23 GO:0003951 ... Q8Y8D7 27783975 MOAD: Ki=140uM
    31796 5dhp:D (2.27) BS01 5AQ 2.7.1.23 GO:0003951 ... Q8Y8D7 27783975 MOAD: Ki=140uM
    31797 5dhp:D (2.27) BS02 5AQ 2.7.1.23 GO:0003951 ... Q8Y8D7 27783975 MOAD: Ki=140uM
    31798 5dhq:A (2.29) BS01 5AK 2.7.1.23 GO:0003951 ... Q8Y8D7 27783975 MOAD: Ki=2uM
    PDBbind: -logKd/Ki=5.70, Ki=2uM
    31799 5dhq:A (2.29) BS02 5AK 2.7.1.23 GO:0003951 ... Q8Y8D7 27783975 MOAD: Ki=2uM
    PDBbind: -logKd/Ki=5.70, Ki=2uM
    31800 5dhq:B (2.29) BS01 5AK 2.7.1.23 GO:0003951 ... Q8Y8D7 27783975 MOAD: Ki=2uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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