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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    25801 4luw:A (2.25) BS03 QJ8 1.14.13.39 GO:0004517 ... P29473 24145412 MOAD: Kd=2.1uM
    BindingDB: Ki=2179nM
    25802 4luw:B (2.25) BS05 QJ8 1.14.13.39 GO:0004517 ... P29473 24145412 MOAD: Kd=2.1uM
    BindingDB: Ki=2179nM
    25803 4lux:A (1.86) BS03 QJ8 1.14.13.39 GO:0004517 ... P29476 24145412 MOAD: Kd=0.1uM
    BindingDB: Ki=26nM
    25804 4lux:B (1.86) BS05 QJ8 1.14.13.39 GO:0004517 ... P29476 24145412 MOAD: Kd=0.1uM
    BindingDB: Ki=26nM
    25805 4luz:A (1.9) BS01 1XT ? GO:0003677 ... P27694 24147804 MOAD: Kd=20uM
    PDBbind: -logKd/Ki=4.70, Kd=20uM
    BindingDB: Kd=26000nM
    25806 4lv0:A (1.652) BS01 APB 3.5.2.6 GO:0008800 ... P00811 25344815 BindingDB: Ki=7300nM
    25807 4lv0:B (1.652) BS01 APB 3.5.2.6 GO:0008800 ... P00811 25344815 BindingDB: Ki=7300nM
    25808 4lv1:A (1.74) BS01 NL9 3.5.2.6 GO:0008800 ... P00811 25344815 PDBbind: -logKd/Ki=7.40, Ki=0.04uM
    25809 4lv1:A (1.74) BS02 NL9 3.5.2.6 GO:0008800 ... P00811 25344815 PDBbind: -logKd/Ki=7.40, Ki=0.04uM
    25810 4lv2:A (1.65) BS01 N95 3.5.2.6 GO:0008800 ... P00811 25344815 PDBbind: -logKd/Ki=8.00, Ki=0.01uM
    25811 4lv3:A (1.42) BS01 25N 3.5.2.6 GO:0008800 ... P00811 25344815 PDBbind: -logKd/Ki=5.49, Ki=3.2uM
    25812 4lv4:A (2.08) BS03 8HC 4.1.2.13 GO:0004332 ... P9WQA3 24325645 MOAD: Kd=9.39uM
    PDBbind: -logKd/Ki=5.00, IC50=10uM
    BindingDB: Kd=6940nM, IC50=14000nM
    25813 4lv9:A (1.807) BS01 20J 2.4.2.12 GO:0005125 ... P43490 24021463 BindingDB: Kd=230000nM
    25814 4lv9:A (1.807) BS02 20J 2.4.2.12 GO:0005125 ... P43490 24021463 BindingDB: Kd=230000nM
    25815 4lv9:B (1.807) BS01 20J 2.4.2.12 GO:0005125 ... P43490 24021463 BindingDB: Kd=230000nM
    25816 4lv9:B (1.807) BS02 20J 2.4.2.12 GO:0005125 ... P43490 24021463 BindingDB: Kd=230000nM
    25817 4lva:A (1.55) BS01 20M 2.4.2.12 GO:0005125 ... P43490 24021463 BindingDB: IC50=62nM
    25818 4lva:B (1.55) BS01 20M 2.4.2.12 GO:0005125 ... P43490 24021463 BindingDB: IC50=62nM
    25819 4lvb:A (1.836) BS01 20N 2.4.2.12 GO:0005125 ... P43490 24021463 BindingDB: Kd=78000nM
    25820 4lvb:B (1.836) BS01 20N 2.4.2.12 GO:0005125 ... P43490 24021463 BindingDB: Kd=78000nM
    25821 4lvd:A (1.75) BS01 1EB 2.4.2.12 GO:0005125 ... P43490 24021463 BindingDB: Kd=51000nM
    25822 4lvd:B (1.75) BS01 1EB 2.4.2.12 GO:0005125 ... P43490 24021463 BindingDB: Kd=51000nM
    25823 4lvg:A (1.702) BS01 20O 2.4.2.12 GO:0005125 ... P43490 24021463 BindingDB: IC50=6.0nM
    25824 4lvg:B (1.702) BS01 20O 2.4.2.12 GO:0005125 ... P43490 24021463 BindingDB: IC50=6.0nM
    25825 4lvt:A (2.05) BS01 1XJ ? GO:0042981 ... P10415 23291630 PDBbind: -logKd/Ki=10.36, Ki=44pM
    BindingDB: Ki=<1.000000nM, IC50=<15nM
    25826 4lvt:B (2.05) BS01 1XJ ? GO:0042981 ... P10415 23291630 BindingDB: Ki=<1.000000nM, IC50=<15nM
    25827 4lw1:A (1.631) BS01 1XS ? GO:0003677 ... P27694 24147804 MOAD: Kd=710uM
    PDBbind: -logKd/Ki=3.15, Kd=710uM
    BindingDB: Kd=710000nM
    25828 4lw1:A (1.631) BS02 1XS ? GO:0003677 ... P27694 24147804 MOAD: Kd=710uM
    PDBbind: -logKd/Ki=3.15, Kd=710uM
    BindingDB: Kd=710000nM
    25829 4lwa:A (2.06) BS02 Q13 1.14.14.47 GO:0004517 ... O34453 24145412 MOAD: Kd=1.1uM
    25830 4lwb:A (2.15) BS02 QJ8 1.14.14.47 GO:0004517 ... O34453 24145412 MOAD: Kd=4.4uM
    25831 4lwc:A (1.61) BS01 1XU ? GO:0003677 ... P27694 24147804 PDBbind: -logKd/Ki=6.72, Kd=0.19uM
    BindingDB: Kd=1.7nM
    25832 4lwe:A (1.5) BS01 FJ2 3.6.4.10 GO:0005524 ... P07900 25313505 PDBbind: -logKd/Ki=7.15, IC50=0.07uM
    BindingDB: IC50=70nM
    25833 4lwh:A (1.7) BS01 FJ5 3.6.4.10 GO:0005524 ... P07900 25313505 PDBbind: -logKd/Ki=7.57, IC50=0.027uM
    BindingDB: IC50=27nM
    25834 4lwi:A (1.7) BS01 FJ6 3.6.4.10 GO:0005524 ... P07900 25313505 PDBbind: -logKd/Ki=7.64, IC50=0.023uM
    BindingDB: IC50=23nM
    25835 4lwp:A (2.353) BS01 SAH ? GO:0005829 ... Q57U70 24498306 MOAD: Kd=45uM
    25836 4lwp:B (2.353) BS01 SAH ? GO:0005829 ... Q57U70 24498306 MOAD: Kd=45uM
    25837 4lwt:A (1.6) BS01 20Q 2.3.2.27 GO:0005634 ... P56273 24997575 MOAD: ic50=3.9uM
    PDBbind: -logKd/Ki=5.41, IC50=3.9uM
    25838 4lwu:A (1.14) BS01 20U 2.3.2.27 GO:0005634 ... P56273 24997575 MOAD: ic50=0.005uM
    PDBbind: -logKd/Ki=8.30, IC50=0.005uM
    25839 4lwv:A (2.32) BS01 20W 2.3.2.27 GO:0005634 ... P56273 24900784 MOAD: ic50=7nM
    PDBbind: -logKd/Ki=8.22, IC50=6nM
    25840 4lwv:B (2.32) BS01 20W 2.3.2.27 GO:0005634 ... P56273 24900784 MOAD: ic50=7nM
    25841 4lwv:C (2.32) BS01 20W 2.3.2.27 GO:0005634 ... P56273 24900784 MOAD: ic50=7nM
    25842 4lww:A (1.641) BS01 LWW 2.4.2.12 GO:0005125 ... P43490 24279990 MOAD: ic50=29nM
    PDBbind: -logKd/Ki=7.54, IC50=29nM
    BindingDB: IC50=29nM
    25843 4lww:B (1.641) BS01 LWW 2.4.2.12 GO:0005125 ... P43490 24279990 MOAD: ic50=29nM
    PDBbind: -logKd/Ki=7.54, IC50=29nM
    BindingDB: IC50=29nM
    25844 4lxa:A (1.95) BS01 1YS 3.4.23.46 GO:0004190 ... P56817 23981898 MOAD: ic50=0.002uM
    PDBbind: -logKd/Ki=8.70, IC50=2nM
    25845 4lxa:B (1.95) BS01 1YS 3.4.23.46 GO:0004190 ... P56817 23981898 MOAD: ic50=0.002uM
    25846 4lxa:C (1.95) BS01 1YS 3.4.23.46 GO:0004190 ... P56817 23981898 MOAD: ic50=0.002uM
    25847 4lxb:H (1.61) BS03 7R9 3.4.21.5 GO:0004252 ... P00734 24175584 MOAD: ic50=7nM
    PDBbind: -logKd/Ki=8.15, IC50=7nM
    25848 4lxd:A (1.9) BS01 1XV ? GO:0042981 ... P10415 23291630 PDBbind: -logKd/Ki=7.23, Ki=59nM
    BindingDB: Ki=59nM
    25849 4lxk:A (2.05) BS01 1YT 3.4.23.46 GO:0004190 ... P56817 23981898 MOAD: ic50=0.004uM
    PDBbind: -logKd/Ki=8.40, IC50=4nM
    25850 4lxk:B (2.05) BS01 1YT 3.4.23.46 GO:0004190 ... P56817 23981898 MOAD: ic50=0.004uM
    25851 4lxk:C (2.05) BS01 1YT 3.4.23.46 GO:0004190 ... P56817 23981898 MOAD: ic50=0.004uM
    25852 4lxm:A (2.3) BS01 1YU 3.4.23.46 GO:0004190 ... P56817 23981898 MOAD: ic50=0.088uM
    PDBbind: -logKd/Ki=7.06, IC50=0.088uM
    25853 4lxm:B (2.3) BS01 1YU 3.4.23.46 GO:0004190 ... P56817 23981898 MOAD: ic50=0.088uM
    25854 4lxm:C (2.3) BS01 1YU 3.4.23.46 GO:0004190 ... P56817 23981898 MOAD: ic50=0.088uM
    25855 4lxz:A (1.85) BS03 SHH 3.5.1.-
    3.5.1.98    		 GO:0004407 ... Q92769 23897821 MOAD: Kd=0.182uM
    PDBbind: -logKd/Ki=6.74, Kd=0.182uM
    BindingDB: IC50=921nM, Kd=182nM, Ki=40nM
    25856 4lxz:B (1.85) BS03 SHH 3.5.1.-
    3.5.1.98    		 GO:0004407 ... Q92769 23897821 MOAD: Kd=0.182uM
    BindingDB: IC50=921nM, Kd=182nM, Ki=40nM
    25857 4lxz:C (1.85) BS03 SHH 3.5.1.-
    3.5.1.98    		 GO:0004407 ... Q92769 23897821 MOAD: Kd=0.182uM
    BindingDB: IC50=921nM, Kd=182nM, Ki=40nM
    25858 4ly1:A (1.57) BS03 20Y 3.5.1.-
    3.5.1.98    		 GO:0004407 ... Q92769 23897821 MOAD: Kd=0.0552uM
    PDBbind: -logKd/Ki=7.26, Kd=0.0552uM
    BindingDB: IC50=100nM, Ki=1.5nM, Kd=55.2nM
    25859 4ly1:B (1.57) BS03 20Y 3.5.1.-
    3.5.1.98    		 GO:0004407 ... Q92769 23897821 MOAD: Kd=0.0552uM
    BindingDB: IC50=100nM, Ki=1.5nM, Kd=55.2nM
    25860 4ly1:C (1.57) BS03 20Y 3.5.1.-
    3.5.1.98    		 GO:0004407 ... Q92769 23897821 MOAD: Kd=0.0552uM
    BindingDB: IC50=100nM, Ki=1.5nM, Kd=55.2nM
    25861 4ly9:A (2.35) BS02 1YY ? GO:0004857 ... Q14397 24226772 MOAD: Kd=0.007uM
    PDBbind: -logKd/Ki=8.15, Kd=7nM
    BindingDB: IC50=21nM
    25862 4ly9:B (2.35) BS02 1YY ? GO:0004857 ... Q14397 24226772 MOAD: Kd=0.007uM
    BindingDB: IC50=21nM
    25863 4lyn:A (2.0) BS01 1YG 2.7.11.22 GO:0000082 ... P24941 12190313 PDBbind: -logKd/Ki=7.22, IC50=0.06uM
    BindingDB: IC50=60nM
    25864 4lys:A (1.83) BS01 2SJ ? N/A O60885 24272870 PDBbind: -logKd/Ki=4.34, Kd=46uM
    25865 4lyw:A (1.95) BS01 21Q ? N/A O60885 24272870 MOAD: Kd=237nM
    PDBbind: -logKd/Ki=6.63, Kd=237nM
    BindingDB: Kd=240nM
    25866 4lzj:B (2.405) BS01 22H 4.2.1.126 GO:0006040 ... P44862 24251551 MOAD: Ki=0.23mM
    25867 4lzj:D (2.405) BS02 22H 4.2.1.126 GO:0006040 ... P44862 24251551 MOAD: Ki=0.23mM
    25868 4lzr:A (1.85) BS01 LOC ? N/A O60885 24272870 MOAD: Kd=20uM
    PDBbind: -logKd/Ki=4.70, Kd=20uM
    25869 4lzs:A (2.2) BS01 L46 ? N/A O60885 24272870 MOAD: Kd=16uM
    PDBbind: -logKd/Ki=4.80, Kd=16uM
    BindingDB: Kd=6800nM
    25870 4m0e:A (2.0) BS01 1YL 3.1.1.7 GO:0001507 ... P22303 24900610 MOAD: Ki=0.7uM
    PDBbind: -logKd/Ki=6.22, Ki=0.6uM
    BindingDB: Ki=600nM, IC50=1000nM
    25871 4m0e:B (2.0) BS01 1YL 3.1.1.7 GO:0001507 ... P22303 24900610 MOAD: Ki=0.7uM
    BindingDB: Ki=600nM, IC50=1000nM
    25872 4m0f:A (2.304) BS01 1YK 3.1.1.7 GO:0001507 ... P22303 24900610 MOAD: Ki=1.7nM
    PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    BindingDB: Ki=1.7nM, IC50=8nM
    25873 4m0f:B (2.304) BS01 1YK 3.1.1.7 GO:0001507 ... P22303 24900610 MOAD: Ki=1.7nM
    BindingDB: Ki=1.7nM, IC50=8nM
    25874 4m0r:A (1.96) BS01 644 2.4.2.18 GO:0000162 ... P9WFX5 24623674 MOAD: Ki=6.2uM
    PDBbind: -logKd/Ki=5.21, Ki=6.2uM
    25875 4m0r:B (1.96) BS01 644 2.4.2.18 GO:0000162 ... P9WFX5 24623674 MOAD: Ki=6.2uM
    25876 4m0y:A (1.7) BS01 M0Y 2.7.10.2 GO:0004672 ... Q08881 24593284 MOAD: Kd=0.35uM
    PDBbind: -logKd/Ki=6.46, Kd=0.35uM
    25877 4m0y:A (1.7) BS02 M0Y 2.7.10.2 GO:0004672 ... Q08881 24593284 MOAD: Kd=0.35uM
    PDBbind: -logKd/Ki=6.46, Kd=0.35uM
    25878 4m0z:A (2.0) BS01 M0Z 2.7.10.2 GO:0004672 ... Q08881 24593284 MOAD: Kd=6.4uM
    PDBbind: -logKd/Ki=5.19, Kd=6.4uM
    25879 4m0z:A (2.0) BS02 M0Z 2.7.10.2 GO:0004672 ... Q08881 24593284 MOAD: Kd=6.4uM
    PDBbind: -logKd/Ki=5.19, Kd=6.4uM
    25880 4m11:A (2.45) BS02 MXM 1.14.99.1 GO:0001516 ... Q05769 24425867 MOAD: ic50=150nM
    BindingDB: IC50=151nM
    25881 4m11:B (2.45) BS02 MXM 1.14.99.1 GO:0001516 ... Q05769 24425867 MOAD: ic50=150nM
    BindingDB: IC50=151nM
    25882 4m11:C (2.45) BS02 MXM 1.14.99.1 GO:0001516 ... Q05769 24425867 MOAD: ic50=150nM
    BindingDB: IC50=151nM
    25883 4m11:D (2.45) BS02 MXM 1.14.99.1 GO:0001516 ... Q05769 24425867 MOAD: ic50=150nM
    BindingDB: IC50=151nM
    25884 4m12:A (2.15) BS01 1YZ 2.7.10.2 GO:0004672 ... Q08881 24593284 MOAD: Kd=0.9uM
    PDBbind: -logKd/Ki=6.05, Kd=0.9uM
    25885 4m13:A (1.85) BS01 1E0 2.7.10.2 GO:0004672 ... Q08881 24593284 MOAD: Kd=0.2uM
    PDBbind: -logKd/Ki=6.70, Kd=0.2uM
    25886 4m14:A (1.55) BS01 QWS 2.7.10.2 GO:0004672 ... Q08881 24593284 PDBbind: -logKd/Ki=6.70, Kd=0.2uM
    25887 4m14:A (1.55) BS02 QWS 2.7.10.2 GO:0004672 ... Q08881 24593284 PDBbind: -logKd/Ki=6.70, Kd=0.2uM
    25888 4m1j:C (1.8) BS01 B0S 3.5.1.97 GO:0016787 ... Q9I194 23883096 PDBbind: -logKd/Ki=9.70, Ki=0.20nM
    25889 4m2r:A (1.993) BS02 BZ1 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 24090602 MOAD: Ki=3.2nM
    PDBbind: -logKd/Ki=8.49, Ki=3.2nM
    BindingDB: Ki=3nM, IC50=3.2nM, Kd=0.13nM
    25890 4m2u:A (1.999) BS02 ETS 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 24090602 MOAD: Ki=9.1nM
    PDBbind: -logKd/Ki=8.04, Ki=9.1nM
    BindingDB: Ki=9nM, IC50=26.61nM, Kd=0.043000nM
    25891 4m2v:A (1.718) BS02 BZ1 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 24090602 PDBbind: -logKd/Ki=7.44, Ki=36nM
    BindingDB: Ki=3nM, IC50=3.2nM, Kd=0.13nM
    25892 4m2w:A (1.658) BS02 ETS 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 24090602 PDBbind: -logKd/Ki=7.28, Ki=52nM
    BindingDB: Ki=9nM, IC50=26.61nM, Kd=0.043000nM
    25893 4m3b:A (2.001) BS01 2B2 ? GO:0000976 ... P9WMC1 24818704 MOAD: ic50=0.4uM
    PDBbind: -logKd/Ki=6.40, IC50=0.40uM
    25894 4m3d:A (1.9) BS01 2H2 ? GO:0000976 ... P9WMC1 24818704 MOAD: ic50=3.9uM
    PDBbind: -logKd/Ki=5.41, IC50=3.9uM
    25895 4m3e:A (2.109) BS01 2B3 ? GO:0000976 ... P9WMC1 24818704 MOAD: ic50=0.56uM
    PDBbind: -logKd/Ki=6.25, IC50=0.56uM
    25896 4m3f:A (2.0) BS01 2D1 ? GO:0000976 ... P9WMC1 24818704 MOAD: ic50=4.9uM
    PDBbind: -logKd/Ki=5.31, IC50=4.9uM
    25897 4m3g:A (2.3) BS01 2G1 ? GO:0000976 ... P9WMC1 24818704 MOAD: ic50=0.55uM
    PDBbind: -logKd/Ki=6.26, IC50=0.55uM
    25898 4m3m:A (2.1) BS01 22N 3.2.1.18 GO:0004308 ... Q07599 24425043 PDBbind: -logKd/Ki=9.05, IC50=0.9nM
    25899 4m3q:A (2.718) BS02 24K 2.7.10.1 GO:0004672 ... Q12866 24195762 PDBbind: -logKd/Ki=7.77, IC50=17nM
    BindingDB: IC50=55nM
    25900 4m3q:B (2.718) BS01 24K 2.7.10.1 GO:0004672 ... Q12866 24195762 BindingDB: IC50=55nM
    25901 4m48:A (2.955) BS03 21B ? GO:0016020 ... Q7K4Y6 24037379 PDBbind: -logKd/Ki=6.81, Ki=156nM
    25902 4m49:A (2.052) BS02 22Y 1.1.1.27 GO:0003824 ... P00338 24012183 MOAD: Kd=5uM
    BindingDB: IC50=2000nM, Kd=5000nM
    25903 4m49:C (2.052) BS02 22Y 1.1.1.27 GO:0003824 ... P00338 24012183 MOAD: Kd=5uM
    BindingDB: IC50=2000nM, Kd=5000nM
    25904 4m49:D (2.052) BS02 22Y 1.1.1.27 GO:0003824 ... P00338 24012183 MOAD: Kd=5uM
    BindingDB: IC50=2000nM, Kd=5000nM
    25905 4m4q:A (2.502) BS03 21A N/A GO:0003723 ... N/A 23978130 MOAD: ic50=0.011uM
    PDBbind: -logKd/Ki=7.96, IC50=11nM
    25906 4m52:A (2.4) BS02 M52 1.8.1.4 GO:0004148 ... P9WHH9 24251446 MOAD: Ki=140nM
    BindingDB: IC50=960nM
    25907 4m52:A (2.4) BS03 M52 1.8.1.4 GO:0004148 ... P9WHH9 24251446 MOAD: Ki=140nM
    BindingDB: IC50=960nM
    25908 4m52:B (2.4) BS02 M52 1.8.1.4 GO:0004148 ... P9WHH9 24251446 MOAD: Ki=140nM
    BindingDB: IC50=960nM
    25909 4m52:B (2.4) BS03 M52 1.8.1.4 GO:0004148 ... P9WHH9 24251446 MOAD: Ki=140nM
    BindingDB: IC50=960nM
    25910 4m52:C (2.4) BS01 M52 1.8.1.4 GO:0004148 ... P9WHH9 24251446 MOAD: Ki=140nM
    BindingDB: IC50=960nM
    25911 4m52:C (2.4) BS03 M52 1.8.1.4 GO:0004148 ... P9WHH9 24251446 MOAD: Ki=140nM
    BindingDB: IC50=960nM
    25912 4m52:D (2.4) BS01 M52 1.8.1.4 GO:0004148 ... P9WHH9 24251446 MOAD: Ki=140nM
    BindingDB: IC50=960nM
    25913 4m52:D (2.4) BS03 M52 1.8.1.4 GO:0004148 ... P9WHH9 24251446 MOAD: Ki=140nM
    BindingDB: IC50=960nM
    25914 4m59:A (2.46) BS01 rna ? GO:0003723 ... B8Y6I0 24162847 PDBbind: Kd=102nM
    25915 4m59:A (2.46) BS02 rna ? GO:0003723 ... B8Y6I0 24162847 PDBbind: Kd=102nM
    25916 4m59:B (2.46) BS01 rna ? GO:0003723 ... B8Y6I0 24162847 PDBbind: Kd=102nM
    25917 4m59:B (2.46) BS02 rna ? GO:0003723 ... B8Y6I0 24162847 PDBbind: Kd=102nM
    25918 4m5g:A (1.31) BS02 YH1 2.7.6.3 GO:0000287 ... P26281 24613625 MOAD: Kd=9.7uM
    PDBbind: -logKd/Ki=5.01, Kd=9.7uM
    25919 4m5h:A (1.11) BS02 YH2 2.7.6.3 GO:0000287 ... P26281 24613625 MOAD: Kd=29uM
    PDBbind: -logKd/Ki=4.54, Kd=29uM
    25920 4m5i:A (1.08) BS05 YH6 2.7.6.3 GO:0000287 ... P26281 24613625 MOAD: Kd=6.7uM
    PDBbind: -logKd/Ki=5.17, Kd=6.7uM
    BindingDB: IC50=64000nM, Kd=6700nM
    25921 4m5j:A (1.696) BS02 YH5 2.7.6.3 GO:0000287 ... P26281 24613625 MOAD: Kd=14.5uM
    PDBbind: -logKd/Ki=4.84, Kd=14.5uM
    BindingDB: IC50=44000nM, Kd=14500nM
    25922 4m5k:A (1.296) BS05 YH3 2.7.6.3 GO:0000287 ... P26281 24613625 MOAD: Kd=5.9uM
    PDBbind: -logKd/Ki=5.23, Kd=5.9uM
    25923 4m5l:A (1.094) BS05 YH4 2.7.6.3 GO:0000287 ... P26281 24613625 MOAD: Kd=18.9uM
    PDBbind: -logKd/Ki=4.72, Kd=18.9uM
    BindingDB: Kd=18900nM, IC50=243000nM
    25924 4m5m:A (1.118) BS01 DX4 2.7.6.3 GO:0000287 ... P26281 24613625 MOAD: Kd=18uM
    PDBbind: -logKd/Ki=4.74, Kd=18uM
    25925 4m5n:A (2.0) BS04 YH7 2.7.6.3 GO:0000287 ... P26281 24613625 MOAD: Kd=7.5uM
    PDBbind: -logKd/Ki=5.12, Kd=7.5uM
    25926 4m5n:B (2.0) BS04 YH7 2.7.6.3 GO:0000287 ... P26281 24613625 MOAD: Kd=7.5uM
    25927 4m5o:A (2.0) BS03 X48 N/A GO:0003723 ... N/A 23978130 MOAD: ic50=0.38uM
    PDBbind: -logKd/Ki=6.42, IC50=0.38uM
    25928 4m5o:A (2.0) BS04 X48 N/A GO:0003723 ... N/A 23978130 MOAD: ic50=0.38uM
    PDBbind: -logKd/Ki=6.42, IC50=0.38uM
    25929 4m5o:A (2.0) BS05 X48 N/A GO:0003723 ... N/A 23978130 MOAD: ic50=0.38uM
    PDBbind: -logKd/Ki=6.42, IC50=0.38uM
    25930 4m5r:A (1.4) BS02 MSR N/A GO:0003723 ... N/A 23978130 MOAD: ic50=1000uM
    PDBbind: -logKd/Ki=3.00, IC50=1000uM
    25931 4m5r:A (1.4) BS03 MSR N/A GO:0003723 ... N/A 23978130 MOAD: ic50=1000uM
    PDBbind: -logKd/Ki=3.00, IC50=1000uM
    25932 4m5u:A (2.2) BS03 20F N/A GO:0003723 ... N/A 24055080 MOAD: ic50=0.023uM
    PDBbind: -logKd/Ki=7.96, IC50=11nM
    25933 4m6p:A (1.75) BS01 20R 2.4.2.12 GO:0005125 ... P43490 24021463 MOAD: ic50=0.054uM
    PDBbind: -logKd/Ki=7.27, IC50=54nM
    25934 4m6p:A (1.75) BS02 20R 2.4.2.12 GO:0005125 ... P43490 24021463 MOAD: ic50=0.054uM
    PDBbind: -logKd/Ki=7.27, IC50=54nM
    25935 4m6p:B (1.75) BS01 20R 2.4.2.12 GO:0005125 ... P43490 24021463 MOAD: ic50=0.054uM
    PDBbind: -logKd/Ki=7.27, IC50=54nM
    25936 4m6q:A (2.406) BS01 20T 2.4.2.12 GO:0005125 ... P43490 24021463 MOAD: ic50=0.0061uM
    PDBbind: -logKd/Ki=8.21, IC50=6.1nM
    25937 4m6q:A (2.406) BS03 20T 2.4.2.12 GO:0005125 ... P43490 24021463 MOAD: ic50=0.0061uM
    PDBbind: -logKd/Ki=8.21, IC50=6.1nM
    25938 4m6q:B (2.406) BS01 20T 2.4.2.12 GO:0005125 ... P43490 24021463 MOAD: ic50=0.0061uM
    PDBbind: -logKd/Ki=8.21, IC50=6.1nM
    25939 4m6q:B (2.406) BS02 20T 2.4.2.12 GO:0005125 ... P43490 24021463 MOAD: ic50=0.0061uM
    PDBbind: -logKd/Ki=8.21, IC50=6.1nM
    25940 4m6u:A (1.8) BS02 TTN 5.1.2.2 GO:0000287 ... P11444 24472022 PDBbind: -logKd/Ki=2.74, Ki=1.8mM
    25941 4m6u:B (1.8) BS02 TTN 5.1.2.2 GO:0000287 ... P11444 24472022 PDBbind: -logKd/Ki=2.74, Ki=1.8mM
    25942 4m7b:A (1.95) BS02 28C 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24527792 MOAD: ic50=200nM
    PDBbind: -logKd/Ki=6.70, IC50=0.2uM
    BindingDB: IC50=200nM
    25943 4m7b:C (1.95) BS02 28C 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24527792 MOAD: ic50=200nM
    BindingDB: IC50=200nM
    25944 4m7j:H (1.95) BS01 KDA N/A N/A N/A 24682362 PDBbind: -logKd/Ki=6.11, Kd=0.781uM
    25945 4m7v:A (2.3) BS01 RAR 1.5.1.3 GO:0000166 ... Q834R2 24495113 MOAD: Ki=4.5nM
    25946 4m7x:A (1.42) BS02 27Q 2.7.1.33 GO:0004594 ... Q8NVG0 27759386 PDBbind: -logKd/Ki=4.80, IC50=15.7uM
    25947 4m7y:A (1.8) BS01 2GH 2.7.1.33 GO:0004594 ... Q8NVG0 27759386 PDBbind: -logKd/Ki=5.32, IC50=4.8uM
    25948 4m7y:A (1.8) BS03 2GH 2.7.1.33 GO:0004594 ... Q8NVG0 27759386 PDBbind: -logKd/Ki=5.32, IC50=4.8uM
    25949 4m7y:B (1.8) BS01 2GH 2.7.1.33 GO:0004594 ... Q8NVG0 27759386 PDBbind: -logKd/Ki=5.32, IC50=4.8uM
    25950 4m7y:B (1.8) BS02 2GH 2.7.1.33 GO:0004594 ... Q8NVG0 27759386 PDBbind: -logKd/Ki=5.32, IC50=4.8uM
    25951 4m84:A (1.998) BS01 21E 2.7.11.17 GO:0004672 ... Q9BJF5 24494061 MOAD: ic50=0.049uM
    PDBbind: -logKd/Ki=7.31, IC50=49nM
    BindingDB: IC50=49.0nM
    25952 4m8b:R (2.61) BS01 dna ? N/A P38867 24994900 PDBbind: Kd=2.2uM
    25953 4m8b:R (2.61) BS02 dna ? N/A P38867 24994900 PDBbind: Kd=2.2uM
    25954 4m8d:A (1.9) BS02 23J 3.5.2.20 GO:0004061 ... A0NLY7 24917679 MOAD: ic50~10uM
    25955 4m8d:B (1.9) BS01 23J 3.5.2.20 GO:0004061 ... A0NLY7 24917679 MOAD: ic50~10uM
    25956 4m8d:B (1.9) BS03 23J 3.5.2.20 GO:0004061 ... A0NLY7 24917679 MOAD: ic50~10uM
    25957 4m8d:C (1.9) BS02 23J 3.5.2.20 GO:0004061 ... A0NLY7 24917679 MOAD: ic50~10uM
    25958 4m8d:C (1.9) BS04 23J 3.5.2.20 GO:0004061 ... A0NLY7 24917679 MOAD: ic50~10uM
    25959 4m8d:D (1.9) BS01 23J 3.5.2.20 GO:0004061 ... A0NLY7 24917679 MOAD: ic50~10uM
    25960 4m8d:D (1.9) BS03 23J 3.5.2.20 GO:0004061 ... A0NLY7 24917679 MOAD: ic50~10uM
    25961 4m8d:E (1.9) BS02 23J 3.5.2.20 GO:0004061 ... A0NLY7 24917679 MOAD: ic50~10uM
    25962 4m8d:F (1.9) BS01 23J 3.5.2.20 GO:0004061 ... A0NLY7 24917679 MOAD: ic50~10uM
    25963 4m8d:F (1.9) BS03 23J 3.5.2.20 GO:0004061 ... A0NLY7 24917679 MOAD: ic50~10uM
    25964 4m8d:G (1.9) BS02 23J 3.5.2.20 GO:0004061 ... A0NLY7 24917679 MOAD: ic50~10uM
    25965 4m8d:G (1.9) BS03 23J 3.5.2.20 GO:0004061 ... A0NLY7 24917679 MOAD: ic50~10uM
    25966 4m8d:H (1.9) BS01 23J 3.5.2.20 GO:0004061 ... A0NLY7 24917679 MOAD: ic50~10uM
    25967 4m8d:H (1.9) BS03 23J 3.5.2.20 GO:0004061 ... A0NLY7 24917679 MOAD: ic50~10uM
    25968 4m8d:I (1.9) BS02 23J 3.5.2.20 GO:0004061 ... A0NLY7 24917679 MOAD: ic50~10uM
    25969 4m8d:I (1.9) BS03 23J 3.5.2.20 GO:0004061 ... A0NLY7 24917679 MOAD: ic50~10uM
    25970 4m8d:J (1.9) BS01 23J 3.5.2.20 GO:0004061 ... A0NLY7 24917679 MOAD: ic50~10uM
    25971 4m8d:J (1.9) BS03 23J 3.5.2.20 GO:0004061 ... A0NLY7 24917679 MOAD: ic50~10uM
    25972 4m8d:K (1.9) BS02 23J 3.5.2.20 GO:0004061 ... A0NLY7 24917679 MOAD: ic50~10uM
    25973 4m8d:K (1.9) BS03 23J 3.5.2.20 GO:0004061 ... A0NLY7 24917679 MOAD: ic50~10uM
    25974 4m8d:L (1.9) BS01 23J 3.5.2.20 GO:0004061 ... A0NLY7 24917679 MOAD: ic50~10uM
    25975 4m8d:L (1.9) BS03 23J 3.5.2.20 GO:0004061 ... A0NLY7 24917679 MOAD: ic50~10uM
    25976 4m8e:A (2.4) BS02 29V ? GO:0003677 ... P19793 24359708 MOAD: Kd=13nM
    PDBbind: -logKd/Ki=7.89, Kd=13nM
    25977 4m8h:A (2.2) BS02 R4M ? GO:0003677 ... P19793 24359708 MOAD: Kd=25nM
    PDBbind: -logKd/Ki=7.60, Kd=25nM
    25978 4m8t:A (3.0) BS01 RMM 2.7.11.1 GO:0004672 ... P18654 25344815 PDBbind: -logKd/Ki=6.43, IC50=0.37uM
    25979 4m8x:A (2.05) BS01 KGQ 3.1.26.13 GO:0004190 ... Q90JJ9 24371077 PDBbind: -logKd/Ki=10.20, Ki=0.063nM
    25980 4m8x:A (2.05) BS02 KGQ 3.1.26.13 GO:0004190 ... Q90JJ9 24371077 PDBbind: -logKd/Ki=10.20, Ki=0.063nM
    25981 4m8x:B (2.05) BS01 KGQ 3.1.26.13 GO:0004190 ... Q90JJ9 24371077 MOAD: Ki=0.063nM
    PDBbind: -logKd/Ki=10.20, Ki=0.063nM
    25982 4m8x:B (2.05) BS02 KGQ 3.1.26.13 GO:0004190 ... Q90JJ9 24371077 MOAD: Ki=0.063nM
    PDBbind: -logKd/Ki=10.20, Ki=0.063nM
    25983 4m8y:A (2.22) BS01 KGQ 3.1.26.13 GO:0004190 ... Q90JJ9 24371077 MOAD: Ki=0.11nM
    PDBbind: -logKd/Ki=9.96, Ki=0.11nM
    25984 4m8y:A (2.22) BS02 KGQ 3.1.26.13 GO:0004190 ... Q90JJ9 24371077 MOAD: Ki=0.11nM
    PDBbind: -logKd/Ki=9.96, Ki=0.11nM
    25985 4m8y:B (2.22) BS01 KGQ 3.1.26.13 GO:0004190 ... Q90JJ9 24371077 PDBbind: -logKd/Ki=9.96, Ki=0.11nM
    25986 4m8y:B (2.22) BS02 KGQ 3.1.26.13 GO:0004190 ... Q90JJ9 24371077 PDBbind: -logKd/Ki=9.96, Ki=0.11nM
    25987 4m9e:A (1.851) BS01 dna ? N/A Q60793 24520114 PDBbind: Kd=30nM
    25988 4m9e:A (1.851) BS02 dna ? N/A Q60793 24520114 PDBbind: Kd=30nM
    25989 4m9h:A (2.394) BS04 TTP 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 24133209 BindingDB: IC50=1400nM
    25990 4m9v:C (0.969) BS01 dna ? N/A Q8C6P8 24236546 PDBbind: Kd=7nM
    25991 4m9v:C (0.969) BS02 dna ? N/A Q8C6P8 24236546 PDBbind: Kd=7nM
    25992 4m9v:F (0.969) BS01 dna ? N/A Q8C6P8 24236546 PDBbind: Kd=7nM
    25993 4m9v:F (0.969) BS02 dna ? N/A Q8C6P8 24236546 PDBbind: Kd=7nM
    25994 4ma8:C (2.2) BS01 Z80 ? GO:0016020 ... P04925 24373770 BindingDB: EC50=2000nM
    25995 4man:A (2.07) BS01 1Y1 ? GO:0042981 ... P10415 23291630 PDBbind: -logKd/Ki=11.00, Ki<0.01nM
    BindingDB: Ki=<0.100000nM
    25996 4man:B (2.07) BS01 1Y1 ? GO:0042981 ... P10415 23291630 BindingDB: Ki=<0.100000nM
    25997 4mao:A (2.6) BS01 28D 2.7.11.1 GO:0004672 ... P18654 25153195 PDBbind: -logKd/Ki=7.33, IC50=47nM
    25998 4mb9:A (1.85) BS01 28F N/A GO:0003677 ... N/A 24088190 PDBbind: -logKd/Ki=8.00, IC50=10nM
    25999 4mbc:A (1.75) BS01 28G N/A GO:0003677 ... N/A 24088190 PDBbind: -logKd/Ki=6.40, IC50=400nM
    26000 4mbf:A (1.54) BS03 2AW 3.5.2.6 GO:0008800 ... P0AD64 24454944 PDBbind: -logKd/Ki=5.77, Ki=1.7uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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