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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    23601 4gct:D (2.45) BS01 dna ? GO:0000976 ... Q9KVD2 23754405 PDBbind: Kd=53.4nM
    23602 4gct:D (2.45) BS02 dna ? GO:0000976 ... Q9KVD2 23754405 PDBbind: Kd=53.4nM
    23603 4gd6:A (1.53) BS01 17K 3.5.2.6 GO:0008800 ... P0AD64 23145056 PDBbind: -logKd/Ki=7.38, Ki=0.042uM
    23604 4gd9:A (1.5) BS01 BTN ? GO:0009374 ... P22629 23695241 BindingDB: Kd=1.000000nM
    23605 4gd9:B (1.5) BS01 BTN ? GO:0009374 ... P22629 23695241 BindingDB: Kd=1.000000nM
    23606 4gd9:C (1.5) BS01 BTN ? GO:0009374 ... P22629 23695241 BindingDB: Kd=1.000000nM
    23607 4gd9:D (1.5) BS01 BTN ? GO:0009374 ... P22629 23695241 BindingDB: Kd=1.000000nM
    23608 4gda:A (1.0) BS01 BTN ? GO:0009374 ... P22629 23695241 BindingDB: Kd=1.000000nM
    23609 4gda:B (1.0) BS01 BTN ? GO:0009374 ... P22629 23695241 BindingDB: Kd=1.000000nM
    23610 4gdy:A (2.89) BS01 0X1 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 N/A PDBbind: -logKd/Ki=7.08, IC50=84nM
    23611 4gdy:A (2.89) BS02 0X1 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 N/A PDBbind: -logKd/Ki=7.08, IC50=84nM
    23612 4gdy:B (2.89) BS01 0X1 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 N/A PDBbind: -logKd/Ki=7.08, IC50=84nM
    23613 4gdy:B (2.89) BS02 0X1 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 N/A PDBbind: -logKd/Ki=7.08, IC50=84nM
    23614 4ge1:A (2.15) BS01 TSS ? GO:0005576 ... Q86PT9 23275168 PDBbind: -logKd/Ki=6.43, Kd=370nM
    23615 4ge2:A (1.8) BS01 75A 3.1.3.48 GO:0004725 ... P43378 23075115 MOAD: ic50=0.9uM
    PDBbind: -logKd/Ki=6.05, IC50=0.90uM
    23616 4ge4:A (2.41) BS01 0KE 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.11, Ki=7.7nM
    23617 4ge4:A (2.41) BS02 0KE 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.11, Ki=7.7nM
    23618 4ge4:B (2.41) BS01 0KE 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.11, Ki=7.7nM
    23619 4ge4:B (2.41) BS02 0KE 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.11, Ki=7.7nM
    23620 4ge5:A (2.0) BS01 A89 3.1.3.48 GO:0004725 ... P43378 23075115 MOAD: ic50=0.27uM
    PDBbind: -logKd/Ki=6.57, IC50=0.27uM
    23621 4ge6:A (1.4) BS01 B26 3.1.3.48 GO:0004725 ... P43378 23075115 MOAD: Ki=34nM
    PDBbind: -logKd/Ki=7.47, Ki=34nM
    23622 4ge7:A (2.1) BS01 0K5 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.15, Ki=7.1nM
    23623 4ge7:A (2.1) BS02 0K5 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.15, Ki=7.1nM
    23624 4ge7:B (2.1) BS01 0K5 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.15, Ki=7.1nM
    23625 4ge7:B (2.1) BS02 0K5 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.15, Ki=7.1nM
    23626 4ge9:A (2.43) BS01 0L0 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.80, Ki=1.6nM
    23627 4ge9:A (2.43) BS02 0L0 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.80, Ki=1.6nM
    23628 4ge9:B (2.43) BS01 0L0 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.80, Ki=1.6nM
    23629 4ge9:B (2.43) BS02 0L0 2.6.1.39
    2.6.1.4
    2.6.1.63
    2.6.1.7
    2.6.1.73    		 GO:0005739 ... Q8N5Z0 24900560 PDBbind: -logKd/Ki=8.80, Ki=1.6nM
    23630 4gee:A (1.7) BS01 0WT 5.6.2.2 GO:0003677 ... Q839Z1 23352267 MOAD: Ki<1nM
    PDBbind: -logKd/Ki=9.00, Ki<1nM
    23631 4gfd:A (1.8) BS01 0YB 2.7.4.9 GO:0004798 ... P65248 22908966 MOAD: Ki=330pM
    PDBbind: -logKd/Ki=9.48, Ki=0.33nM
    23632 4gfd:B (1.8) BS01 0YB 2.7.4.9 GO:0004798 ... P65248 22908966 MOAD: Ki=330pM
    23633 4gfg:A (2.35) BS01 0XF 2.7.10.2 GO:0004672 ... P43405 N/A BindingDB: IC50=32nM
    23634 4gfm:A (2.3) BS01 0X2 2.7.10.2 GO:0004672 ... O60674 23867602 MOAD: Ki=0.06uM
    PDBbind: -logKd/Ki=7.22, Ki=0.06uM
    23635 4gfn:A (1.9) BS01 SUY 5.6.2.2 GO:0003677 ... Q839Z1 23352267 MOAD: Ki=5nM
    PDBbind: -logKd/Ki=8.30, Ki=5nM
    23636 4gfo:A (2.3) BS01 0X2 2.7.10.2 GO:0004672 ... P29597 23867602 MOAD: Ki=0.24uM
    PDBbind: -logKd/Ki=6.62, Ki=0.24uM
    23637 4gg5:A (2.423) BS01 0J3 2.7.10.1 GO:0004672 ... P08581 22985853 MOAD: ic50=0.93nM
    PDBbind: -logKd/Ki=9.03, IC50=0.93nM
    BindingDB: IC50=0.930000nM
    23638 4gg7:A (2.27) BS01 0J8 2.7.10.1 GO:0004672 ... P08581 22985853 MOAD: ic50=6.5nM
    PDBbind: -logKd/Ki=8.20, Ki=6.3nM
    BindingDB: IC50=6.5nM
    23639 4ggl:A (1.69) BS01 CJC 5.6.2.2 GO:0003677 ... Q839Z1 23352267 MOAD: Ki<1nM
    PDBbind: -logKd/Ki=9.00, Ki<1nM
    23640 4ggz:A (1.75) BS01 BTN ? GO:0009374 ... Q89U61 23661323 MOAD: Kd=0.066nM
    PDBbind: -logKd/Ki=10.18, Kd=0.066nM
    23641 4ggz:B (1.75) BS01 BTN ? GO:0009374 ... Q89U61 23661323 MOAD: Kd=0.066nM
    23642 4ggz:C (1.75) BS01 BTN ? GO:0009374 ... Q89U61 23661323 MOAD: Kd=0.066nM
    23643 4ggz:D (1.75) BS01 BTN ? GO:0009374 ... Q89U61 23661323 MOAD: Kd=0.066nM
    23644 4gh6:A (2.7) BS01 LUO 3.1.4.35 GO:0004114 ... O76083 22985069 PDBbind: -logKd/Ki=7.68, IC50=0.021uM
    23645 4gh8:A (1.85) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 23733948 BindingDB: IC50=8.8nM, EC50=1nM
    23646 4gh8:A (1.85) BS02 NDP 1.5.1.3 GO:0004146 ... P0ABQ4 23733948 MOAD: Kd=2.6uM
    23647 4gh8:B (1.85) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 23733948 BindingDB: IC50=8.8nM, EC50=1nM
    23648 4gh8:B (1.85) BS02 NDP 1.5.1.3 GO:0004146 ... P0ABQ4 23733948 MOAD: Kd=2.6uM
    23649 4gha:A (2.5) BS01 rna ? N/A P35259 23028316 PDBbind: Kd=0.5uM
    23650 4gha:A (2.5) BS02 rna ? N/A P35259 23028316 PDBbind: Kd=0.5uM
    23651 4gha:C (2.5) BS01 rna ? N/A P35259 23028316 PDBbind: Kd=0.5uM
    23652 4gha:E (2.5) BS01 rna ? N/A P35259 23028316 PDBbind: Kd=0.5uM
    23653 4gha:E (2.5) BS02 rna ? N/A P35259 23028316 PDBbind: Kd=0.5uM
    23654 4gha:G (2.5) BS01 rna ? N/A P35259 23028316 PDBbind: Kd=0.5uM
    23655 4gha:G (2.5) BS02 rna ? N/A P35259 23028316 PDBbind: Kd=0.5uM
    23656 4ghi:A (1.5) BS01 0X3 ? N/A Q99814 23434853 MOAD: Kd=81nM
    PDBbind: -logKd/Ki=7.09, Kd=81nM
    BindingDB: Kd=90nM, IC50=490nM
    23657 4ghl:D (2.02) BS01 rna ? N/A Q03039 23185024 PDBbind: Kd=6.6uM
    23658 4ghl:D (2.02) BS02 rna ? N/A Q03039 23185024 PDBbind: Kd=6.6uM
    23659 4ght:A (1.96) BS01 AG7 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15    		 GO:0004197 ... A9XG43 23633597 PDBbind: -logKd/Ki=5.78, IC50=1.67uM
    23660 4gid:A (2.0) BS01 0GH 3.4.23.46 GO:0004190 ... P56817 22954357 MOAD: Ki=0.017nM
    PDBbind: -logKd/Ki=10.77, Ki=0.017nM
    23661 4gid:B (2.0) BS01 0GH 3.4.23.46 GO:0004190 ... P56817 22954357 MOAD: Ki=0.017nM
    23662 4gid:C (2.0) BS01 0GH 3.4.23.46 GO:0004190 ... P56817 22954357 MOAD: Ki=0.017nM
    23663 4gid:D (2.0) BS01 0GH 3.4.23.46 GO:0004190 ... P56817 22954357 MOAD: Ki=0.017nM
    23664 4gih:A (2.0) BS01 0X5 2.7.10.2 GO:0004672 ... P29597 23867602 MOAD: Ki=0.0048uM
    PDBbind: -logKd/Ki=8.32, Ki=0.0048uM
    BindingDB: Ki=4.8nM
    23665 4gii:A (2.31) BS01 0X6 2.7.10.2 GO:0004672 ... P29597 23668484 MOAD: Ki=1.8nM
    PDBbind: -logKd/Ki=8.74, Ki=1.8nM
    23666 4giu:A (1.667) BS04 636 2.4.2.18 GO:0000162 ... P9WFX5 24623674 MOAD: Ki=4.7uM
    PDBbind: -logKd/Ki=5.33, Ki=4.7uM
    23667 4giu:B (1.667) BS04 636 2.4.2.18 GO:0000162 ... P9WFX5 24623674 MOAD: Ki=4.7uM
    23668 4gj2:A (2.4) BS01 0XH 2.7.10.2 GO:0004672 ... P29597 23668484 MOAD: Ki=2.5nM
    PDBbind: -logKd/Ki=8.60, Ki=2.5nM
    23669 4gj3:A (2.5) BS01 0XP 2.7.10.2 GO:0004672 ... P29597 23668484 MOAD: Ki=1.4nM
    PDBbind: -logKd/Ki=8.85, Ki=1.4nM
    23670 4gj6:A (2.58) BS01 0LS 3.4.23.15 GO:0004190 ... P00797 23425156 PDBbind: -logKd/Ki=5.12, IC50=7.6uM
    BindingDB: IC50=14000nM
    23671 4gj6:A (2.58) BS02 0LS 3.4.23.15 GO:0004190 ... P00797 23425156 PDBbind: -logKd/Ki=5.12, IC50=7.6uM
    BindingDB: IC50=14000nM
    23672 4gj6:A (2.58) BS03 0LS 3.4.23.15 GO:0004190 ... P00797 23425156 PDBbind: -logKd/Ki=5.12, IC50=7.6uM
    BindingDB: IC50=14000nM
    23673 4gj6:B (2.58) BS01 0LS 3.4.23.15 GO:0004190 ... P00797 23425156 BindingDB: IC50=14000nM
    23674 4gj6:B (2.58) BS02 0LS 3.4.23.15 GO:0004190 ... P00797 23425156 BindingDB: IC50=14000nM
    23675 4gj6:B (2.58) BS03 0LS 3.4.23.15 GO:0004190 ... P00797 23425156 BindingDB: IC50=14000nM
    23676 4gj7:A (2.8) BS01 0LT 3.4.23.15 GO:0004190 ... P00797 23425156 PDBbind: -logKd/Ki=6.77, IC50=0.17uM
    BindingDB: IC50=170nM
    23677 4gj7:B (2.8) BS01 0LT 3.4.23.15 GO:0004190 ... P00797 23425156 BindingDB: IC50=170nM
    23678 4gj8:A (2.5) BS01 0LU 3.4.23.15 GO:0004190 ... P00797 23360239 PDBbind: -logKd/Ki=3.30, Kd>500uM
    BindingDB: Kd=>500000nM
    23679 4gj8:A (2.5) BS02 0LU 3.4.23.15 GO:0004190 ... P00797 23360239 PDBbind: -logKd/Ki=3.30, Kd>500uM
    BindingDB: Kd=>500000nM
    23680 4gj9:A (2.6) BS01 0M2 3.4.23.15 GO:0004190 ... P00797 23360239 PDBbind: -logKd/Ki=3.30, Kd>500uM
    23681 4gja:A (2.6) BS01 0M3 3.4.23.15 GO:0004190 ... P00797 23360239 PDBbind: -logKd/Ki=5.92, IC50=1.2uM
    BindingDB: IC50=500nM
    23682 4gja:B (2.6) BS01 0M3 3.4.23.15 GO:0004190 ... P00797 23360239 BindingDB: IC50=500nM
    23683 4gjb:A (2.75) BS01 0ME 3.4.23.15 GO:0004190 ... P00797 23360239 PDBbind: -logKd/Ki=4.00, IC50>100uM
    23684 4gjc:A (2.4) BS01 0MJ 3.4.23.15 GO:0004190 ... P00797 23360239 MOAD: ic50=0.09uM
    PDBbind: -logKd/Ki=7.05, IC50=0.09uM
    BindingDB: IC50=90nM
    23685 4gjc:B (2.4) BS01 0MJ 3.4.23.15 GO:0004190 ... P00797 23360239 MOAD: ic50=0.09uM
    BindingDB: IC50=90nM
    23686 4gjd:A (2.65) BS01 0N0 3.4.23.15 GO:0004190 ... P00797 23360239 PDBbind: -logKd/Ki=8.52, IC50=0.003uM
    BindingDB: IC50=3.0nM
    23687 4gjd:B (2.65) BS01 0N0 3.4.23.15 GO:0004190 ... P00797 23360239 BindingDB: IC50=3.0nM
    23688 4gk2:A (2.195) BS01 L66 2.7.10.1 GO:0004672 ... P29320 23253074 PDBbind: -logKd/Ki=8.80, IC50=1.6nM
    BindingDB: IC50=40nM
    23689 4gk3:A (1.898) BS01 L87 2.7.10.1 GO:0004672 ... P29320 23253074 PDBbind: -logKd/Ki=7.25, IC50=56nM
    23690 4gk4:A (2.1) BS01 L90 2.7.10.1 GO:0004672 ... P29320 23253074 PDBbind: -logKd/Ki=7.85, IC50=14nM
    23691 4gkc:A (1.3) BS01 RET ? GO:0005501 ... P50120 23224553 PDBbind: -logKd/Ki=6.82, Kd=150nM
    23692 4gkh:A (1.863) BS02 0J9 N/A GO:0005524 ... N/A 23758273 PDBbind: -logKd/Ki=4.67, Ki=21.5uM
    23693 4gki:A (1.88) BS02 0JN N/A GO:0005524 ... N/A 23758273 PDBbind: -logKd/Ki=4.46, Ki=34.4uM
    23694 4gkm:A (1.6683) BS04 683 2.4.2.18 GO:0000162 ... P9WFX5 24623674 MOAD: Ki=6.8uM
    PDBbind: -logKd/Ki=5.17, Ki=6.8uM
    23695 4gkm:B (1.6683) BS04 683 2.4.2.18 GO:0000162 ... P9WFX5 24623674 MOAD: Ki=6.8uM
    23696 4gl5:A (3.48) BS02 G29 1.14.14.14 GO:0002677 ... P11511 22951074 BindingDB: IC50=112.3nM
    23697 4gl7:A (3.9) BS02 0XJ 1.14.14.14 GO:0002677 ... P11511 22951074 BindingDB: IC50=11.8nM
    23698 4glw:A (2.0) BS01 0XT 6.5.1.2 GO:0003911 ... C1CKI0 23006603 MOAD: Kd=0.8uM
    PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    23699 4glw:B (2.0) BS01 0XT 6.5.1.2 GO:0003911 ... C1CKI0 23006603 MOAD: Kd=0.8uM
    23700 4glx:A (1.9) BS05 0XS 6.5.1.2 GO:0003677 ... P15042 23006603 PDBbind: -logKd/Ki=7.80, Kd=16nM
    23701 4gmc:B (2.7) BS01 1BI 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 N/A PDBbind: -logKd/Ki=7.74, IC50=0.018uM
    23702 4gmy:A (2.403) BS01 0X5 2.7.10.2 GO:0004672 ... O60674 23867602 MOAD: Ki=0.028uM
    PDBbind: -logKd/Ki=7.55, Ki=0.028uM
    BindingDB: Ki=28nM, EC50=1700nM
    23703 4gny:A (1.6367) BS01 SDS ? GO:0005515 ... P02754 23334914 PDBbind: -logKd/Ki=4.22, Kd=60uM
    23704 4gpj:A (1.6) BS01 0Q1 ? N/A O60885 26682033 BindingDB: IC50=1259nM
    23705 4gq0:A (2.1) BS01 QAP 1.1.1.300
    1.1.1.54    		 GO:0001523 ... O60218 N/A BindingDB: IC50=80nM, Ki=46nM
    23706 4gq3:A (1.56) BS01 0RO ? GO:0005634 ... O00255 22936661 BindingDB: Kd=158nM, IC50=446nM
    23707 4gq4:A (1.27) BS01 0RT ? GO:0005634 ... O00255 22936661 PDBbind: -logKd/Ki=7.66, Kd=22nM
    BindingDB: IC50=190nM
    23708 4gqe:A (1.8) BS03 6KJ 1.14.13.39 GO:0004517 ... P29476 23586781 MOAD: Ki=7.4mM
    23709 4gqe:B (1.8) BS05 6KJ 1.14.13.39 GO:0004517 ... P29476 23586781 MOAD: Ki=7.4mM
    23710 4gqi:A (1.948) BS03 M49 1.10.5.1 GO:0001512 ... P16083 23131339 MOAD: ic50=20.7uM
    BindingDB: IC50=20700nM
    23711 4gqi:A (1.948) BS04 M49 1.10.5.1 GO:0001512 ... P16083 23131339 MOAD: ic50=20.7uM
    BindingDB: IC50=20700nM
    23712 4gqi:B (1.948) BS01 M49 1.10.5.1 GO:0001512 ... P16083 23131339 MOAD: ic50=20.7uM
    BindingDB: IC50=20700nM
    23713 4gqi:B (1.948) BS04 M49 1.10.5.1 GO:0001512 ... P16083 23131339 MOAD: ic50=20.7uM
    BindingDB: IC50=20700nM
    23714 4gql:A (1.15) BS06 R47 3.4.24.65 GO:0004222 ... P39900 23343195 MOAD: Ki=0.26nM
    PDBbind: -logKd/Ki=9.59, Ki=0.26nM
    BindingDB: Ki=0.260000nM
    23715 4gqp:H (2.0) BS01 B40 N/A N/A N/A 24419156 MOAD: Kd=0.79nM
    PDBbind: -logKd/Ki=9.60, Kd=0.25nM
    23716 4gqq:A (1.35) BS01 0XR 3.2.1.1 GO:0003824 ... P04746 23050660 PDBbind: -logKd/Ki=2.89, Ki=1.3mM
    23717 4gqq:A (1.35) BS02 0XR 3.2.1.1 GO:0003824 ... P04746 23050660 PDBbind: -logKd/Ki=2.89, Ki=1.3mM
    23718 4gqq:A (1.35) BS03 0XR 3.2.1.1 GO:0003824 ... P04746 23050660 PDBbind: -logKd/Ki=2.89, Ki=1.3mM
    23719 4gqr:A (1.2) BS02 MYC 3.2.1.1 GO:0003824 ... P04746 23050660 MOAD: Ki=110uM
    PDBbind: -logKd/Ki=3.96, Ki=110uM
    23720 4gr0:A (1.497) BS06 R4B 3.4.24.65 GO:0004222 ... P39900 23343195 MOAD: Ki=0.28nM
    PDBbind: -logKd/Ki=9.55, Ki=0.28nM
    BindingDB: Ki=0.280000nM
    23721 4gr3:A (1.494) BS06 R45 3.4.24.65 GO:0004222 ... P39900 23343195 MOAD: Ki=15.5nM
    PDBbind: -logKd/Ki=7.81, Ki=15.5nM
    BindingDB: Ki=16nM
    23722 4gr8:A (1.299) BS06 R4C 3.4.24.65 GO:0004222 ... P39900 23343195 MOAD: Ki=14.7nM
    PDBbind: -logKd/Ki=7.83, Ki=14.7nM
    BindingDB: Ki=15nM
    23723 4gr9:A (2.291) BS03 372 1.10.5.1 GO:0001512 ... P16083 23131339 MOAD: ic50=7uM
    BindingDB: IC50=7000nM
    23724 4gr9:A (2.291) BS04 372 1.10.5.1 GO:0001512 ... P16083 23131339 MOAD: ic50=7uM
    BindingDB: IC50=7000nM
    23725 4gr9:B (2.291) BS01 372 1.10.5.1 GO:0001512 ... P16083 23131339 MOAD: ic50=7uM
    BindingDB: IC50=7000nM
    23726 4gr9:B (2.291) BS04 372 1.10.5.1 GO:0001512 ... P16083 23131339 MOAD: ic50=7uM
    BindingDB: IC50=7000nM
    23727 4grb:A (2.15) BS01 0XG 2.7.11.1 GO:0004672 ... P68400 24900749 MOAD: ic50=17nM
    BindingDB: IC50=100nM
    23728 4gs6:A (2.2) BS01 1FM 2.7.11.25 GO:0000287 ... O43318
    Q15750    		 23272696 PDBbind: -logKd/Ki=7.15, Ki=0.071uM
    23729 4gs8:A (2.99) BS01 MGJ 3.4.24.56 GO:0001618 ... P14735 24735644 PDBbind: -logKd/Ki=7.00, IC50=0.1uM
    BindingDB: IC50=100nM, EC50=530nM
    23730 4gs8:B (2.99) BS01 MGJ 3.4.24.56 GO:0001618 ... P14735 24735644 BindingDB: IC50=100nM, EC50=530nM
    23731 4gs9:A (1.72) BS01 0XB ? N/A Q99814 23363003 MOAD: Kd=2.2uM
    BindingDB: Kd=2200nM
    23732 4gsc:A (2.81) BS02 MGW 3.4.24.56 GO:0001618 ... P14735 24735644 PDBbind: -logKd/Ki=5.85, IC50=1.4uM
    23733 4gsy:A (1.71) BS01 0Y5 2.7.4.9 GO:0004798 ... Q6GJI9 23043329 MOAD: ic50=120nM
    PDBbind: -logKd/Ki=6.92, IC50=120nM
    23734 4gsy:B (1.71) BS01 0Y5 2.7.4.9 GO:0004798 ... Q6GJI9 23043329 MOAD: ic50=120nM
    23735 4gtm:B (2.2) BS03 7TM 2.5.1.58 GO:0003824 ... Q02293 22963166 MOAD: ic50=9.2nM
    PDBbind: -logKd/Ki=8.04, IC50=9.2nM
    23736 4gto:B (2.15) BS02 7TO 2.5.1.58 GO:0003824 ... Q02293 22963166 MOAD: ic50=10.5nM
    PDBbind: -logKd/Ki=7.98, IC50=10.5nM
    23737 4gtp:B (2.75) BS03 7TP 2.5.1.58 GO:0003824 ... Q02293 22963166 PDBbind: -logKd/Ki=7.94, IC50=11.4nM
    23738 4gtq:B (2.6) BS03 7TQ 2.5.1.58 GO:0003824 ... Q02293 22963166 PDBbind: -logKd/Ki=8.30, IC50<5nM
    23739 4gtr:B (2.2) BS02 7TR 2.5.1.58 GO:0003824 ... Q02293 22963166 PDBbind: -logKd/Ki=8.30, IC50<5nM
    23740 4gts:B (2.45) BS03 7TP 2.5.1.60 GO:0003824 ... Q08603 22963166 MOAD: ic50=12.8nM
    PDBbind: -logKd/Ki=7.89, IC50=12.8nM
    23741 4gtt:B (2.05) BS03 7TQ 2.5.1.60 GO:0003824 ... Q08603 22963166 MOAD: ic50=6nM
    PDBbind: -logKd/Ki=8.22, IC50=6nM
    23742 4gtv:B (1.95) BS03 7TR 2.5.1.60 GO:0003824 ... Q08603 22963166 MOAD: ic50=38nM
    PDBbind: -logKd/Ki=7.42, IC50=38nM
    23743 4gu6:A (1.95) BS01 10N 2.7.10.2 GO:0004672 ... Q05397 23294348 MOAD: Kd=44nM
    PDBbind: -logKd/Ki=7.36, Kd=44nM
    BindingDB: IC50=195nM, Kd=44nM
    23744 4gu6:B (1.95) BS01 10N 2.7.10.2 GO:0004672 ... Q05397 23294348 MOAD: Kd=44nM
    BindingDB: IC50=195nM, Kd=44nM
    23745 4gu9:A (2.4) BS01 4GU 2.7.10.2 GO:0004672 ... Q05397 23294348 MOAD: Kd=43uM
    PDBbind: -logKd/Ki=4.37, Kd=43uM
    23746 4gu9:B (2.4) BS01 4GU 2.7.10.2 GO:0004672 ... Q05397 23294348 MOAD: Kd=43uM
    23747 4gue:A (1.8) BS01 QCT 2.7.11.1 GO:0004672 ... P18654 23385462 MOAD: Kd=5.8uM
    PDBbind: -logKd/Ki=5.24, Kd=5.8uM
    23748 4gui:A (1.78) BS01 QIC 4.2.1.10 GO:0003855 ... P58687 24437575 PDBbind: -logKd/Ki=3.64, Kd=0.23mM
    23749 4guj:A (1.5) BS01 SKM 4.2.1.10 GO:0003855 ... P58687 24437575 PDBbind: -logKd/Ki=3.05, Kd=0.9mM
    23750 4guq:A (3.7) BS01 dna ? GO:0000976 ... O15350 23892287 PDBbind: Kd=4480nM
    23751 4guq:A (3.7) BS02 dna ? GO:0000976 ... O15350 23892287 PDBbind: Kd=4480nM
    23752 4guq:B (3.7) BS01 dna ? GO:0000976 ... O15350 23892287 PDBbind: Kd=4480nM
    23753 4guy:A (2.0) BS06 KLJ 3.4.24.65 GO:0004222 ... P39900 N/A BindingDB: Ki=10.0nM
    23754 4gv0:A (1.9) BS01 8ME 2.4.2.- GO:0003950 ... Q9Y6F1 23742272 MOAD: ic50=1.3uM
    23755 4gv1:A (1.49) BS01 0XZ 2.7.11.1 GO:0004672 ... P31749 23394218 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=4.2nM
    23756 4gv4:A (1.8) BS01 MEJ 2.4.2.- GO:0003950 ... Q9Y6F1 23742272 MOAD: ic50=0.89uM
    23757 4gv7:A (2.89) BS01 MEW 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P09874 23742272 BindingDB: IC50=5600nM
    23758 4gv7:B (2.89) BS01 MEW 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P09874 23742272 BindingDB: IC50=5600nM
    23759 4gv7:C (2.89) BS01 MEW 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P09874 23742272 BindingDB: IC50=5600nM
    23760 4gv7:D (2.89) BS01 MEW 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P09874 23742272 BindingDB: IC50=5600nM
    23761 4gv8:A (2.1) BS01 DUP 3.6.1.23 GO:0000287 ... Q8SDV3 24311572 MOAD: Kd=0.32uM
    PDBbind: -logKd/Ki=6.49, Kd=0.32uM
    23762 4gv8:A (2.1) BS02 DUP 3.6.1.23 GO:0000287 ... Q8SDV3 24311572 MOAD: Kd=0.32uM
    PDBbind: -logKd/Ki=6.49, Kd=0.32uM
    23763 4gv8:B (2.1) BS01 DUP 3.6.1.23 GO:0000287 ... Q8SDV3 24311572 MOAD: Kd=0.32uM
    PDBbind: -logKd/Ki=6.49, Kd=0.32uM
    23764 4gv8:B (2.1) BS02 DUP 3.6.1.23 GO:0000287 ... Q8SDV3 24311572 MOAD: Kd=0.32uM
    PDBbind: -logKd/Ki=6.49, Kd=0.32uM
    23765 4gv8:C (2.1) BS01 DUP 3.6.1.23 GO:0000287 ... Q8SDV3 24311572 MOAD: Kd=0.32uM
    PDBbind: -logKd/Ki=6.49, Kd=0.32uM
    23766 4gv8:C (2.1) BS02 DUP 3.6.1.23 GO:0000287 ... Q8SDV3 24311572 MOAD: Kd=0.32uM
    PDBbind: -logKd/Ki=6.49, Kd=0.32uM
    23767 4gv8:D (2.1) BS01 DUP 3.6.1.23 GO:0000287 ... Q8SDV3 24311572 MOAD: Kd=0.32uM
    23768 4gv8:D (2.1) BS02 DUP 3.6.1.23 GO:0000287 ... Q8SDV3 24311572 MOAD: Kd=0.32uM
    23769 4gv8:E (2.1) BS01 DUP 3.6.1.23 GO:0000287 ... Q8SDV3 24311572 MOAD: Kd=0.32uM
    23770 4gv8:E (2.1) BS02 DUP 3.6.1.23 GO:0000287 ... Q8SDV3 24311572 MOAD: Kd=0.32uM
    23771 4gv8:F (2.1) BS01 DUP 3.6.1.23 GO:0000287 ... Q8SDV3 24311572 MOAD: Kd=0.32uM
    23772 4gv8:F (2.1) BS02 DUP 3.6.1.23 GO:0000287 ... Q8SDV3 24311572 MOAD: Kd=0.32uM
    23773 4gvm:A (2.16) BS01 LF2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23615903 MOAD: ic50=1.49uM
    PDBbind: -logKd/Ki=6.11, IC50=0.78uM
    BindingDB: IC50=1.7e+2nM
    23774 4gw6:A (2.65) BS01 LF2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23615903 PDBbind: -logKd/Ki=6.20, IC50=0.63uM
    BindingDB: IC50=1.7e+2nM
    23775 4gw8:A (2.0) BS02 3RA 2.7.11.1 GO:0004672 ... P11309 22998443 MOAD: ic50=0.88uM
    PDBbind: -logKd/Ki=6.06, IC50=0.88uM
    23776 4gxk:A (1.998) BS06 F2A 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 23267011 BindingDB: Ki=5000nM
    23777 4gxs:B (1.9634) BS01 0YS ? GO:0015276 ... P19491 23076153 PDBbind: -logKd/Ki=4.00, IC50>100uM
    23778 4gxs:D (1.9634) BS01 0YS ? GO:0015276 ... P19491 23076153 PDBbind: -logKd/Ki=4.00, IC50>100uM
    23779 4gyw:A (1.7) BS02 UDP 2.4.1.255 N/A O15294 23103939 BindingDB: IC50=1800nM
    23780 4gyw:C (1.7) BS02 UDP 2.4.1.255 N/A O15294 23103939 BindingDB: IC50=1800nM
    23781 4gz3:A (1.9) BS02 UDP 2.4.1.255 N/A O15294 23103939 PDBbind: -logKd/Ki=5.74, IC50=1.8uM
    BindingDB: IC50=1800nM
    23782 4gz3:C (1.9) BS02 UDP 2.4.1.255 N/A O15294 23103939 BindingDB: IC50=1800nM
    23783 4gzn:C (0.99) BS01 dna ? N/A Q8C6P8 23059534 PDBbind: Kd=8nM
    23784 4gzn:C (0.99) BS02 dna ? N/A Q8C6P8 23059534 PDBbind: Kd=8nM
    23785 4gzp:A (2.3) BS02 G39 3.2.1.18 GO:0004308 ... K7N5N3 23015718 MOAD: Ki=14.3nM
    PDBbind: -logKd/Ki=7.84, Ki=14.3nM
    23786 4gzt:A (2.19) BS02 G39 3.2.1.18 GO:0004308 ... K7N5N3 23015718 MOAD: Ki=17nM
    PDBbind: -logKd/Ki=7.77, Ki=17.0nM
    23787 4gzt:B (2.19) BS02 G39 3.2.1.18 GO:0004308 ... K7N5N3 23015718 MOAD: Ki=17nM
    23788 4gzt:C (2.19) BS02 G39 3.2.1.18 GO:0004308 ... K7N5N3 23015718 MOAD: Ki=17nM
    23789 4gzt:D (2.19) BS03 G39 3.2.1.18 GO:0004308 ... K7N5N3 23015718 MOAD: Ki=17nM
    23790 4gzw:A (2.45) BS01 SIA 3.2.1.18 GO:0004308 ... K7N5N3 23015718 PDBbind: -logKd/Ki=4.52, Kd=30.0uM
    23791 4gzx:A (2.45) BS01 SIA 3.2.1.18 GO:0004308 ... K7N5N3 23015718 PDBbind: -logKd/Ki=3.19, Kd=645uM
    23792 4h10:A (2.402) BS01 dna ? GO:0003700 ... O00327 23229515 PDBbind: Kd=1.52uM
    23793 4h10:A (2.402) BS02 dna ? GO:0003700 ... O00327 23229515 PDBbind: Kd=1.52uM
    23794 4h10:B (2.402) BS01 dna 2.3.1.48 GO:0000981 ... O15516 23229515 PDBbind: Kd=1.52uM
    23795 4h10:B (2.402) BS02 dna 2.3.1.48 GO:0000981 ... O15516 23229515 PDBbind: Kd=1.52uM
    23796 4h1e:A (1.9) BS01 10J 3.4.23.46 GO:0004190 ... P56817 22989333 MOAD: Ki=3nM
    PDBbind: -logKd/Ki=8.52, Ki=3nM
    23797 4h1e:B (1.9) BS01 10J 3.4.23.46 GO:0004190 ... P56817 22989333 MOAD: Ki=3nM
    23798 4h1j:A (2.0) BS01 0YH 2.7.10.2 GO:0004672 ... Q14289 23153798 MOAD: ic50=1200nM
    PDBbind: -logKd/Ki=5.92, IC50=1200nM
    BindingDB: IC50=1200nM
    23799 4h1m:A (1.99) BS01 0YJ 2.7.10.2 GO:0004672 ... Q14289 23153798 MOAD: ic50=78nM
    PDBbind: -logKd/Ki=7.11, IC50=78nM
    BindingDB: IC50=78nM
    23800 4h2e:A (2.902) BS05 0Y3 3.4.24.35 GO:0004222 ... P14780 23567804 BindingDB: IC50=38nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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