Structure of PDB 7y5e Chain zF

Receptor sequence
>7y5ezF (length=462) Species: 35688 (Porphyridium purpureum) [Search protein sequence]
LSSGSSAAVPFSTAVRFESPSGGLDRYSRVDPAAPGPNVITRFLFKDRPV
RRSDPSLSEVDREATMRTVYRNVMGNAYVMEEERAELATLESQFLVGAIS
TRDFVRGVAKSATYKKRFFESVSQFRFIELNFKHFMGRAPLDMAEMSKHY
EIFAAGGYDAEVDSYFDSEEYLDVFGLDTVPYMRFRGTYAPNSTFNLQCR
LQGGWARSDKKLPMMSMLPLNNKAAIMPHQIVDGLPVIPNSEHPSQKYNV
PKVSREKLQRELLIAQGKANALQIELDAAYTSLASSRAFLAPFAAMAADM
DIRPLYGKNPQVFAGQFLGVGAGQWGKTGADTVRGRSRRVAADIGVKEFQ
LERVKQLVVDLQRALALEDAEADAPATSLLQAYQAKVYVKPPVIAKKKGP
EPVNEDEITIGQGDKKIKVTVLRNLGDRTEKLREKPEKEEEEGPRTFKDL
YETAKPMKGFPG
3D structure
PDB7y5e In situ structure of the red algal phycobilisome-PSII-PSI-LHC megacomplex.
ChainzF
Resolution3.3 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide zF V446 T447 V448 R450 V419 T420 V421 R423
BS02 PEB zF S119 V123 S92 V96
BS03 PEB zF Q151 S174 Y177 Q124 S147 Y150
BS04 PEB zF T68 R213 G214 T215 Y216 T41 R186 G187 T188 Y189
BS05 PEB zF R98 N103 A104 Y105 A233 S235 K237 R71 N76 A77 Y78 A206 S208 K210
Gene Ontology
Cellular Component
GO:0009507 chloroplast
GO:0009535 chloroplast thylakoid membrane
GO:0009579 thylakoid
GO:0016020 membrane
GO:0030089 phycobilisome

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:7y5e, PDBe:7y5e, PDBj:7y5e
PDBsum7y5e
PubMed36922595
UniProtA0A5J4YI31

[Back to BioLiP]