Structure of PDB 6ylg Chain z

Receptor sequence
>6ylgz (length=77) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
AKSLRASSHLNAKSVKRRGVFQKAVDAREQRISDKLKEDLLKQKLEDLKK
WRDGRHHTYKKAKLMKQSKKKTSFTRF
3D structure
PDB6ylg Construction of the Central Protuberance and L1 Stalk during 60S Subunit Biogenesis.
Chainz
Resolution3.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna z A2 K3 S4 L5 R6 A7 S8 K17 R18 W80 R81 H85 K89 L93 M94 K98 K100 A1 K2 S3 L4 R5 A6 S7 K16 R17 W51 R52 H56 K60 L64 M65 K69 K71
Gene Ontology
Molecular Function
GO:0003674 molecular_function
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0030687 preribosome, large subunit precursor

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:6ylg, PDBe:6ylg, PDBj:6ylg
PDBsum6ylg
PubMed32668200
UniProtP38202|YBC8_YEAST UPF0642 protein YBL028C (Gene Name=YBL028C)

[Back to BioLiP]