Structure of PDB 6ogg Chain z

Receptor sequence
>6oggz (length=58) Species: 562 (Escherichia coli) [Search protein sequence]
AKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAIRGMINAV
SFMVKVEE
3D structure
PDB6ogg Extensive ribosome and RF2 rearrangements during translation termination.
Chainz
Resolution4.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna z R10 S11 I13 G14 P17 K18 A21 T22 G25 R29 R30 I31 R37 E38 P41 A42 G45 M46 R10 S11 I13 G14 P17 K18 A21 T22 G25 R29 R30 I31 R37 E38 P41 A42 G45 M46
BS02 rna z R15 H19 F52 R15 H19 F52
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:6ogg, PDBe:6ogg, PDBj:6ogg
PDBsum6ogg
PubMed31513010
UniProtP0AG51|RL30_ECOLI Large ribosomal subunit protein uL30 (Gene Name=rpmD)

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