Structure of PDB 3jbu Chain y

Receptor sequence
>3jbuy (length=75) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
RNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRDHTLF
AKADGKVKFEVKGPKNRKFISIEAE
3D structure
PDB3jbu Mechanisms of ribosome stalling by SecM at multiple elongation steps
Chainy
Resolution3.64 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna y G73 P74 G63 P64
BS02 rna y N12 R14 D15 S16 A18 K19 R20 F26 G27 G28 E29 A33 G34 S35 I36 R39 R41 G42 T43 G54 R55 D56 H57 T58 F60 K62 R77 K78 N2 R4 D5 S6 A8 K9 R10 F16 G17 G18 E19 A23 G24 S25 I26 R29 R31 G32 T33 G44 R45 D46 H47 T48 F50 K52 R67 K68
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
GO:0043022 ribosome binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0001558 regulation of cell growth
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0042256 cytosolic ribosome assembly
GO:0090070 positive regulation of ribosome biogenesis
GO:1902626 assembly of large subunit precursor of preribosome
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3jbu, PDBe:3jbu, PDBj:3jbu
PDBsum3jbu
PubMed26670735
UniProtP0A7L8|RL27_ECOLI Large ribosomal subunit protein bL27 (Gene Name=rpmA)

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