Structure of PDB 7pjx Chain x

Receptor sequence
>7pjxx (length=522) Species: 562 (Escherichia coli) [Search protein sequence]
ARTTPIARYRNIGISAHIDAGKTTTTERILFYSAATTAFWSGMAKQYEPH
RINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANK
YKVPRIAFVNKMDRMGANFLKVVNQIKTRLGANPVPLQLAIGAEEHFTGV
VDLVKMKAINWNDADQGVTFEYEDIPADMVELANEWHQNLIESAAEASEE
LMEKYLGGEELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQAMLDAV
IDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSALAFKIATDPFVGN
LTFFRVYSGVVNSGDTVLNSVKAARERFGRIVQMHANKREEIKEVRAGDI
AAAIGLKDVTTGDTLCDPDAPIILERMEFPEPVISIAVEPKTKADQEKMG
LALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDIIVDRMKREFNVEAN
VGKMKVEVETPEENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPLSEM
FGYATQLRSLTKGRASYTMEFL
3D structure
PDB7pjx Structural mechanism of GTPase-powered ribosome-tRNA movement.
Chainx
Resolution6.5 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna x I18 Q119 P120 Q121 G632 S635 R636 Q644 R670 S671 K674 G675 I18 Q88 P89 Q90 G470 S473 R474 Q482 R508 S509 K512 G513
BS02 rna x F328 V329 R358 G360 R361 I385 R436 F297 V298 R327 G329 R330 I354 R405
BS03 GDP x D19 K22 T24 D144 F269 D19 K22 T24 D113 F238
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Mon Dec 2 04:46:57 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '7pjx', asym_id = 'x', title = 'Structural mechanism of GTPase-powered ribosome-tRNA movement.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='7pjx', asym_id='x', title='Structural mechanism of GTPase-powered ribosome-tRNA movement.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0003746,0003924,0005525,0006414', uniprot = '', pdbid = '7pjx', asym_id = 'x'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003746,0003924,0005525,0006414', uniprot='', pdbid='7pjx', asym_id='x')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>