Structure of PDB 9c4g Chain v

Receptor sequence

>9c4gv (length=78) Species: 1747 (Cutibacterium acnes)

ASSSRNGRDSNAQRLGVKRFGGQLVNAGEIIVRQRGTHFHPGDGVGRGGD
DTLFALRDGNVEFGTRRGRRVVNVTPVE

3D structure

• PDB: 9c4g Mechanistic basis for the translation inhibition of Cutibacterium acnes by Clindamycin.
• Chain: v
• Resolution: 2.53 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	v	S9 S10 R11 N12 R14 D15 S16 N17 A18 Q19 R20 L21 K24 R25 F26 G27 Q29 N32 A33 G34 E35 I36 R39 R41 G42 T43 H44 G54 G55 D56 D57 T58 F60 L62 F69 R75	S3 S4 R5 N6 R8 D9 S10 N11 A12 Q13 R14 L15 K18 R19 F20 G21 Q23 N26 A27 G28 E29 I30 R33 R35 G36 T37 H38 G48 G49 D50 D51 T52 F54 L56 F63 R69
BS02	rna	v	T71 R72 R73	T65 R66 R67

External links

• PDB: RCSB:9c4g, PDBe:9c4g, PDBj:9c4g
• PDBsum: 9c4g
• PubMed: 39122144
• UniProt: A0A2B7IGT1