Structure of PDB 8uh4 Chain v

Receptor sequence
>8uh4v (length=213) Species: 10823 (Maize streak virus - [Nigeria]) [Search protein sequence]
AGSKADRPSLQIQTLQHAGTTMITVPSGGVCDLINTYARGSDEGNRHTSE
TLTYKIAIDYHFVADAAACRYSNTGTGVMWLVYDTTPGGQAPTPQTIFAY
PDTLKAWPATWKVSRELCHRFVVKRRWLFNMETDGRIGSDIPPSNASWKP
CKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAPGNGLTFTA
HGQTRLYFKSVGN
3D structure
PDB8uh4 The Two States of MSV Gemini Capsid Assembly
Chainv
Resolution3.72 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna v I42 F190 R235 Y237 I12 F160 R205 Y207
BS02 dna v K34 R145 H149 R155 K4 R115 H119 R125
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005198 structural molecule activity
Biological Process
GO:0046718 symbiont entry into host cell
GO:0075732 viral penetration into host nucleus
Cellular Component
GO:0019028 viral capsid
GO:0039615 T=1 icosahedral viral capsid
GO:0042025 host cell nucleus
GO:0043657 host cell

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8uh4, PDBe:8uh4, PDBj:8uh4
PDBsum8uh4
PubMed
UniProtP06448|CAPSD_MSVN Capsid protein (Gene Name=V1)

[Back to BioLiP]