Structure of PDB 8phj Chain v

Receptor sequence
>8phjv (length=77) Species: 562 (Escherichia coli) [Search protein sequence]
STRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRDHT
LFAKADGKVKFEVKGPKNRKFISIEAE
3D structure
PDB8phj Ribosomal stalk-captured CARF-RelE ribonuclease inhibits translation following CRISPR signaling
Chainv
Resolution3.67 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna v N12 R14 D15 S16 E17 A18 K19 R20 K24 F26 G27 E29 A33 G34 S35 I36 R41 G42 T43 H46 G54 R55 D56 H57 F60 F69 R77 K78 N4 R6 D7 S8 E9 A10 K11 R12 K16 F18 G19 E21 A25 G26 S27 I28 R33 G34 T35 H38 G46 R47 D48 H49 F52 F61 R69 K70
BS02 rna v K72 G73 P74 K64 G65 P66
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
GO:0043022 ribosome binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0001558 regulation of cell growth
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0042256 cytosolic ribosome assembly
GO:0090070 positive regulation of ribosome biogenesis
GO:1902626 assembly of large subunit precursor of preribosome
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:8phj, PDBe:8phj, PDBj:8phj
PDBsum8phj
PubMed38033086
UniProtP0A7L8|RL27_ECOLI Large ribosomal subunit protein bL27 (Gene Name=rpmA)

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