Structure of PDB 8ir3 Chain v

Receptor sequence
>8ir3v (length=206) Species: 9606 (Homo sapiens) [Search protein sequence]
TKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWKH
SRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKRLRGEVGLLFTNRTKEEV
NEWFTKYTEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTAL
KRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQS
GRFQQM
3D structure
PDB8ir3 Visualizing the nucleoplasmic maturation of human pre-60S ribosomal particles.
Chainv
Resolution3.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna v T13 T15 A16 K17 K18 L22 K23 M48 R49 N50 R57 F67 K69 N70 K71 V72 V75 R79 R126 S148 M149 P184 K191 T1 T3 A4 K5 K6 L10 K11 M36 R37 N38 R45 F55 K57 N58 K59 V60 V63 R67 R114 S136 M137 P172 K179
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005515 protein binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0000956 nuclear-transcribed mRNA catabolic process
GO:0006364 rRNA processing
GO:0042254 ribosome biogenesis
GO:0042273 ribosomal large subunit biogenesis
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0030687 preribosome, large subunit precursor

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8ir3, PDBe:8ir3, PDBj:8ir3
PDBsum8ir3
PubMed37491604
UniProtQ9UKD2|MRT4_HUMAN mRNA turnover protein 4 homolog (Gene Name=MRTO4)

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