Structure of PDB 8ir1 Chain v

Receptor sequence
>8ir1v (length=205) Species: 9606 (Homo sapiens) [Search protein sequence]
KTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWKHS
RMFFGKNKVMMVALGRSPSDEYKDNLHQVSKRLRGEVGLLFTNRTKEEVN
EWFTKYTEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALK
RGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSG
RFQQM
3D structure
PDB8ir1 Visualizing the nucleoplasmic maturation of human pre-60S ribosomal particles.
Chainv
Resolution3.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna v T15 A16 K17 K18 L22 K23 Q24 N50 K54 R57 F67 K69 N70 K71 V72 V75 G98 R126 S148 M149 Q152 P184 T2 A3 K4 K5 L9 K10 Q11 N37 K41 R44 F54 K56 N57 K58 V59 V62 G85 R113 S135 M136 Q139 P171
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005515 protein binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0000956 nuclear-transcribed mRNA catabolic process
GO:0006364 rRNA processing
GO:0042254 ribosome biogenesis
GO:0042273 ribosomal large subunit biogenesis
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0030687 preribosome, large subunit precursor

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8ir1, PDBe:8ir1, PDBj:8ir1
PDBsum8ir1
PubMed37491604
UniProtQ9UKD2|MRT4_HUMAN mRNA turnover protein 4 homolog (Gene Name=MRTO4)

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