Structure of PDB 8idy Chain v

Receptor sequence

>8idyv (length=35) Species: 9606 (Homo sapiens)

IELHRKRYGYRLDYHEKKRKKESREAHERSKKAKK

3D structure

• PDB: 8idy Visualizing the nucleoplasmic maturation of human pre-60S ribosomal particles.
• Chain: v
• Resolution: 3.0 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	v	E8 R25 K26 S29 R30 A32 H33 S36 A39 K40 K41	E2 R19 K20 S23 R24 A26 H27 S30 A33 K34 K35

Gene Ontology

Molecular Function

• GO:0003723 RNA binding

Biological Process

• GO:0000460 maturation of 5.8S rRNA
• GO:0000470 maturation of LSU-rRNA
• GO:0006364 rRNA processing
• GO:0042254 ribosome biogenesis

Cellular Component

• GO:0005634 nucleus
• GO:0005730 nucleolus
• GO:0030687 preribosome, large subunit precursor
• GO:1990904 ribonucleoprotein complex

External links

• PDB: RCSB:8idy, PDBe:8idy, PDBj:8idy
• PDBsum: 8idy
• PubMed: 37491604
• UniProt: O95478|NSA2_HUMAN Ribosome biogenesis protein NSA2 homolog (Gene Name=NSA2)