Structure of PDB 8fzg Chain v

Receptor sequence
>8fzgv (length=487) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
SPYLQEVAKRRTFAIISHPDAGKTTITEKVLLFGQRGISITTSVMQFPYH
DCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKGVEDRTRKLMEVT
RLRDTPILTFMNKLDRDIRDPMELLDEVENELKIGCAPITWPIGCGKLFK
GVYHLYKDETYLYQSGKGHTIQEVRIVKGLNNPDLDAAVGEDLAQQLRDE
LELVKGASNEFDKELFLAGEITPVFFGTALGNFGVDHMLDGLVEWAPAPM
PRQTDTRTVEASEDKFTGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMK
LRQVRTAKDVVISDALTFMVEEAYPGDILGLHNHGTIQIGDTFTQGEMMK
FTGIPNFAPELFRRIRLKDPLKQKQLLKGLVQLSEEGAVQVFRPISNNDL
IVGAVGVLQFDVVVARLKSEYNVEAVYESVNVATARWVAKKFEEFKRKNE
SQLALDGGDNLAYIATSMVNLRLAQERYPDVQFHQTR
3D structure
PDB8fzg The ribosome termination complex remodels release factor RF3 and ejects GDP
Chainv
Resolution3.1 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna v H311 R312 Q411 H281 R282 Q375
Gene Ontology
Molecular Function
GO:0003924 GTPase activity
GO:0005515 protein binding
GO:0005525 GTP binding
GO:0016149 translation release factor activity, codon specific
GO:0016150 translation release factor activity, codon nonspecific
GO:0019003 GDP binding
GO:0097216 guanosine tetraphosphate binding
Biological Process
GO:0006412 translation
GO:0006415 translational termination
GO:0006449 regulation of translational termination
GO:1990145 maintenance of translational fidelity
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8fzg, PDBe:8fzg, PDBj:8fzg
PDBsum8fzg
PubMed39030416
UniProtP0A7I4|RF3_ECOLI Peptide chain release factor RF3 (Gene Name=prfC)

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