Structure of PDB 7pic Chain u

Receptor sequence

>7picu (length=86) Species: 272634 (Mycoplasmoides pneumoniae M129)

SKKGVGSTKNGRDSHAKRLGAKKADGQMIRTGQIIYRQRGTRVYPGVNVG
LGSDDTLFALSDGLVKYQKFGPKQGKTRVSVVKHKL

3D structure

• PDB: 7pic Visualizing translation dynamics at atomic detail inside a bacterial cell.
• Chain: u
• Resolution: 9.1 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	u	S17 K18 V21 G22 N26 G27 R28 D29 S30 H31 K33 R34 L35 K38 K39 D41 Q43 R46 T47 G48 Q49 I50 R53 R55 G56 T57 R58 Y60 G68 S69 D70 D71 F74 Y83 K89 K92	S1 K2 V5 G6 N10 G11 R12 D13 S14 H15 K17 R18 L19 K22 K23 D25 Q27 R30 T31 G32 Q33 I34 R37 R39 G40 T41 R42 Y44 G52 S53 D54 D55 F58 Y67 K73 K76
BS02	rna	u	F86 G87 P88	F70 G71 P72

Gene Ontology

Molecular Function

• GO:0003735 structural constituent of ribosome

Biological Process

• GO:0006412 translation

Cellular Component

• GO:0005840 ribosome
• GO:0022625 cytosolic large ribosomal subunit
• GO:1990904 ribonucleoprotein complex

External links

• PDB: RCSB:7pic, PDBe:7pic, PDBj:7pic
• PDBsum: 7pic
• PubMed: 36171285
• UniProt: P75458|RL27_MYCPN Large ribosomal subunit protein bL27 (Gene Name=rpmA)