Structure of PDB 6ogi Chain u

Receptor sequence
>6ogiu (length=102) Species: 562 (Escherichia coli) [Search protein sequence]
AAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKKHQKPVPA
LNQPGGIVEKEAAIQVSNVAIFNAATGKADRVGFRFEDGKKVRFFKSNSE
TI
3D structure
PDB6ogi Extensive ribosome and RF2 rearrangements during translation termination.
Chainu
Resolution3.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna u A1 K3 R5 R6 T14 G15 K16 V27 K42 K43 H44 P47 G56 Q65 S67 N68 R81 G83 F84 K91 K96 A1 K3 R5 R6 T14 G15 K16 V27 K42 K43 H44 P47 G56 Q65 S67 N68 R81 G83 F84 K91 K96
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:6ogi, PDBe:6ogi, PDBj:6ogi
PDBsum6ogi
PubMed31513010
UniProtP60624|RL24_ECOLI Large ribosomal subunit protein uL24 (Gene Name=rplX)

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