Structure of PDB 8etg Chain t

Receptor sequence
>8etgt (length=235) Species: 4896 (Schizosaccharomyces pombe) [Search protein sequence]
PEVLLKKRKVNERTRKERVEQAIAKKEAQKKNRKETFKRAETFINNYRQR
ERERIRLNRSAKNKGDIFVPDETKLLFVIRIAGVKNMPPKIRKVLRLLRL
SRINNAVFVRNNKAVAQMLRIVEPYVMYGIPNLHSVRELIYKRGFGKING
QRIALSDNALIEEALGKYDVISIEDIIHEIYNVGSHFKEVTKFLWPFTLT
PVKHSLMEKKVKHFNEGRKAGYCGEEINELIKKQV
3D structure
PDB8etg Chromatin localization of nucleophosmin organizes ribosome biogenesis.
Chaint
Resolution3.4 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna t R29 K224 R15 K210
BS02 rna t F51 R53 F37 R39
BS03 rna t E55 N59 Y61 Q63 R68 I69 R73 E137 K226 H227 E41 N45 Y47 Q49 R54 I55 R59 E123 K212 H213
Gene Ontology
Molecular Function
GO:0003674 molecular_function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:1902626 assembly of large subunit precursor of preribosome
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:0030687 preribosome, large subunit precursor
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8etg, PDBe:8etg, PDBj:8etg
PDBsum8etg
PubMed36423630
UniProtP17937|RL7A_SCHPO Large ribosomal subunit protein uL30A (Gene Name=rlp7)

[Back to BioLiP]