Structure of PDB 3jcd Chain t

Receptor sequence
>3jcdt (length=85) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
NIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFN
EMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA
3D structure
PDB3jcd EF4 disengages the peptidyl-tRNA CCA end and facilitates back-translocation on the 70S ribosome
Chaint
Resolution3.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna t N3 I4 K5 K9 R10 Q13 K16 N21 S23 R25 S26 M27 R29 T30 K33 K34 Q55 R60 K64 H68 N70 R74 H75 K76 A77 Q82 N1 I2 K3 K7 R8 Q11 K14 N19 S21 R23 S24 M25 R27 T28 K31 K32 Q53 R58 K62 H66 N68 R72 H73 K74 A75 Q80
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0008073 ornithine decarboxylase inhibitor activity
GO:0019843 rRNA binding
GO:0070181 small ribosomal subunit rRNA binding
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:3jcd, PDBe:3jcd, PDBj:3jcd
PDBsum3jcd
PubMed26809121
UniProtP0A7U7|RS20_ECOLI Small ribosomal subunit protein bS20 (Gene Name=rpsT)

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