Structure of PDB 8ury Chain s

Receptor sequence

>8urys (length=142) Species: 562 (Escherichia coli) [Search protein sequence]

MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDT
GDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERV
IEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI

3D structure

PDB

8ury Structural basis of RfaH-mediated transcription-translation coupling

Chain

Resolution

3.1 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	s	K2 T3 K7 E9 T24 G26 R27 T30 R37 K39 H47 T65 K68 K72 Y75 H76 H77 T78 H80 I81 I84 K85 R95 R99 A104 K106 G107 M108 K111 P113 L114 R116 R120 N131 H132 A134 Q135	K2 T3 K7 E9 T24 G26 R27 T30 R37 K39 H47 T65 K68 K72 Y75 H76 H77 T78 H80 I81 I84 K85 R95 R99 A104 K106 G107 M108 K111 P113 L114 R116 R120 N131 H132 A134 Q135

Gene Ontology

	Molecular Function
GO:0003729	mRNA binding
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0006412	translation
GO:0017148	negative regulation of translation

	Cellular Component
GO:0005737	cytoplasm
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

External links

PDB	RCSB:8ury, PDBe:8ury, PDBj:8ury
PDBsum	8ury
PubMed	39117885
UniProt	P0AA12\|RL13_ECO57 Large ribosomal subunit protein uL13 (Gene Name=rplM)