Structure of PDB 5t2c Chain s

Receptor sequence
>5t2cs (length=139) Species: 9606 (Homo sapiens) [Search protein sequence]
VFRRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTQVRRQAMP
FKCMQLTDFILKFPHSAHQKYVRQAWQKADINTKWAATRWAKKIEARERK
AKMTDFDRFKVMKAKKMRNRIIKNEVKKLQKAALLKASP
3D structure
PDB5t2c Structures and stabilization of kinetoplastid-specific split rRNAs revealed by comparing leishmanial and human ribosomes.
Chains
Resolution3.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna s F3 R4 F17 P19 N34 Q44 R46 Q48 K53 Q56 P65 H69 Q70 K71 Y72 R74 R90 W91 K94 R98 K101 M113 K114 K116 K117 M118 N120 F2 R3 F16 P18 N33 Q43 R45 Q47 K52 Q55 P64 H68 Q69 K70 Y71 R73 R89 W90 K93 R97 K100 M112 K113 K115 K116 M117 N119
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0045296 cadherin binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006364 rRNA processing
GO:0006412 translation
GO:0042273 ribosomal large subunit biogenesis
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0014069 postsynaptic density
GO:0016020 membrane
GO:0022625 cytosolic large ribosomal subunit
GO:0022626 cytosolic ribosome
GO:0045202 synapse
GO:0070062 extracellular exosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5t2c, PDBe:5t2c, PDBj:5t2c
PDBsum5t2c
PubMed27752045
UniProtP50914|RL14_HUMAN Large ribosomal subunit protein eL14 (Gene Name=RPL14)

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