Structure of PDB 5lzv Chain r

Receptor sequence

>5lzvr (length=124) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

SAHLQWMVVRNCSSFLIKRNKQTYSTEPNNLKARNSFRYNGLIHRKTVGV
EPAADGKGVVVVMKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNK
YHPDLRMAAIRRASAILRSQKPVM

3D structure

PDB

5lzv Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes.

Chain

Resolution

3.35 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	r	W7 R11 N12 S15 K19 K22 Q23 T24 K33 N36 S37 F38 R39 R46 R66 R67 S68 R71 T81 I82 K84 N85 R87 S92 R94 H95 R98 K99 N100 K101 D105 R107 M108 R112 R119 K122	W6 R10 N11 S14 K18 K21 Q22 T23 K32 N35 S36 F37 R38 R45 R65 R66 S67 R70 T80 I81 K83 N84 R86 S91 R93 H94 R97 K98 N99 K100 D104 R106 M107 R111 R118 K121

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005737	cytoplasm
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

External links

PDB	RCSB:5lzv, PDBe:5lzv, PDBj:5lzv
PDBsum	5lzv
PubMed	27863242
UniProt	G1U7L1\|RL28_RABIT Large ribosomal subunit protein eL28 (Gene Name=RPL28)