Structure of PDB 6zu9 Chain q

Receptor sequence
>6zu9q (length=636) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
KSAKEKLLDEMQDVYNKISQAENSWLTISNEFDLISRLLVRAQQQNWGTP
NIFIKVVAQVEDAVNNKAVARAYNTTKQRVKKVSRENEDSMAQEDFFTRL
QTIIDSRGKKTVNQQSLISTLEELLTVAEKPYEFIMAYLTLIPSRFDASA
NLSYQPIDQWKSSFNDISKLLSILDQTIDTYQVNEFADPIDFIEDEPKED
SDGVKRILGSIFSFVERLDDEFMKSLLNIDPHSSDYLIRLRDEQSIYNLI
LRTQLYFEATLKDEHDLERALTRPFVKRLDHIYYKSENLIKIMETAAWNI
IPAQFKSKFTSKDQLDSADYVDNLIDGLSTILSKQNNIAVQKRAILYNIY
YTALNKDFQTAKDMLLTSQVQTNINQFDSSLQILFNRVVVQLGLSAFKLC
LIEECHQILNDLLSSSHLREILGQQSLHRISLNSSNNASADERARQCLPY
HQHINLDLIDVVFLTCSLLIEIPRMTAFYSGIKVKRIPYSPKSIRRSLEH
YDKLSFQGPPETLRDYVLFAAKSMQKGNWRDSVKYLREIKSWALLPNMET
VLNSLTERVQVESLKTYFFSFKRFYSSFSVAKLAELFDLPENKVVEVLQS
VIAELEIPAKLNDEKTIFVVEKGDEITKLEEAMVKL
3D structure
PDB6zu9 A structural inventory of native ribosomal ABCE1-43S pre-initiation complexes.
Chainq
Resolution6.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna q A115 K189 A190 V191 A192 R193 A194 N196 K267 T269 N309 L310 S311 A3 K67 A68 V69 A70 R71 A72 N74 K109 T111 N151 L152 S153
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003729 mRNA binding
GO:0003743 translation initiation factor activity
GO:0005515 protein binding
GO:0031369 translation initiation factor binding
Biological Process
GO:0001732 formation of cytoplasmic translation initiation complex
GO:0002183 cytoplasmic translational initiation
GO:0006412 translation
GO:0006413 translational initiation
Cellular Component
GO:0005737 cytoplasm
GO:0005852 eukaryotic translation initiation factor 3 complex
GO:0010494 cytoplasmic stress granule
GO:0016282 eukaryotic 43S preinitiation complex
GO:0033290 eukaryotic 48S preinitiation complex
GO:0043614 multi-eIF complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6zu9, PDBe:6zu9, PDBj:6zu9
PDBsum6zu9
PubMed33289941
UniProtP32497|EIF3C_YEAST Eukaryotic translation initiation factor 3 subunit C (Gene Name=NIP1)

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