Structure of PDB 8xr6 Chain p
Receptor sequence
>8xr6p (length=192) Species:
173977
(Chroomonas placoidea) [
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LYKDGIIQGLGVEAIPGAGRPANLDGTLVGDVGFDPLGFSNWLDLRWARE
AEIKHGRVAMLAATGMIVQDAYKFPGFEGEFGGAAMMKLHNLAVEQGAMQ
QLLLWLGLLEIISGVPAIIQTLNGSERQPGDFGFDPLNCGANPDTLARRQ
LTELKNGRLAMIAVGGMVHHYLLVGRGPIEFITNIPNFKNPL
3D structure
PDB
8xr6
Cryo-EM structure of cryptophyte photosystem II
Chain
p
Resolution
2.53 Å
3D
structure
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Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
CLA
p
I151 G172
I112 G133
BS02
II0
p
Q140 W144
Q101 W105
BS03
CLA
p
A53 I54 P55 F73
A14 I15 P16 F34
BS04
CLA
p
L63 G69 D70 V71 F73 A87 R88 A90 E91 H94 R197 M200
L24 G30 D31 V32 F34 A48 R49 A51 E52 H55 R158 M161
BS05
CLA
p
W86 A90 H94
W47 A51 H55
BS06
CLA
p
L100 A101 G104 V107 Q108 K112 F113 F116 F120 L128 A137 M138
L61 A62 G65 V68 Q69 K73 F74 F77 F81 L89 A98 M99
BS07
CLA
p
F116 Q135 A137 Q140 L141 W144
F77 Q96 A98 Q101 L102 W105
BS08
CLA
p
H129 V133 M138 Q139 L141 L142
H90 V94 M99 Q100 L102 L103
BS09
CLA
p
W86 A90 K93 H94 L145 G146 E149 I157
W47 A51 K54 H55 L106 G107 E110 I118
BS10
CLA
p
R96 M99 D170 F171 G172 F173 L185 R188 Q189 T191 E192
R57 M60 D131 F132 G133 F134 L146 R149 Q150 T152 E153
BS11
CLA
p
R187 L190 T191 K194 N195 L198
R148 L151 T152 K155 N156 L159
BS12
KC2
p
R187 R188 T191 N195 L198
R148 R149 T152 N156 L159
BS13
CLA
p
I201 A202 G205 H208 H209 L212 F220 P225 F227
I162 A163 G166 H169 H170 L173 F181 P186 F188
BS14
CLA
p
H208 L211
H169 L172
BS15
II0
p
M99 T103 F173 D174 P175 L176 C178 L198 A202 M206 P217 I221
M60 T64 F134 D135 P136 L137 C139 L159 A163 M167 P178 I182
BS16
II0
p
F73 D74 P75 L76 F78 A101 M105 Q108 M125 M200
F34 D35 P36 L37 F39 A62 M66 Q69 M86 M161
BS17
II0
p
K194 R197 L198 I201
K155 R158 L159 I162
BS18
II0
p
K93 V97 L100 G115 F116 E119 Q135 L141 L145
K54 V58 L61 G76 F77 E80 Q96 L102 L106
BS19
IHT
p
M126 I201 G204 V207
M87 I162 G165 V168
BS20
CLA
p
I224 P225 F227
I185 P186 F188
External links
PDB
RCSB:8xr6
,
PDBe:8xr6
,
PDBj:8xr6
PDBsum
8xr6
PubMed
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