Structure of PDB 8s8e Chain p

Receptor sequence
>8s8ep (length=544) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
QEDFFTRLQTIIDSRGKKTVNQQSLISTLEELLTVAEKPYEFIMAYLTLI
PSRFDASANLSYQPIDQWKSSFNDISKLLSILDQTIDTYQVNEFADPIDF
IEDEPKEDSDGVKRILGSIFSFVERLDDEFMKSLLNIDPHSSDYLIRLRD
EQSIYNLILRTQLYFEATLKDEHDLERALTRPFVKRLDHIYYKSENLIKI
METAAWNIIPAQFKSKFTSKDQLDSADYVDNLIDGLSTILSKQNNIAVQK
RAILYNIYYTALNKDFQTAKDMLLTSQVQTNINQFDSSLQILFNRVVVQL
GLSAFKLCLIEECHQILNDLLSSSHLREILGQQSLHRISLNSSNNASADE
RARQCLPYHQHINLDLIDVVFLTCSLLIEIPRMTAFYSGIKVKRIPYSPK
SIRRSLEHYDKLSFQGPPETLRDYVLFAAKSMQKGNWRDSVKYLREIKSW
ALLPNMETVLNSLTERVQVESLKTYFFSFKRFYSSFSVAKLAELFDLPEN
KVVEVLQSVIAELEIPAKLNDEKTIFVVEKGDEITKLEEAMVKL
3D structure
PDB8s8e Structural basis of AUC codon discrimination during translation initiation in yeast.
Chainp
Resolution3.85 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna p N309 S311 N595 D599 N59 S61 N345 D349
External links
PDB RCSB:8s8e, PDBe:8s8e, PDBj:8s8e
PDBsum8s8e
PubMed39193907
UniProtP32497|EIF3C_YEAST Eukaryotic translation initiation factor 3 subunit C (Gene Name=NIP1)

[Back to BioLiP]