Structure of PDB 5dc3 Chain o9

Receptor sequence
>5dc3o9 (length=50) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
AAQKSFRIKQKMAKAKKQNRPLPQWIRLRTNNTIRYNAKRRNWRRTKMNI
3D structure
PDB5dc3 Crystal Structure of Hypusine-Containing Translation Factor eIF5A Bound to a Rotated Eukaryotic Ribosome.
Chaino9
Resolution3.25 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna o9 A2 A3 Q4 K5 F7 K10 M13 P22 Y37 A39 K40 R41 R42 W44 R45 K48 M49 A1 A2 Q3 K4 F6 K9 M12 P21 Y36 A38 K39 R40 R41 W43 R44 K47 M48
BS02 rna o9 F7 R8 Q11 K12 K15 K18 Q19 R21 P24 W26 I27 L29 R30 T31 I35 K40 F6 R7 Q10 K11 K14 K17 Q18 R20 P23 W25 I26 L28 R29 T30 I34 K39
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:5dc3, PDBe:5dc3, PDBj:5dc3
PDBsum5dc3
PubMed27196944
UniProtP04650|RL39_YEAST Large ribosomal subunit protein eL39 (Gene Name=RPL39)

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