Structure of PDB 5fcj Chain o5

Receptor sequence
>5fcjo5 (length=119) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
AGVKAYELRTKSKEQLASQLVDLKKELAELKVQKLSRPSLPKIKTVRKSI
ACVLTVINEQQREAVRQLYKGKKYQPKDLRAKKTRALRRALTKFEASQVT
EKQRKKQIAFPQRKYAIKA
3D structure
PDB5fcj Crystal Structures of the uL3 Mutant Ribosome: Illustration of the Importance of Ribosomal Proteins for Translation Efficiency.
Chaino5
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna o5 K74 Y75 R81 R86 R90 T93 K94 F95 K103 K106 K73 Y74 R80 R85 R89 T92 K93 F94 K102 K105
BS02 rna o5 A6 Y7 R10 K35 S40 L41 K45 K49 A52 C53 L55 T56 N59 R63 K78 R81 A82 K83 T85 R86 R89 A5 Y6 R9 K34 S39 L40 K44 K48 A51 C52 L54 T55 N58 R62 K77 R80 A81 K82 T84 R85 R88
Gene Ontology
Molecular Function
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:0030687 preribosome, large subunit precursor
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:5fcj, PDBe:5fcj, PDBj:5fcj
PDBsum5fcj
PubMed26906928
UniProtP0CX84|RL35A_YEAST Large ribosomal subunit protein uL29A (Gene Name=RPL35A)

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