Structure of PDB 7k54 Chain o

Receptor sequence
>7k54o (length=116) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
DKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNGSEVLVAA
STVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHG
RVQALADAAREAGLQF
3D structure
PDB7k54 Structural basis for +1 ribosomal frameshifting during EF-G-catalyzed translocation.
Chaino
Resolution3.2 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna o R9 R10 T12 R13 K17 L21 F92 Y99 R111 R8 R9 T11 R12 K16 L20 F91 Y98 R110
BS02 rna o K3 K4 R15 R25 H29 R33 H34 Y36 I40 G44 E46 V47 E55 K56 K63 Y64 N67 K68 H100 G101 R102 K2 K3 R14 R24 H28 R32 H33 Y35 I39 G43 E45 V46 E54 K55 K62 Y63 N66 K67 H99 G100 R101
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0008097 5S rRNA binding
GO:0019843 rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7k54, PDBe:7k54, PDBj:7k54
PDBsum7k54
PubMed34330903
UniProtP0C018|RL18_ECOLI Large ribosomal subunit protein uL18 (Gene Name=rplR)

[Back to BioLiP]