Structure of PDB 3jbu Chain o

Receptor sequence
>3jbuo (length=116) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
DKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNGSEVLVAA
STVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHG
RVQALADAAREAGLQF
3D structure
PDB3jbu Mechanisms of ribosome stalling by SecM at multiple elongation steps
Chaino
Resolution3.64 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna o K3 R25 R30 T31 R33 Y36 Q38 G44 S45 V47 V54 Y64 N67 K68 Q98 H100 G101 R102 K2 R24 R29 T30 R32 Y35 Q37 G43 S44 V46 V53 Y63 N66 K67 Q97 H99 G100 R101
BS02 rna o R9 R13 R16 S91 R94 Y99 R111 F117 R8 R12 R15 S90 R93 Y98 R110 F116
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0008097 5S rRNA binding
GO:0019843 rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:3jbu, PDBe:3jbu, PDBj:3jbu
PDBsum3jbu
PubMed26670735
UniProtP0C018|RL18_ECOLI Large ribosomal subunit protein uL18 (Gene Name=rplR)

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