Structure of PDB 8ury Chain n

Receptor sequence

>8uryn (length=177) Species: 562 (Escherichia coli) [Search protein sequence]

AKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLD
NAAADLAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFE
RLITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRG
LDITITTTAKSDEEGRALLAAFDFPFR

3D structure

PDB

8ury Structural basis of RfaH-mediated transcription-translation coupling

Chain

Resolution

3.1 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	rna	n	K78 R80	K77 R79
BS02	rna	n	K33 T35 N37 M38 G39 G41 T68 A70 R71 K72 V74 G76 F77 I79 I85 K88 S121 D123 R125 N127 S129 M130 G131 R133 G151 L152 D153 T155 T157	K32 T34 N36 M37 G38 G40 T67 A69 R70 K71 V73 G75 F76 I78 I84 K87 S120 D122 R124 N126 S128 M129 G130 R132 G150 L151 D152 T154 T156
BS03	rna	n	S24 M26 Q27 Q63 K64 L66 T90 R92	S23 M25 Q26 Q62 K63 L65 T89 R91

Gene Ontology

	Molecular Function
GO:0000049	tRNA binding
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome
GO:0019843	rRNA binding

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component

External links

PDB	RCSB:8ury, PDBe:8ury, PDBj:8ury
PDBsum	8ury
PubMed	39117885
UniProt	A0A140N5A3

[Back to BioLiP]