Structure of PDB 8olb Chain n

Receptor sequence

>8olbn (length=277) Species: 10912 (Rotavirus) [Search protein sequence]

AQNYGINLPITGSMDTAYANSTQEETFLTSTLCLYYPTEAATEINDNSWK
DTLSQLFLTKGWPTGSVYFKEYTNIASFSVDPQLYCDYNVVLMKYDATLQ
LDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSSCTIKVCPLN
TQTLGIGCLTTDATTFEEVATAEKLVITDVVDGVNHKLDVTTATCTIRNC
KKLGPRENVAVIQVGGSDILDITADPTTAPQTERMMRINWKKWWQVFYTV
VDYVDQIIQVMSKRSRSLNSAAFYYRV

3D structure

PDB

8olb Structural basis of rotavirus spike proteolytic activation

Chain

Resolution

3.4 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	CA	n	Q177 D228 V229 D231	Q128 D179 V180 D182
BS02	CA	n	G206 T214	G157 T165

External links

PDB	RCSB:8olb, PDBe:8olb, PDBj:8olb
PDBsum	8olb
PubMed
UniProt	A0A060IEQ1

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