Structure of PDB 5gak Chain n

Receptor sequence
>5gakn (length=50) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
AAQKSFRIKQKMAKAKKQNRPLPQWIRLRTNNTIRYNAKRRNWRRTKMNI
3D structure
PDB5gak Structure of the hypusinylated eukaryotic translation factor eIF-5A bound to the ribosome.
Chainn
Resolution3.88 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna n A2 Q4 K5 K10 M13 P22 I35 R36 Y37 N38 A39 R41 R42 W44 R45 K48 M49 A1 Q3 K4 K9 M12 P21 I34 R35 Y36 N37 A38 R40 R41 W43 R44 K47 M48
BS02 rna n S6 F7 Q11 K12 K15 K18 Q19 L23 P24 W26 I27 L29 R30 T31 K40 S5 F6 Q10 K11 K14 K17 Q18 L22 P23 W25 I26 L28 R29 T30 K39
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:5gak, PDBe:5gak, PDBj:5gak
PDBsum5gak
PubMed26715760
UniProtP04650|RL39_YEAST Large ribosomal subunit protein eL39 (Gene Name=RPL39)

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