Structure of PDB 4u53 Chain m0

Receptor sequence

>4u53m0 (length=213) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]

ARRPARCYRYQKNKPYPKSRYNRAVPDSKIRIYDLGKKKATVDEFPLCVH
LVSNELEQLSSEALEAARICANKYMTTVSGRDAFHLRVRVHPFHVLRINK
MLLQQGMRGAWGKPHGLAARVDIGQIIFSVRTKDSNKDVVVEGLRRARYK
FPGQQKIILSKKWGFTNLDRPEYLKKREAGEVKDDGAFVKFLSKKGSLEN
NIREFPEYFAAQA

3D structure

PDB

4u53 ?

Chain

Resolution

3.3 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	rna	m0	R3 R4 A6 R7 C8 K13 N14 K15 Y22 R24 K39 E63 A64 A67 R90 H92 F94 R98 N100 M102 M115 R116 G117 W119 G120 R154 Y157 K158 P160 D193 G194 A195 K198	R2 R3 A5 R6 C7 K12 N13 K14 Y21 R23 K38 E62 A63 A66 R89 H91 F93 R97 N99 M101 M107 R108 G109 W111 G112 R146 Y149 K150 P152 D185 G186 A187 K190
BS02	rna	m0	Y11 E56 L57 I131 K202 K203 G204 S205 L206	Y10 E55 L56 I123 K194 K195 G196 S197 L198
BS03	OHX	m0	Y216 A218	Y208 A210
BS04	OHX	m0	N100 Q113	N99 Q105

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome
GO:0005515	protein binding

	Biological Process
GO:0000027	ribosomal large subunit assembly
GO:0002181	cytoplasmic translation
GO:0006412	translation
GO:0006415	translational termination

	Cellular Component
GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Biological Process

View graph for
Cellular Component

External links

PDB	RCSB:4u53, PDBe:4u53, PDBj:4u53
PDBsum	4u53
PubMed	25209664
UniProt	P41805\|RL10_YEAST Large ribosomal subunit protein uL16 (Gene Name=RPL10)

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