Structure of PDB 8wmv Chain m

Receptor sequence

>8wmvm (length=174) Species: 52970 (Rhodomonas salina)

AMSESVPFLKKPEALDSSMAGYAGFDPLGLSSIADIKFLQESEIKHCRIA
MLAAAGSIAQDIFTFPGVSKVVGTAKMTGVHDVLVKQGAMGQILLWTSFL
EVFGTIALLETLDGKRAPGDFKFDPLGFSKNAETAKRYQLSEIKNGRLAM
LATGGMVHGYFITGKGPLELLTNF

3D structure

• PDB: 8wmv Growth phase-dependent reorganization of cryptophyte photosystem I antennae.
• Chain: m
• Resolution: 2.94 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	CLA	m	H117 V121 M126 G127	H81 V85 M90 G91
BS02	CLA	m	E40 S41 P43 F44 F61	E4 S5 P7 F8 F25
BS03	CLA	m	L51 Y58 A59 F61 D62 L66 L75 Q76 S78 E79 H82 R183 M186	L15 Y22 A23 F25 D26 L30 L39 Q40 S42 E43 H46 R147 M150
BS04	CLA	m	L75 H82	L39 H46
BS05	CLA	m	L88 A89 G92 Q96 F101 V104 V116 L120 M126	L52 A53 G56 Q60 F65 V68 V80 L84 M90
BS06	CLA	m	F101 P102 G103 V104	F65 P66 G67 V68
BS07	CLA	m	G124 A125 Q128 W132	G88 A89 Q92 W96
BS08	CLA	m	F74 S78 K81 H82 I85 S134 E137 T141 L144	F38 S42 K45 H46 I49 S98 E101 T105 L108
BS09	CLA	m	R84 M87 L88 F157 F159 D160 F164 Y174 E178	R48 M51 L52 F121 F123 D124 F128 Y138 E142
BS10	CLA	m	L176 S177 K180 N181	L140 S141 K144 N145
BS11	KC2	m	Y174 N181	Y138 N145
BS12	CLA	m	L187 A188 G191 H194	L151 A152 G155 H158
BS13	CLA	m	H194 F197 I198	H158 F161 I162
BS14	II0	m	M87 F159 D160 P161 L162 F164 L184 A185 A188 G191 M192 P203 L206	M51 F123 D124 P125 L126 F128 L148 A149 A152 G155 M156 P167 L170
BS15	II0	m	F61 D62 P63 L64 A89 M113 M186	F25 D26 P27 L28 A53 M77 M150
BS16	II0	m	R183 L187	R147 L151
BS17	IHT	m	H117 D118 G190 V193	H81 D82 G154 V157
BS18	II0	m	K81 I85 I129 T133	K45 I49 I93 T97
BS19	CLA	m	F139 F157	F103 F121
BS20	II0	m	Q128 L131 W132	Q92 L95 W96

External links

• PDB: RCSB:8wmv, PDBe:8wmv, PDBj:8wmv
• PDBsum: 8wmv
• PubMed: 38734819